##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043286_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1379431 Sequences flagged as poor quality 0 Sequence length 52 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.24761948948516 33.0 31.0 34.0 31.0 34.0 2 32.584145201898465 34.0 31.0 34.0 31.0 34.0 3 32.66734399908368 34.0 31.0 34.0 31.0 34.0 4 36.18007279813198 37.0 35.0 37.0 35.0 37.0 5 36.08322634477549 37.0 35.0 37.0 35.0 37.0 6 36.32430473144362 37.0 37.0 37.0 35.0 37.0 7 36.25936273724456 37.0 37.0 37.0 35.0 37.0 8 36.220842506801716 37.0 37.0 37.0 35.0 37.0 9 37.74547548953155 39.0 38.0 39.0 35.0 39.0 10 37.56052966766732 39.0 37.0 39.0 35.0 39.0 11 37.220140768186305 39.0 37.0 39.0 34.0 39.0 12 37.24887000509631 39.0 37.0 39.0 34.0 39.0 13 37.225786574319415 39.0 37.0 39.0 34.0 39.0 14 38.625304926451555 40.0 38.0 41.0 34.0 41.0 15 38.74316004207532 40.0 38.0 41.0 35.0 41.0 16 38.7829315130659 41.0 38.0 41.0 35.0 41.0 17 38.7427888745432 40.0 38.0 41.0 35.0 41.0 18 38.48273164804909 40.0 38.0 41.0 35.0 41.0 19 38.207338388074504 40.0 37.0 41.0 34.0 41.0 20 37.9163234696045 40.0 35.0 41.0 34.0 41.0 21 37.84980111364759 40.0 35.0 41.0 34.0 41.0 22 37.811741942873546 40.0 35.0 41.0 34.0 41.0 23 37.79703950396939 40.0 35.0 41.0 34.0 41.0 24 37.71721818633915 39.0 35.0 41.0 34.0 41.0 25 37.65080094618723 39.0 35.0 41.0 34.0 41.0 26 37.61592207221673 39.0 35.0 41.0 34.0 41.0 27 37.654602513645116 40.0 35.0 41.0 34.0 41.0 28 37.64902412661453 40.0 35.0 41.0 34.0 41.0 29 37.61229956409563 40.0 35.0 41.0 34.0 41.0 30 37.5370699948022 40.0 35.0 41.0 33.0 41.0 31 37.37976528003213 40.0 35.0 41.0 33.0 41.0 32 37.109456725272956 40.0 35.0 41.0 33.0 41.0 33 36.82628054610923 40.0 35.0 41.0 32.0 41.0 34 36.5723526584512 40.0 35.0 41.0 31.0 41.0 35 36.33371803301506 40.0 35.0 41.0 30.0 41.0 36 36.26253650961882 40.0 35.0 41.0 30.0 41.0 37 36.21132191461552 40.0 35.0 41.0 30.0 41.0 38 36.12615781434519 39.0 35.0 41.0 30.0 41.0 39 36.11623270754391 39.0 35.0 41.0 30.0 41.0 40 36.089599987241115 39.0 35.0 41.0 30.0 41.0 41 36.10369420434947 39.0 35.0 41.0 30.0 41.0 42 36.05578894486205 39.0 35.0 41.0 30.0 41.0 43 35.95822407934866 39.0 35.0 41.0 29.0 41.0 44 35.81544781870206 39.0 35.0 41.0 29.0 41.0 45 35.72586812968535 39.0 35.0 41.0 27.0 41.0 46 35.69973634056361 39.0 35.0 41.0 27.0 41.0 47 35.61885081602487 39.0 35.0 41.0 27.0 41.0 48 35.58619097294464 39.0 35.0 41.0 27.0 41.0 49 35.5336258210813 39.0 35.0 41.0 27.0 41.0 50 35.381948064093095 38.0 35.0 41.0 26.0 41.0 51 35.299986733660475 38.0 35.0 40.0 26.0 41.0 52 34.980550676329585 38.0 35.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 2.0 13 2.0 14 3.0 15 20.0 16 49.0 17 106.0 18 252.0 19 453.0 20 867.0 21 1479.0 22 2370.0 23 4372.0 24 8243.0 25 15636.0 26 22140.0 27 23917.0 28 21470.0 29 20249.0 30 21435.0 31 24965.0 32 30867.0 33 40893.0 34 75384.0 35 121416.0 36 120056.0 37 104916.0 38 174081.0 39 542161.0 40 1625.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.333059065658233 20.205650010765307 25.44795644001041 26.013334483566048 2 33.880853772316264 19.20248276282032 26.98155978805754 19.93510367680587 3 20.73064908647116 21.461312671674047 38.227501049345705 19.580537192509084 4 22.048728787449317 24.449501279875545 35.90226694919862 17.59950298347652 5 20.076973766719757 29.712685882802404 31.55677957070705 18.65356077977079 6 73.47442532464473 1.8232880078815108 21.08093844490953 3.621348222564231 7 74.57226929074379 1.5318635002403165 17.32214224560707 6.573724963408825 8 61.82868153608263 3.6994238928949685 25.342260685746513 9.129633885275885 9 35.51986289999282 16.573355245749877 29.367181105832767 18.53960074842453 10 27.64168704342588 20.23653230933624 40.59427401588046 11.527506631357422 11 24.185189400557185 16.768000719137095 40.493797805037005 18.553012075268715 12 20.60958467658042 18.88416310783214 42.33709406269687 18.169158152890578 13 15.148129917335481 21.853575858451784 41.98100521156912 21.01728901264362 14 14.149384782566147 22.771273082887074 41.78099520744423 21.29834692710255 15 15.160526332959023 18.82283347264198 45.497672591090094 20.5189676033089 16 16.41807382899181 24.1671384795615 38.02176404619006 21.39302364525663 17 17.16707830982485 21.657915473843925 40.08913820263572 21.085868013695503 18 19.119405030044998 27.513228280356177 38.145945683401344 15.221421006197483 19 18.397730658510646 23.300694271768577 35.97062846927465 22.330946600446126 20 15.93744087235969 29.12229752702382 34.964488981326355 19.975772619290126 21 15.552064583150587 23.854183355310994 37.151550168149036 23.442201893389374 22 14.326776765202464 25.849063853139448 33.02760341039168 26.79655597126641 23 13.701591453287623 23.50679374321731 41.92351774028567 20.868097063209394 24 18.10500126501434 21.862420084803084 38.29354277234599 21.739035877836585 25 14.370127973055558 24.935498767245335 38.66181055812143 22.032562701577678 26 15.52995401727234 21.537865975173823 38.98853947750921 23.943640530044636 27 20.106551179435577 21.442536814092186 40.92846978210581 17.522442224366426 28 15.348357402436221 22.10715867629479 37.61935174720591 24.925132174063076 29 16.74777498838289 21.269204476338434 39.176080572351935 22.80693996292674 30 19.323837147345536 20.848233800748282 36.25299126958869 23.57493778231749 31 18.52763929475269 20.210652073209896 38.90582421302696 22.355884419010447 32 15.381052042472584 21.54837755567332 37.81566457474133 25.254905827112772 33 13.180434541488484 20.932543925720097 41.21097756973709 24.67604396305433 34 17.3997829539861 19.80200531958467 40.13676653634724 22.661445190082 35 15.726629313100837 23.56254136669395 36.27502934180832 24.43579997839689 36 17.110968218055124 24.859815387648965 33.17483803104324 24.854378363252675 37 18.24317417833875 24.457185607688967 35.65549853526563 21.644141678706657 38 16.949524840314595 28.148780185453276 30.24565926095615 24.65603571327598 39 20.57544016337171 26.67875377601344 32.92161768149331 19.824188379121534 40 15.745405170682695 23.401967912856822 38.57982023022536 22.27280668623512 41 17.715347849946824 25.46231018441662 33.96864359290171 22.853698372734847 42 18.090937495242603 20.325989484069883 38.430193318839436 23.152879701848082 43 20.894194780311594 21.737513511005623 35.40720775450168 21.961083954181106 44 15.959623931896557 22.877403799102673 35.94032611997265 25.222646149028115 45 18.158284104097994 21.46479236728767 36.05747587229807 24.319447656316264 46 21.946005273188728 20.685340549835406 34.85270375973862 22.515950417237253 47 15.943602833342155 19.71740521997838 39.073864513701665 25.265127432977803 48 17.002227730129306 18.177277442655704 33.852073789845235 30.968421037369758 49 19.31542788294594 17.68171079234844 38.4077202846681 24.59514104003752 50 17.966538377055468 17.41123695204762 38.985204769212814 25.6370199016841 51 16.025665654896837 17.3024964641218 37.342353477629544 29.32948440335182 52 14.840321842846796 17.478946029196095 44.918738233373034 22.76199389458407 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 444.0 1 1801.5 2 3159.0 3 40888.0 4 78617.0 5 45189.5 6 11762.0 7 11304.0 8 10846.0 9 11147.5 10 11449.0 11 11526.5 12 11604.0 13 11310.0 14 10103.0 15 9190.0 16 8308.5 17 7427.0 18 6764.5 19 6102.0 20 5716.5 21 5331.0 22 5094.5 23 4858.0 24 4729.0 25 4600.0 26 4872.5 27 5145.0 28 5406.0 29 5667.0 30 7027.5 31 8388.0 32 9541.0 33 10694.0 34 13035.0 35 15376.0 36 17756.5 37 20137.0 38 23469.0 39 32736.5 40 38672.0 41 53364.0 42 68056.0 43 97067.5 44 126079.0 45 163811.0 46 201543.0 47 208968.0 48 216393.0 49 189788.5 50 163184.0 51 134259.5 52 105335.0 53 85369.5 54 65404.0 55 53420.0 56 41436.0 57 35605.5 58 29775.0 59 24840.0 60 19905.0 61 16334.5 62 12764.0 63 10379.5 64 6602.5 65 5210.0 66 4111.0 67 3012.0 68 2472.5 69 1933.0 70 1634.5 71 1336.0 72 1321.0 73 1306.0 74 985.5 75 665.0 76 511.0 77 357.0 78 294.0 79 231.0 80 155.0 81 79.0 82 67.0 83 55.0 84 49.0 85 43.0 86 25.0 87 7.0 88 8.5 89 18.0 90 26.0 91 14.0 92 2.0 93 2.5 94 3.0 95 2.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1379431.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.24345234851976 #Duplication Level Percentage of deduplicated Percentage of total 1 72.32930635819064 24.044758493199975 2 12.560089871955713 8.350814983029707 3 5.080499876431189 5.0668006664640215 4 2.542138211900495 3.380378020426613 5 1.4490378923194787 2.4085511062261045 6 0.9811696532429607 1.957047996803761 7 0.6772658208654609 1.5760257830255449 8 0.4784810503212723 1.272508959681992 9 0.3843231992100637 1.1498606963433375 >10 2.994534225946979 20.903576283011418 >50 0.3408422994560308 7.642676712853295 >100 0.16613521689595456 10.416131994335812 >500 0.010711349188187934 2.3558109414351884 >1k 0.0045905782235091145 2.835504569185626 >5k 6.557968890727307E-4 1.8352768624204356 >10k+ 2.185989630242436E-4 4.804275931557213 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 66111 4.7926282648425325 No Hit CCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGCT 9271 0.6720887090401767 No Hit CTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGCTT 9171 0.6648393431784555 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGCT 6813 0.4938992961590685 No Hit CGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 4280 0.31027285888166933 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCG 3200 0.23197970757507985 No Hit TCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGCT 2933 0.21262390072428416 No Hit ACCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 2705 0.19609534655955968 No Hit GCCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 2507 0.18174160215335164 No Hit CGTTCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCT 2149 0.15578887236838956 No Hit AGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 1885 0.1366505464934455 No Hit ACTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGCT 1842 0.13353331917290537 No Hit TCCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 1698 0.12309423233202675 No Hit CGTCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTG 1499 0.10866799426720147 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCT 1474 0.10685565280177116 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTT 1467 0.10634819719145068 No Hit TGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGCTTG 1461 0.1059132352397474 Illumina Single End Adapter 1 (95% over 22bp) TGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 1415 0.10257852694335563 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTC 1414 0.10250603328473841 No Hit GGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 1389 0.1006936918193081 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6792655812432807 0.0 2 0.0 0.0 0.0 2.2228005605209686 0.0 3 0.0 0.0 0.0 3.7379180256207087 0.0 4 0.0 0.0 0.0 4.679683144716916 0.0 5 0.0 0.0 0.0 9.548792219400609 0.0 6 0.0 0.0 0.0 10.712967883134423 0.0 7 0.0 0.0 0.0 14.383394312582507 0.0 8 0.0 0.0 0.0 19.116867751993393 0.0 9 0.0 0.0 0.0 22.847898880045467 0.0 10 0.0 0.0 0.0 25.239537171485924 0.0 11 0.0 0.0 0.0 27.34642037187797 0.0 12 0.0 0.0 0.0 28.770413308095875 0.0 13 0.0 0.0 0.0 29.43264287956411 0.0 14 0.0 0.0 0.0 29.907258862531002 0.0 15 0.0 0.0 0.0 31.3885217890565 0.0 16 0.0 0.0 0.0 33.04043478796692 0.0 17 0.0 0.0 0.0 34.826461055319186 0.0 18 0.0 0.0 0.0 35.90770397359491 0.0 19 0.0 0.0 0.0 37.024323797275834 0.0 20 0.0 0.0 0.0 38.30195203674558 0.0 21 7.249365861721246E-5 0.0 0.0 39.634240494812715 0.0 22 2.1748097585163738E-4 0.0 0.0 40.83495296248961 0.0 23 2.899746344688498E-4 0.0 0.0 41.83674283092086 0.0 24 7.97430244789337E-4 0.0 0.0 42.686441003573215 0.0 25 7.97430244789337E-4 0.0 0.0 43.50366201716505 0.0 26 7.97430244789337E-4 0.0 0.0 44.33153959857361 0.0 27 7.97430244789337E-4 0.0 0.0 45.11650093408079 0.0 28 8.699239034065495E-4 0.0 0.0 45.931184669621025 0.0 29 8.699239034065495E-4 0.0 0.0 46.82626387256775 0.0 30 8.699239034065495E-4 0.0 0.0 47.65979595934846 0.0 31 8.699239034065495E-4 0.0 0.0 48.378208116245034 0.0 32 9.424175620237619E-4 0.0 0.0 49.112278903402924 0.0 33 9.424175620237619E-4 0.0 0.0 49.8323584144477 0.0 34 9.424175620237619E-4 0.0 0.0 50.60042872749706 0.0 35 9.424175620237619E-4 0.0 0.0 51.250769338952075 0.0 36 9.424175620237619E-4 0.0 0.0 51.86152841280209 0.0 37 9.424175620237619E-4 0.0 0.0 52.51128907498816 0.0 38 9.424175620237619E-4 0.0 0.0 53.14365125910611 0.0 39 9.424175620237619E-4 0.0 0.0 53.79580421202655 0.0 40 9.424175620237619E-4 0.0 0.0 54.41692987905883 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTACTA 20 6.311895E-4 46.000004 7 TCGCACT 20 6.311895E-4 46.000004 9 GATCGCG 20 6.311895E-4 46.000004 8 ACCGCAG 20 6.311895E-4 46.000004 31 CCTACGG 20 6.311895E-4 46.000004 1 TAGCCGT 20 6.311895E-4 46.000004 21 CTCGCGG 35 1.01976184E-7 46.000004 1 TCATCGA 35 1.01976184E-7 46.000004 15 ATAACGG 70 0.0 46.000004 1 CGTCAAC 20 6.311895E-4 46.000004 23 CCCATCG 20 6.311895E-4 46.000004 13 CCCGCAC 70 0.0 46.000004 32 CTGTCGG 50 1.6370905E-11 46.0 1 CAACGGC 50 1.6370905E-11 46.0 2 CGCGGAC 30 1.8616756E-6 46.0 3 GGTCCGC 25 3.417515E-5 46.0 29 CACGAAA 25 3.417515E-5 46.0 34 CGGCTGG 25 3.417515E-5 46.0 5 CGCACTT 65 0.0 46.0 34 TTACCGG 65 0.0 46.0 1 >>END_MODULE