##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043291_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2750598 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.366351607904896 33.0 31.0 34.0 31.0 34.0 2 32.654502766307544 34.0 31.0 34.0 31.0 34.0 3 32.7711141359079 34.0 31.0 34.0 31.0 34.0 4 36.226916474163076 37.0 37.0 37.0 35.0 37.0 5 36.21779518490161 37.0 37.0 37.0 35.0 37.0 6 36.35361910391849 37.0 37.0 37.0 35.0 37.0 7 36.311265768389276 37.0 37.0 37.0 35.0 37.0 8 36.22802605106235 37.0 37.0 37.0 35.0 37.0 9 37.80750113248101 39.0 38.0 39.0 35.0 39.0 10 37.58527636535764 39.0 37.0 39.0 35.0 39.0 11 37.263794636657195 39.0 37.0 39.0 35.0 39.0 12 37.27104869559274 39.0 37.0 39.0 35.0 39.0 13 37.2735837806906 39.0 37.0 39.0 35.0 39.0 14 38.5322024519759 40.0 37.0 41.0 35.0 41.0 15 38.611179459884724 40.0 37.0 41.0 35.0 41.0 16 38.506085949309934 40.0 37.0 41.0 34.0 41.0 17 38.43879949014723 40.0 37.0 41.0 34.0 41.0 18 38.31872196518721 40.0 37.0 41.0 34.0 41.0 19 38.155251694358824 40.0 37.0 41.0 34.0 41.0 20 37.87208527018488 40.0 35.0 41.0 34.0 41.0 21 37.84991045583542 40.0 35.0 41.0 34.0 41.0 22 37.822551677853326 40.0 35.0 41.0 34.0 41.0 23 37.80716047928487 40.0 35.0 41.0 34.0 41.0 24 37.74194338831047 40.0 35.0 41.0 34.0 41.0 25 37.70582724193066 40.0 35.0 41.0 34.0 41.0 26 37.67221091558999 39.0 35.0 41.0 34.0 41.0 27 37.665817033241495 39.0 35.0 41.0 34.0 41.0 28 37.55999059113691 39.0 35.0 41.0 34.0 41.0 29 37.504110742464 39.0 35.0 41.0 34.0 41.0 30 37.40200058314592 39.0 35.0 41.0 34.0 41.0 31 37.29387245973421 39.0 35.0 41.0 33.0 41.0 32 37.08421077889245 39.0 35.0 41.0 33.0 41.0 33 36.667705349891186 39.0 35.0 41.0 32.0 41.0 34 36.43560454853817 39.0 35.0 41.0 31.0 41.0 35 36.31654207557775 39.0 35.0 41.0 31.0 41.0 36 36.268656488516314 39.0 35.0 41.0 31.0 41.0 37 36.13318921921706 39.0 35.0 41.0 31.0 41.0 38 36.031189581320135 38.0 35.0 41.0 31.0 41.0 39 35.93098991564744 38.0 35.0 41.0 30.0 41.0 40 35.81760111801143 38.0 35.0 41.0 30.0 41.0 41 35.70785043834105 38.0 35.0 40.0 30.0 41.0 42 35.61666117695134 38.0 35.0 40.0 30.0 41.0 43 35.515290856751875 37.0 35.0 40.0 30.0 41.0 44 35.40443823488565 37.0 35.0 40.0 29.0 41.0 45 35.339577066514266 37.0 35.0 40.0 29.0 41.0 46 35.25114538729396 37.0 35.0 40.0 29.0 41.0 47 35.11204545338868 36.0 35.0 40.0 29.0 41.0 48 35.042828868486055 36.0 35.0 40.0 28.0 41.0 49 34.966173173978895 36.0 35.0 40.0 28.0 41.0 50 34.892777134281346 36.0 35.0 40.0 28.0 41.0 51 34.487339116802964 35.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 7.0 13 11.0 14 23.0 15 46.0 16 107.0 17 217.0 18 478.0 19 944.0 20 1617.0 21 2727.0 22 4364.0 23 6729.0 24 11222.0 25 19842.0 26 32312.0 27 41225.0 28 43832.0 29 43762.0 30 46041.0 31 52690.0 32 61950.0 33 82600.0 34 203085.0 35 292511.0 36 237711.0 37 260026.0 38 404077.0 39 900162.0 40 280.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.9354540358133 17.486415681244587 24.258288561251042 28.319841721691063 2 33.609818664886696 20.166342009992007 24.51496001960301 21.70887930551829 3 26.926108431693763 21.02677308716141 32.386121127114905 19.660997354029924 4 23.73851068022299 23.809949690939934 30.031033251678362 22.420506377158713 5 22.06596529191107 32.211504552828146 26.918473728258363 18.80405642700242 6 80.68071015830012 1.8847174323547096 14.901196030826751 2.5333763785184167 7 80.5529924765451 1.755909078680345 13.468416686116983 4.222681758657572 8 71.76453992913541 3.075149476586546 18.513719562073412 6.6465910322046335 9 43.671267120822456 15.044546676759019 23.87760770566982 17.406578496748708 10 30.303555808591444 15.86207799176761 32.339367657505754 21.494998542135203 11 26.916292384419677 12.62303688143451 37.2383023618864 23.222368372259414 12 22.79228007873197 13.9149741256265 39.433497733947306 23.85924806169422 13 18.08555812227014 17.784641739723508 41.865768825542666 22.26403131246369 14 18.195861409046323 17.245595321453735 42.28280541176864 22.2757378577313 15 22.55982153698941 14.540438115638853 41.24935741246085 21.65038293491088 16 21.528227679944507 17.982707760276128 37.48203118012883 23.007033379650537 17 21.389966836302506 20.109590714455546 37.66322814166229 20.83721430757966 18 22.614682334532347 25.696884822863975 32.910807031779996 18.777625810823682 19 24.550952192941317 21.922251088672354 30.88684715105588 22.63994956733045 20 22.742618150671237 25.786029074404908 32.890738668464095 18.58061410645976 21 20.559892794221472 20.163106349964625 33.764112385743026 25.51288847007087 22 21.918651871338525 21.524483039688096 31.970647837306654 24.586217251666728 23 22.972895348575108 19.453187997664507 34.69372841832939 22.880188235430985 24 25.795772410217705 17.728653914530586 31.37052379155369 25.105049883698015 25 18.84150282956652 19.006194289387253 34.64421191319124 27.508090967854994 26 17.90243430701251 19.746215186661228 34.83875142787132 27.51259907845494 27 21.53353561661864 22.252615613041236 33.25135116072941 22.96249760961071 28 24.021867244868204 22.700772704699123 30.280797121207826 22.996562929224844 29 23.032336968179283 21.055239624256252 33.58422423051278 22.32819917705168 30 26.301444267755592 22.17884983556303 28.988423608248098 22.531282288433278 31 27.328675437123128 21.409380796466802 28.96068418576615 22.30125958064392 32 27.76210845786989 23.010269039677915 26.547536208489937 22.68008629396226 33 20.770465186115892 26.028739932189293 32.661770276863436 20.539024604831386 34 21.763994593175738 25.273485983775164 31.01889116475763 21.94362825829147 35 24.005398098886133 29.15675064113331 28.103416057162846 18.734435202817714 36 26.202883881977662 26.14664156667023 25.949375372191792 21.701099179160313 37 23.124426033902445 29.771380623413528 26.5328848490401 20.57130849364393 38 23.74490928881647 24.351213808779036 25.634534744808217 26.269342157596277 39 24.79024561204509 21.51204937980759 31.089748483784252 22.607956524363065 40 20.908616962565958 21.504923656601218 33.13334045905654 24.45311892177628 41 21.725639297345523 24.762288055179273 27.90349589434734 25.608576753127863 42 20.81318316962348 19.155543630875904 31.061027456574898 28.97024574292572 43 22.73138422990201 20.028408367925813 32.50624046116517 24.73396694100701 44 23.495399909401517 21.47165816306127 31.43429174310459 23.59865018443262 45 22.970641293275136 23.221750324838453 30.40237068448388 23.40523769740253 46 22.814929698923653 22.578326603887593 29.699214498083688 24.907529199105067 47 20.808565991831596 23.300460481684347 32.1314492339484 23.759524292535662 48 23.445665269879495 20.66416102971063 29.578186270767304 26.311987429642574 49 21.688665519279805 19.227418910360583 33.576153258309645 25.507762312049962 50 20.906362907265983 19.00317676374374 35.07655426201866 25.013906066971618 51 19.795586268876804 17.690189551508436 34.07808047559113 28.436143704023635 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 558.0 1 3873.0 2 7188.0 3 73765.0 4 140342.0 5 80612.5 6 20883.0 7 18453.5 8 16024.0 9 15729.0 10 15434.0 11 14953.0 12 14472.0 13 13846.0 14 13220.0 15 12248.0 16 11276.0 17 10664.5 18 10053.0 19 9472.0 20 8891.0 21 8320.5 22 7750.0 23 7605.5 24 7461.0 25 7864.5 26 9020.5 27 9773.0 28 10601.5 29 11430.0 30 13117.0 31 14804.0 32 17010.5 33 19217.0 34 23988.5 35 28760.0 36 32332.5 37 35905.0 38 39821.0 39 43737.0 40 51300.5 41 58864.0 42 72839.5 43 86815.0 44 117800.5 45 148786.0 46 191520.0 47 234254.0 48 258683.5 49 283113.0 50 257896.5 51 232680.0 52 198393.0 53 164106.0 54 152648.5 55 141191.0 56 142161.5 57 143132.0 58 143553.5 59 143975.0 60 145104.5 61 146234.0 62 144931.5 63 143629.0 64 137803.5 65 131978.0 66 108652.0 67 85326.0 68 67742.0 69 50158.0 70 42991.0 71 35824.0 72 33444.0 73 31064.0 74 26276.0 75 16352.5 76 11217.0 77 8471.0 78 5725.0 79 4298.0 80 2871.0 81 2182.5 82 1494.0 83 1134.0 84 774.0 85 530.0 86 286.0 87 195.0 88 104.0 89 69.0 90 34.0 91 23.0 92 12.0 93 11.0 94 10.0 95 8.0 96 6.0 97 4.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2750598.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.287334717861555 #Duplication Level Percentage of deduplicated Percentage of total 1 72.91036691657399 19.166192195380802 2 10.7491757971505 5.65134364241663 3 3.9782917969143585 3.1373606421243196 4 1.933605586814784 2.0331734909170933 5 1.2249954981367304 1.6100933343696893 6 0.8360189678834049 1.318602626353933 7 0.6683896352243421 1.2299127444164168 8 0.5462997211556617 1.148861090103465 9 0.45145297196385986 1.0680745845048618 >10 5.90048625677597 35.37714352544255 >50 0.6117424970272256 10.504571911583648 >100 0.17505505100603183 7.992898371436703 >500 0.008387704974177962 1.5159818013789432 >1k 0.004753032818700845 2.3517874419520575 >5k 5.591803316118641E-4 0.9051866223442204 >10k+ 4.193852487088981E-4 4.9888159752745205 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 102585 3.729552628192124 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 21070 0.766015244684974 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 12101 0.43994069653217227 No Hit CCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC 7487 0.27219535533727574 No Hit CTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGCT 6549 0.2380936799924962 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 5500 0.19995651854614888 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 5096 0.18526880336566812 No Hit GCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC 4886 0.1776340999302697 No Hit CGCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTG 4463 0.16225562586753864 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 3444 0.12520913634053396 No Hit GGGCCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTC 2924 0.1063041564052617 No Hit CGTTCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTC 2848 0.10354112087626036 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2452557589295128 0.0 2 0.0 0.0 0.0 0.8230573860665935 0.0 3 0.0 0.0 0.0 1.389188823666708 0.0 4 0.0 0.0 0.0 1.769833323517286 0.0 5 0.0 0.0 0.0 3.8669409342986505 0.0 6 0.0 0.0 0.0 4.6562238465962675 0.0 7 0.0 0.0 0.0 7.02003709738755 0.0 8 0.0 0.0 0.0 9.796269756612926 0.0 9 0.0 0.0 0.0 12.347096885840825 0.0 10 0.0 0.0 0.0 13.814159684548596 0.0 11 0.0 0.0 0.0 14.88359985719469 0.0 12 0.0 0.0 0.0 15.604715774533393 0.0 13 0.0 0.0 0.0 15.98092487524531 0.0 14 0.0 0.0 0.0 16.230652389044128 0.0 15 0.0 0.0 0.0 16.88981814136417 0.0 16 0.0 0.0 0.0 17.589484177622467 0.0 17 0.0 0.0 0.0 18.51171999688795 0.0 18 0.0 0.0 0.0 19.040514099115903 0.0 19 0.0 0.0 0.0 19.62096969459005 0.0 20 3.635573064475434E-5 0.0 0.0 20.30453014217272 0.0 21 3.635573064475434E-5 0.0 0.0 21.026373174124316 0.0 22 3.635573064475434E-5 0.0 0.0 21.666924792354244 0.0 23 3.635573064475434E-5 0.0 0.0 22.286935422769886 0.0 24 3.635573064475434E-5 0.0 0.0 22.75432469593885 0.0 25 3.635573064475434E-5 0.0 0.0 23.213024949483714 0.0 26 7.271146128950868E-5 0.0 0.0 23.636169298458007 0.0 27 7.271146128950868E-5 0.0 0.0 24.10479466646889 0.0 28 7.271146128950868E-5 0.0 0.0 24.557278090073503 0.0 29 7.271146128950868E-5 0.0 0.0 25.031756730718193 0.0 30 7.271146128950868E-5 0.0 0.0 25.483622106901844 0.0 31 7.271146128950868E-5 0.0 0.0 25.936905356580642 0.0 32 7.271146128950868E-5 0.0 0.0 26.45464731669259 0.0 33 7.271146128950868E-5 0.0 0.0 26.941414194295206 0.0 34 7.271146128950868E-5 0.0 0.0 27.48987674680197 0.0 35 7.271146128950868E-5 0.0 0.0 27.94046967241305 0.0 36 7.271146128950868E-5 0.0 0.0 28.461447292552382 0.0 37 7.271146128950868E-5 0.0 0.0 29.10254424674198 0.0 38 7.271146128950868E-5 0.0 0.0 29.79755674947775 0.0 39 7.271146128950868E-5 0.0 0.0 30.570879496022318 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 26000 0.0 44.186543 1 ATTGCGG 565 0.0 42.212387 1 CATGCGG 405 0.0 41.666668 1 CACTTAC 5160 0.0 41.511627 36 CGCACTT 5170 0.0 41.431335 34 GCACTTA 5170 0.0 41.431335 35 ACCCGCA 5290 0.0 41.29962 31 CCGCACT 5205 0.0 41.239193 33 CCCGCAC 5305 0.0 41.140434 32 TCACGAC 570 0.0 41.05263 24 TAGTAGG 510 0.0 41.02941 1 ACTTACT 5225 0.0 40.909092 37 CTTACTG 5255 0.0 40.71836 38 CGACGGT 570 0.0 40.657894 27 GCGCGAC 2395 0.0 40.584553 8 TAGGGTA 1105 0.0 40.52036 4 AGGGTAC 1170 0.0 40.384617 5 TTATGAC 5900 0.0 40.00424 26 TATGCGG 445 0.0 39.943817 1 TCAACGC 6155 0.0 39.88221 15 >>END_MODULE