##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043295_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2136694 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.30647860666993 33.0 31.0 34.0 31.0 34.0 2 32.605140464661766 34.0 31.0 34.0 31.0 34.0 3 32.69648250989613 34.0 31.0 34.0 31.0 34.0 4 36.19263731727613 37.0 37.0 37.0 35.0 37.0 5 36.17435673989818 37.0 37.0 37.0 35.0 37.0 6 36.33367623066288 37.0 37.0 37.0 35.0 37.0 7 36.28153352796423 37.0 37.0 37.0 35.0 37.0 8 36.18505176688847 37.0 37.0 37.0 35.0 37.0 9 37.78072761003681 39.0 38.0 39.0 35.0 39.0 10 37.567715826412204 39.0 37.0 39.0 35.0 39.0 11 37.22209731482374 39.0 37.0 39.0 35.0 39.0 12 37.22821751734221 39.0 37.0 39.0 34.0 39.0 13 37.207848667146536 39.0 37.0 39.0 34.0 39.0 14 38.49882996816577 40.0 37.0 41.0 34.0 41.0 15 38.56549042586351 40.0 37.0 41.0 35.0 41.0 16 38.4592449831375 40.0 37.0 41.0 34.0 41.0 17 38.39379246630542 40.0 37.0 41.0 34.0 41.0 18 38.20064969527691 40.0 37.0 41.0 34.0 41.0 19 38.01055368714472 40.0 37.0 41.0 34.0 41.0 20 37.73568185243184 40.0 35.0 41.0 34.0 41.0 21 37.67183836337819 39.0 35.0 41.0 34.0 41.0 22 37.64345105101619 39.0 35.0 41.0 34.0 41.0 23 37.6153679469311 39.0 35.0 41.0 34.0 41.0 24 37.54168168207521 39.0 35.0 41.0 34.0 41.0 25 37.49926756007177 39.0 35.0 41.0 34.0 41.0 26 37.45983374315649 39.0 35.0 41.0 34.0 41.0 27 37.43902683304207 39.0 35.0 41.0 34.0 41.0 28 37.35250906306659 39.0 35.0 41.0 34.0 41.0 29 37.295761115068416 39.0 35.0 41.0 33.0 41.0 30 37.177452176118805 39.0 35.0 41.0 33.0 41.0 31 37.03376711873577 39.0 35.0 41.0 33.0 41.0 32 36.755095488638055 39.0 35.0 41.0 33.0 41.0 33 36.36203312219719 39.0 35.0 41.0 31.0 41.0 34 36.02561995306768 38.0 35.0 41.0 30.0 41.0 35 35.87054206170841 38.0 35.0 41.0 30.0 41.0 36 35.80408425352437 38.0 35.0 41.0 30.0 41.0 37 35.66725090256256 38.0 35.0 41.0 29.0 41.0 38 35.552645816387376 38.0 35.0 41.0 29.0 41.0 39 35.472951672069094 38.0 35.0 40.0 29.0 41.0 40 35.382195578777306 38.0 35.0 40.0 29.0 41.0 41 35.28888694403597 37.0 35.0 40.0 28.0 41.0 42 35.19225822696184 37.0 35.0 40.0 27.0 41.0 43 35.07558031238914 37.0 35.0 40.0 27.0 41.0 44 34.96360732982823 37.0 35.0 40.0 26.0 41.0 45 34.90116647493745 36.0 35.0 40.0 26.0 41.0 46 34.80165339538558 36.0 35.0 40.0 25.0 41.0 47 34.66350960876944 36.0 35.0 40.0 25.0 41.0 48 34.5885503492779 36.0 35.0 40.0 24.0 41.0 49 34.513266756961926 35.0 34.0 40.0 25.0 41.0 50 34.43288791001426 35.0 34.0 40.0 25.0 41.0 51 34.00111106222978 35.0 34.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 8.0 14 18.0 15 40.0 16 95.0 17 181.0 18 444.0 19 867.0 20 1554.0 21 2666.0 22 4057.0 23 6213.0 24 10186.0 25 18284.0 26 29133.0 27 36975.0 28 39526.0 29 40378.0 30 41351.0 31 45142.0 32 52338.0 33 67774.0 34 159872.0 35 221652.0 36 195111.0 37 200677.0 38 310606.0 39 651392.0 40 152.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.13351186459081 17.11990579839696 23.249328167720787 30.497254169291438 2 35.441995905824605 19.107087865646648 23.390153199288246 22.060763029240498 3 25.246291701104607 20.739095069298646 34.29812598341176 19.716487246184993 4 23.15801888337778 23.30988901546033 32.11891829152888 21.41317380963301 5 21.33286282453173 31.241628422226114 29.23872112712443 18.18678762611773 6 77.73059689408029 1.9709888266639959 17.521647928996853 2.7767663502588578 7 77.46467205879738 1.8508499579256554 16.189964496554023 4.494513486722947 8 68.46361715809563 3.1985862271340677 21.358135512151012 6.97966110261928 9 42.58284059392688 14.400705014382032 25.64471094129529 17.371743450395797 10 30.152609592201784 15.509614385588202 34.53845052216181 19.799325500048205 11 27.032930311967927 12.317393131632326 39.134850381009166 21.51482617539058 12 22.495687262659043 13.658483620022333 41.1701909585556 22.67563815876302 13 17.616046097382217 16.335469655458386 43.730688624576096 22.3177956225833 14 18.021485528578264 16.483595685671414 43.44080153732823 22.054117248422095 15 22.205659771591066 14.00097533853701 42.380050676418804 21.41331421345312 16 21.082990826014395 17.82337573840709 39.02510139495875 22.06853204061976 17 21.757443976535715 18.86760574981724 38.693795180779276 20.68115509286777 18 21.51384334864983 25.136027901047132 34.99892825083985 18.35120049946319 19 23.48707863643554 21.466433658726984 33.186502138350185 21.859985566487293 20 21.933931578410384 25.827329509981308 33.65512328859444 18.58361562301387 21 19.613898854960045 20.05940017615999 35.84626530518643 24.480435663693537 22 21.462455550490617 21.42950745403881 33.592549986100025 23.51548700937055 23 22.519555912077255 19.14181441048648 36.170036514353484 22.168593163082782 24 24.476551158003907 17.64684133525905 33.12959178993342 24.747015716803624 25 18.805594062603255 18.43216670239164 36.7448497538721 26.017389481133 26 17.46876249008983 17.952219643992073 36.62134119345119 27.957676672466903 27 21.395950941033202 21.009746833191837 35.13048663028024 22.463815595494722 28 23.612459247791215 21.88848754196904 31.063221968143313 23.435831242096437 29 22.849645293149138 18.95301807371575 33.5764035467877 24.620933086347414 30 26.435558858685425 19.788888816086907 30.330594834824264 23.444957490403397 31 28.674578577933946 17.912906574362076 29.027787788050137 24.384727059653837 32 25.29463741649483 19.50967241916718 28.503051911036398 26.6926382533016 33 24.390811225191815 20.894568899430617 31.771512439310452 22.94310743606712 34 23.182917160810113 22.529524583304863 31.41923925466164 22.868319001223387 35 25.380658156947135 25.397693820453465 27.856164710529445 21.365483312069955 36 27.715526884055464 22.300806760350337 27.740425161487792 22.243241194106407 37 25.252890680649635 25.741776782262694 29.468842988280024 19.536489548807644 38 24.8829734159407 22.04344655809395 29.133465063317445 23.940114962647904 39 25.828078330355215 20.19442184982969 32.00631442780295 21.971185392012146 40 21.997768515285763 20.000477372988364 33.946508016590116 24.055246095135757 41 22.098391253029213 22.83920860918784 29.57292902025278 25.489471117530165 42 21.517025835238925 18.24674005730348 31.984458233139605 28.251775874317985 43 24.195696716516263 18.433055926585652 32.288666510038404 25.08258084685968 44 22.86462170062723 19.719950540414306 32.91566316936351 24.499764589594957 45 23.51398936862274 20.909451704361974 31.972851517344086 23.603707409671202 46 23.348921277450117 20.156840427314346 31.859171224330673 24.635067070904864 47 21.504295888882545 20.50106379294368 33.425422638899164 24.56921767927462 48 23.257705595653846 18.51551977026191 30.885470731887672 27.34130390219657 49 22.148234609167247 17.063697469080736 34.82347027697929 25.96459764477272 50 21.352191750433146 17.29854625884661 36.12150359386978 25.227758396850465 51 20.09932166234379 16.2091998199087 35.50962374584288 28.181854771904636 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 513.0 1 3198.0 2 5883.0 3 70131.5 4 134380.0 5 77265.5 6 20151.0 7 17834.5 8 15518.0 9 15076.5 10 14635.0 11 14087.0 12 13539.0 13 12784.0 14 12029.0 15 11068.0 16 10107.0 17 9582.0 18 9057.0 19 8342.5 20 7628.0 21 7230.0 22 6832.0 23 6732.0 24 6632.0 25 6409.5 26 6992.5 27 7798.0 28 8089.5 29 8381.0 30 9453.5 31 10526.0 32 12466.5 33 14407.0 34 16704.5 35 19002.0 36 21139.0 37 23276.0 38 25040.0 39 26804.0 40 30102.5 41 33401.0 42 39978.5 43 46556.0 44 53425.5 45 60295.0 46 70188.0 47 80081.0 48 110502.0 49 140923.0 50 175234.0 51 209545.0 52 219739.0 53 229933.0 54 209450.0 55 188967.0 56 169982.5 57 150998.0 58 137758.0 59 124518.0 60 120326.5 61 116135.0 62 109899.0 63 103663.0 64 99195.5 65 94728.0 66 77994.5 67 61261.0 68 49772.0 69 38283.0 70 32355.0 71 26427.0 72 24732.5 73 23038.0 74 19727.0 75 12541.5 76 8667.0 77 6719.5 78 4772.0 79 3589.5 80 2407.0 81 1812.0 82 1217.0 83 960.0 84 703.0 85 503.5 86 304.0 87 198.5 88 93.0 89 72.0 90 51.0 91 33.0 92 15.0 93 12.0 94 9.0 95 5.5 96 2.0 97 1.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2136694.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.74909479786696 #Duplication Level Percentage of deduplicated Percentage of total 1 74.30152861242368 22.104032183174166 2 10.04435917117595 5.976211863342755 3 3.664249749823961 3.270243395117199 4 1.8247399262882935 2.1713744419441285 5 1.2143271938599798 1.806256740288415 6 0.8576966278595926 1.5309418974003504 7 0.6947655657847476 1.446805267517689 8 0.5870127222442285 1.3970477697278 9 0.5163694441402217 1.3825371190004387 >10 5.854715802241022 35.862455707055446 >50 0.287343240734104 5.706320472661297 >100 0.1413022773386398 7.1717736423971585 >500 0.006509264513894203 1.3284028278252582 >1k 0.004286588826223012 2.560644518003776 >5k 4.762876473581124E-4 0.9506066883182455 >10k+ 3.1752509823874167E-4 5.334345466225845 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 100566 4.706616857631463 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 12377 0.5792593604886802 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 7361 0.3445041732695463 No Hit CCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCTGC 6901 0.3229755875197853 No Hit CTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCTGCT 5865 0.27448946830945375 No Hit CGCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCTG 4568 0.2137882167498013 No Hit GCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCTGC 3722 0.17419433947958857 No Hit CGTTCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTC 3182 0.14892165186030382 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 3009 0.1408250315674589 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 2876 0.13460046220937577 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTT 2745 0.1284694953980308 No Hit GGGCCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTC 2431 0.11377389556015041 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCC 2419 0.11321228027972184 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 2172 0.10165236575756754 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCT 2159 0.10104394920376994 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.28399012680337005 0.0 2 0.0 0.0 0.0 0.9259631936065716 0.0 3 0.0 0.0 0.0 1.5801513927590942 0.0 4 0.0 0.0 0.0 2.0443732233066596 0.0 5 0.0 0.0 0.0 4.268042124890134 0.0 6 0.0 0.0 0.0 5.167562599043195 0.0 7 0.0 0.0 0.0 7.633100481397898 0.0 8 0.0 0.0 0.0 10.594731861464487 0.0 9 0.0 0.0 0.0 13.523134337439053 0.0 10 0.0 0.0 0.0 15.10122647416991 0.0 11 0.0 0.0 0.0 16.29943267496422 0.0 12 0.0 0.0 0.0 17.13141891164575 0.0 13 0.0 0.0 0.0 17.58047712962174 0.0 14 0.0 0.0 0.0 17.88229854157872 0.0 15 0.0 0.0 0.0 18.578935495676966 0.0 16 0.0 0.0 0.0 19.33412084275989 0.0 17 0.0 0.0 0.0 20.27524764893803 0.0 18 0.0 0.0 0.0 20.825771027578117 0.0 19 0.0 0.0 0.0 21.43339195972844 0.0 20 0.0 0.0 0.0 22.10035690651071 0.0 21 0.0 0.0 0.0 22.78477872825964 0.0 22 0.0 0.0 0.0 23.416174707281435 0.0 23 0.0 0.0 0.0 23.999318573459746 0.0 24 0.0 0.0 0.0 24.4705137937393 0.0 25 0.0 0.0 0.0 24.934127207733066 0.0 26 0.0 0.0 0.0 25.398770249740956 0.0 27 0.0 0.0 0.0 25.887188338620316 0.0 28 0.0 0.0 0.0 26.35899197545367 0.0 29 0.0 0.0 0.0 26.85073295474223 0.0 30 0.0 0.0 0.0 27.30405008859481 0.0 31 0.0 0.0 0.0 27.77547931524121 0.0 32 0.0 0.0 0.0 28.31097948512983 0.0 33 4.6801273369045826E-5 0.0 0.0 28.828648369864847 0.0 34 4.6801273369045826E-5 0.0 0.0 29.367799039076257 0.0 35 4.6801273369045826E-5 0.0 0.0 29.845967649087797 0.0 36 4.6801273369045826E-5 0.0 0.0 30.35605472753703 0.0 37 4.6801273369045826E-5 0.0 0.0 31.013519015825384 0.0 38 4.6801273369045826E-5 0.0 0.0 31.69344791533088 0.0 39 4.6801273369045826E-5 0.0 0.0 32.44240869305572 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 25305 0.0 44.377594 1 CTAGCGG 565 0.0 42.610622 1 TAGTAGG 495 0.0 41.363636 1 CATGCGG 355 0.0 41.197186 1 CACTTAC 3420 0.0 41.18421 36 CCGGTAT 105 0.0 40.714287 42 TCGATTA 155 0.0 40.645164 40 ACTTACT 3445 0.0 40.624092 37 CGCACTT 3510 0.0 40.576923 34 CTTACGG 200 0.0 40.5 1 GCACTTA 3495 0.0 40.49356 35 CCAGTAG 1090 0.0 40.458714 25 CCGCACT 3530 0.0 40.347027 33 ACCCGCA 3565 0.0 40.26648 31 CCCGCAC 3595 0.0 40.243393 32 TGTACGG 235 0.0 40.212765 1 TACGGGT 140 0.0 40.17857 3 AATGCGG 280 0.0 40.17857 1 TAGCATA 1045 0.0 40.047848 29 AGGGCGA 815 0.0 40.030674 5 >>END_MODULE