##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043285_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1363233 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.19108618996166 33.0 31.0 34.0 31.0 34.0 2 32.495171405034945 34.0 31.0 34.0 31.0 34.0 3 32.56899957674147 34.0 31.0 34.0 31.0 34.0 4 36.13889261776967 37.0 35.0 37.0 35.0 37.0 5 36.0982700682862 37.0 35.0 37.0 35.0 37.0 6 36.329066271136334 37.0 37.0 37.0 35.0 37.0 7 36.273301775998675 37.0 37.0 37.0 35.0 37.0 8 36.160922600905344 37.0 37.0 37.0 35.0 37.0 9 37.69478071613583 39.0 38.0 39.0 35.0 39.0 10 37.50676370070267 39.0 37.0 39.0 35.0 39.0 11 37.21800968726549 39.0 37.0 39.0 34.0 39.0 12 37.255401681150616 39.0 37.0 39.0 34.0 39.0 13 37.248088918035286 39.0 37.0 39.0 34.0 39.0 14 38.638840168921966 40.0 38.0 41.0 34.0 41.0 15 38.765947567290404 40.0 38.0 41.0 35.0 41.0 16 38.82489567080609 40.0 38.0 41.0 35.0 41.0 17 38.76784746261277 40.0 38.0 41.0 35.0 41.0 18 38.541876553751266 40.0 38.0 41.0 35.0 41.0 19 38.29266970503208 40.0 37.0 41.0 35.0 41.0 20 38.02406851946806 40.0 35.0 41.0 34.0 41.0 21 37.95804092183801 40.0 35.0 41.0 34.0 41.0 22 37.929251272526415 40.0 35.0 41.0 34.0 41.0 23 37.88593806047829 40.0 35.0 41.0 34.0 41.0 24 37.81011169770685 40.0 35.0 41.0 34.0 41.0 25 37.80932826596774 40.0 35.0 41.0 34.0 41.0 26 37.80270210594961 40.0 35.0 41.0 34.0 41.0 27 37.81656914115195 40.0 35.0 41.0 34.0 41.0 28 37.7463074910892 40.0 35.0 41.0 34.0 41.0 29 37.75675544826159 40.0 35.0 41.0 34.0 41.0 30 37.636550024830676 40.0 35.0 41.0 34.0 41.0 31 37.47273796922463 40.0 35.0 41.0 33.0 41.0 32 37.211287432155764 40.0 35.0 41.0 33.0 41.0 33 36.89757656981602 40.0 35.0 41.0 32.0 41.0 34 36.60411756464229 40.0 35.0 41.0 31.0 41.0 35 36.36714780231993 40.0 35.0 41.0 30.0 41.0 36 36.27836107253859 40.0 35.0 41.0 30.0 41.0 37 36.174004003717634 39.0 35.0 41.0 30.0 41.0 38 36.078722419425 39.0 35.0 41.0 30.0 41.0 39 36.017698368510736 39.0 35.0 41.0 29.0 41.0 40 35.9743763538588 39.0 35.0 41.0 29.0 41.0 41 35.960761659965684 39.0 35.0 41.0 29.0 41.0 42 35.90144384708997 39.0 35.0 41.0 29.0 41.0 43 35.787761153082414 39.0 35.0 41.0 28.0 41.0 44 35.7064206925742 39.0 35.0 41.0 28.0 41.0 45 35.64493303785927 39.0 35.0 41.0 27.0 41.0 46 35.55816650565237 39.0 35.0 41.0 27.0 41.0 47 35.41496427976729 38.0 35.0 40.0 26.0 41.0 48 35.40649544135155 38.0 35.0 40.0 26.0 41.0 49 35.343115226817424 38.0 35.0 40.0 26.0 41.0 50 35.22269120539189 38.0 35.0 40.0 26.0 41.0 51 34.81633367150003 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 9.0 15 14.0 16 41.0 17 73.0 18 198.0 19 376.0 20 713.0 21 1234.0 22 2035.0 23 3595.0 24 6431.0 25 13174.0 26 20588.0 27 23885.0 28 22769.0 29 20859.0 30 21947.0 31 25145.0 32 30370.0 33 41243.0 34 75229.0 35 119850.0 36 115796.0 37 106262.0 38 188310.0 39 522922.0 40 164.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.76705596182017 20.303939238560098 25.54955755912599 25.379447240493736 2 33.678101982566446 19.295380907005626 26.90141743927854 20.125099671149393 3 20.845005952760825 21.59667496312076 37.8338112413652 19.72450784275322 4 22.222760159121734 24.570341240272207 35.48153543818262 17.725363162423445 5 20.139183837245724 30.019446418917383 31.10429398349365 18.737075760343245 6 73.92932829530974 1.7859749580592605 20.620979685791056 3.66371706083993 7 74.9853473324076 1.4990100738465104 16.922272274805554 6.593370318940342 8 62.08087685670755 3.643544427108205 24.967485382176047 9.3080933340082 9 35.69206437931007 16.60273775649504 29.058128727811024 18.647069136383877 10 27.93366944608882 20.194566886218276 40.23809576205975 11.633667905633153 11 24.30105491871162 16.74651361872842 40.310863953557465 18.641567509002495 12 20.900682421860388 18.680078900672154 42.11026288242729 18.308975795040173 13 15.281320214519456 21.785564169881454 41.767328108987975 21.16578750661112 14 14.255009965281062 22.67440708961711 41.493640485522285 21.57694245957954 15 15.175248838606459 18.821213981762472 45.329448450851764 20.674088728779306 16 16.47260593016748 24.070646763979454 37.92748561691215 21.529261688940924 17 17.300710883612705 21.65242478725207 39.87960972188907 21.167254607246157 18 19.190849986759417 27.550756180344816 38.05006187496928 15.208331957926488 19 18.476592042592866 23.300859060776844 35.708055776231944 22.514493120398345 20 15.976652560494061 29.133611055483545 34.71820297777416 20.171533406248233 21 15.653743710722964 23.84603365675567 36.86347088135337 23.636751751167996 22 14.46238464004319 25.86036282865805 32.620982619992326 27.05626991130643 23 13.77182037113245 23.412285354007714 41.69257933163296 21.123314943226873 24 18.23562076328845 21.76766554213403 38.03861849001601 21.95809520456151 25 14.295355232744514 24.824589780323684 38.62993340096667 22.25012158596513 26 15.610024111798937 21.306335747447427 38.84420344871346 24.239436692040172 27 20.204323105441258 21.319759718257995 40.75216782457584 17.72374935172491 28 15.444975290357554 22.094462208587967 37.35252887804212 25.108033623012354 29 16.898505244517995 21.194836099184805 38.91616473486191 22.99049392143529 30 19.467471811495173 20.797178472058704 35.97074014493487 23.76460957151125 31 18.55332140580517 20.160823571612482 38.58907464828096 22.696780374301383 32 15.448863107040395 21.361938861515238 37.61220569044323 25.576992341001137 33 13.262589740711968 20.75580623415073 41.09833021941224 24.883273805725068 34 17.519602298359853 19.60075790418806 40.06930583399903 22.810333963453054 35 15.678244291328042 23.443974727724463 36.28939440286437 24.588386578083128 36 17.188771105159574 24.61692168543455 33.00616989172064 25.18813731768524 37 18.475931847307102 24.198798004449717 35.45798847299031 21.867281675252872 38 17.16273006888771 27.981570281822698 30.002281341487482 24.853418307802112 39 20.789549548756522 26.590905589873486 32.625530631960935 19.99401422940906 40 15.762749287906031 23.312742575920627 38.52158801906938 22.40292011710397 41 17.912785268549104 25.271762053882206 33.85518102921511 22.960271648353583 42 18.244716787225663 20.095464238321696 38.42387911677608 23.23593985767657 43 20.994650217534346 21.524640321940563 35.293819911929944 22.18688954859514 44 16.121308683108463 22.499455338889245 36.02766364957421 25.351572328428084 45 18.243763171812887 21.198577205804142 36.0273702294472 24.530289392935764 46 22.175739583768877 20.535887848959057 34.6731629882786 22.61520957899347 47 16.168035838334312 19.537599221849824 38.85821425977804 25.436150680037823 48 17.194639507699712 17.911831653136332 33.67582797658214 31.21770086258182 49 19.520727564546927 17.412430596970584 38.25450234846134 24.81233949002115 50 18.080254806038294 17.080865853452785 38.99678191475705 25.84209742575187 51 16.21769719483023 17.172046157920178 37.04869233652648 29.56156431072311 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 423.0 1 1756.5 2 3090.0 3 38777.0 4 74464.0 5 43228.5 6 11993.0 7 11375.0 8 10757.0 9 10925.5 10 11094.0 11 11039.0 12 10984.0 13 10559.0 14 10134.0 15 9232.0 16 8330.0 17 7597.0 18 6864.0 19 6178.5 20 5493.0 21 5088.0 22 4683.0 23 4588.5 24 4494.0 25 4338.0 26 4524.5 27 4867.0 28 5607.5 29 6348.0 30 7585.0 31 8822.0 32 9869.0 33 10916.0 34 13800.5 35 16685.0 36 19619.5 37 22554.0 38 27256.0 39 31958.0 40 40220.5 41 48483.0 42 63870.0 43 79257.0 44 113654.0 45 148051.0 46 185760.0 47 223469.0 48 219829.5 49 216190.0 50 176704.0 51 137218.0 52 110887.5 53 84557.0 54 68843.5 55 53130.0 56 44337.5 57 35545.0 58 30445.0 59 25345.0 60 20705.0 61 16065.0 62 12882.0 63 9699.0 64 8044.5 65 6390.0 66 5091.5 67 3793.0 68 3046.0 69 2299.0 70 1920.0 71 1541.0 72 1405.0 73 1269.0 74 1008.5 75 621.5 76 495.0 77 361.0 78 227.0 79 166.0 80 105.0 81 95.5 82 86.0 83 60.5 84 35.0 85 38.5 86 42.0 87 31.5 88 21.0 89 26.0 90 31.0 91 17.5 92 4.0 93 3.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1363233.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.41496891070268 #Duplication Level Percentage of deduplicated Percentage of total 1 71.46104847147782 23.16407664529171 2 12.711257387938483 8.240700260919315 3 5.2834284879711975 5.137865105385217 4 2.6596896516997828 3.448550294878644 5 1.539603031544056 2.4953092201162086 6 1.020487943529774 1.9847450977958723 7 0.693153436714543 1.572798297101404 8 0.5241973804332698 1.359347343185298 9 0.3861274154853544 1.1264677351674968 >10 3.1824611551868083 21.484384280489444 >50 0.3467911994460753 7.569892776875616 >100 0.17417694864039737 10.563754154750292 >500 0.012098791771650462 2.6145957252981433 >1k 0.004565581800622816 2.7880437464703527 >5k 6.848372700934224E-4 1.83681750407754 >10k+ 2.282790900311408E-4 4.61265181219746 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 62336 4.572659259275561 No Hit CTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGCT 8902 0.6530064926538603 No Hit CCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 8887 0.6519061671775844 No Hit GCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 7034 0.5159792933416371 No Hit CGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTG 4066 0.29826155910251584 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCC 3051 0.22380620187451447 No Hit TCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 2948 0.21625063360408678 No Hit ACCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTG 2611 0.19152998790375528 No Hit GCCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTG 2587 0.18976946714171386 No Hit CGTTCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTC 2144 0.15727318807569945 No Hit AGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTG 2013 0.14766367891622342 No Hit ACTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 1800 0.13203905715310588 No Hit TGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGCTT 1779 0.13049860148631964 Illumina Single End Adapter 1 (95% over 21bp) TCCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTG 1720 0.12617065461296784 No Hit GGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTG 1481 0.10863880202430547 No Hit TGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTG 1459 0.10702499132576748 No Hit CGTCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCT 1435 0.10526447056372608 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTC 1398 0.10255033438891223 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCT 1370 0.10049639349986393 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTT 1366 0.10020297337285702 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6671640137819433 0.0 2 0.0 0.0 0.0 2.219283130616703 0.0 3 0.0 0.0 0.0 3.7447743709255863 0.0 4 0.0 0.0 0.0 4.708806198206763 0.0 5 0.0 0.0 0.0 9.605181212602687 0.0 6 0.0 0.0 0.0 10.793386016917138 0.0 7 0.0 0.0 0.0 14.525763387476681 0.0 8 0.0 0.0 0.0 19.386267791346015 0.0 9 0.0 0.0 0.0 23.21730767961163 0.0 10 0.0 0.0 0.0 25.709104753185994 0.0 11 0.0 0.0 0.0 27.854519366828708 0.0 12 0.0 0.0 0.0 29.30306117883003 0.0 13 0.0 0.0 0.0 29.981228447374733 0.0 14 0.0 0.0 0.0 30.45979667452299 0.0 15 0.0 0.0 0.0 31.982280358530055 0.0 16 0.0 0.0 0.0 33.685070710582856 0.0 17 0.0 0.0 0.0 35.5277491081862 0.0 18 0.0 0.0 0.0 36.64509295182848 0.0 19 0.0 0.0 0.0 37.81151131171267 0.0 20 0.0 0.0 0.0 39.15104754653093 0.0 21 0.0 0.0 0.0 40.47063121271272 0.0 22 2.93420127006902E-4 0.0 0.0 41.72118779401614 0.0 23 4.4013019051035294E-4 0.0 0.0 42.745590812428986 0.0 24 0.001173680508027608 0.0 0.0 43.63392024694238 0.0 25 0.001173680508027608 0.0 0.0 44.46561959694344 0.0 26 0.001173680508027608 0.0 0.0 45.30370083470691 0.0 27 0.001173680508027608 0.0 0.0 46.097769053419334 0.0 28 0.001173680508027608 0.0 0.0 46.917364823181366 0.0 29 0.001173680508027608 0.0 0.0 47.80642780801227 0.0 30 0.001173680508027608 0.0 0.0 48.64854357252209 0.0 31 0.001173680508027608 0.0 0.0 49.36786301387951 0.0 32 0.001173680508027608 0.0 0.0 50.111389615715 0.0 33 0.001173680508027608 0.0 0.0 50.83239622280271 0.0 34 0.001173680508027608 0.0 0.0 51.6014503756878 0.0 35 0.001173680508027608 0.0 0.0 52.26105882119931 0.0 36 0.001173680508027608 0.0 0.0 52.88164238981891 0.0 37 0.001173680508027608 0.0 0.0 53.537069598520574 0.0 38 0.001173680508027608 0.0 0.0 54.17540508482409 0.0 39 0.001173680508027608 0.0 0.0 54.82980532308123 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAA 20 7.0337486E-4 45.000004 12 CTTCGAC 25 3.891188E-5 45.000004 21 GTATTCG 20 7.0337486E-4 45.000004 8 CTATCGG 50 2.1827873E-11 45.000004 1 CGCATGA 20 7.0337486E-4 45.000004 25 CGACATC 20 7.0337486E-4 45.000004 10 CCGTACT 20 7.0337486E-4 45.000004 24 TCGTGGA 20 7.0337486E-4 45.000004 20 TGATTCG 20 7.0337486E-4 45.000004 45 GATATCG 25 3.891188E-5 45.000004 8 TACTCCG 20 7.0337486E-4 45.000004 21 TTACGAG 20 7.0337486E-4 45.000004 20 CGACTCT 20 7.0337486E-4 45.000004 21 CGATCCG 25 3.891188E-5 45.000004 9 TCGACAT 20 7.0337486E-4 45.000004 18 TACCGGC 20 7.0337486E-4 45.000004 2 GCGATCC 45 3.8562575E-10 45.0 8 ACGTAGG 140 0.0 45.0 1 TTACCGG 70 0.0 45.0 1 CGACGGT 110 0.0 44.999996 27 >>END_MODULE