##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043269_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 997340 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.06676760182084 33.0 31.0 34.0 30.0 34.0 2 32.36276194677843 34.0 31.0 34.0 30.0 34.0 3 32.41909880281549 34.0 31.0 34.0 30.0 34.0 4 36.025047626686984 37.0 35.0 37.0 35.0 37.0 5 35.96670844446227 37.0 35.0 37.0 35.0 37.0 6 36.23864579782221 37.0 36.0 37.0 35.0 37.0 7 36.17017767260914 37.0 37.0 37.0 35.0 37.0 8 36.063036677562316 37.0 36.0 37.0 35.0 37.0 9 37.61443439549201 39.0 37.0 39.0 35.0 39.0 10 37.4671566366535 39.0 37.0 39.0 35.0 39.0 11 37.21347584574969 39.0 37.0 39.0 34.0 39.0 12 37.208107566125896 39.0 37.0 39.0 34.0 39.0 13 37.20936290532817 39.0 37.0 39.0 34.0 39.0 14 38.606065133254454 40.0 38.0 41.0 34.0 41.0 15 38.72310846852628 40.0 38.0 41.0 35.0 41.0 16 38.77735476367137 40.0 38.0 41.0 35.0 41.0 17 38.72248180159224 40.0 38.0 41.0 35.0 41.0 18 38.4858724206389 40.0 38.0 41.0 35.0 41.0 19 38.23341588625745 40.0 37.0 41.0 34.0 41.0 20 37.94984959993583 40.0 35.0 41.0 34.0 41.0 21 37.89399201876993 40.0 35.0 41.0 34.0 41.0 22 37.859999598933165 40.0 35.0 41.0 34.0 41.0 23 37.83214751238294 40.0 35.0 41.0 34.0 41.0 24 37.74549702207873 40.0 35.0 41.0 34.0 41.0 25 37.71773517556701 39.0 35.0 41.0 34.0 41.0 26 37.73444462269637 40.0 35.0 41.0 34.0 41.0 27 37.73754286401829 40.0 35.0 41.0 34.0 41.0 28 37.659701806806105 40.0 35.0 41.0 34.0 41.0 29 37.671823049311165 40.0 35.0 41.0 34.0 41.0 30 37.53516052700183 40.0 35.0 41.0 33.0 41.0 31 37.387164858523676 40.0 35.0 41.0 33.0 41.0 32 37.200247658772334 40.0 35.0 41.0 33.0 41.0 33 36.85463532997774 39.0 35.0 41.0 32.0 41.0 34 36.65605310124932 39.0 35.0 41.0 31.0 41.0 35 36.463022640222995 39.0 35.0 41.0 31.0 41.0 36 36.1793260071791 39.0 35.0 41.0 30.0 41.0 37 36.16745242344637 39.0 35.0 41.0 30.0 41.0 38 36.003436140132756 38.0 35.0 41.0 30.0 41.0 39 35.82294503378988 38.0 35.0 40.0 30.0 41.0 40 35.7710560089839 38.0 35.0 40.0 30.0 41.0 41 35.821042974311666 38.0 35.0 40.0 29.0 41.0 42 35.78307096877695 38.0 35.0 40.0 28.0 41.0 43 35.672751519040645 38.0 35.0 40.0 28.0 41.0 44 35.604015681713356 38.0 35.0 40.0 28.0 41.0 45 35.583127118134236 38.0 35.0 40.0 28.0 41.0 46 35.48918222471775 38.0 35.0 40.0 28.0 41.0 47 35.29061303066156 38.0 35.0 40.0 26.0 41.0 48 35.243281127799946 38.0 35.0 40.0 26.0 41.0 49 35.18478954017687 38.0 35.0 40.0 27.0 41.0 50 35.03419495858985 37.0 35.0 40.0 26.0 41.0 51 34.60608217859506 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 0.0 13 2.0 14 1.0 15 16.0 16 30.0 17 62.0 18 141.0 19 304.0 20 595.0 21 1016.0 22 1568.0 23 2498.0 24 4569.0 25 8539.0 26 12876.0 27 15424.0 28 15015.0 29 15224.0 30 16547.0 31 19664.0 32 23961.0 33 31761.0 34 54979.0 35 95994.0 36 103646.0 37 82594.0 38 148222.0 39 342065.0 40 24.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.999618986504103 19.1739025808651 26.199189844987668 27.62728858764313 2 33.424208394328915 19.775202037419536 27.200954539073933 19.599635029177612 3 20.642108007299417 22.03391020113502 38.09312771973449 19.23085407183107 4 22.708003288748067 24.045861992901116 36.01259349870656 17.233541219644255 5 19.74371829065314 28.861672047646742 31.99741311889626 19.397196542803858 6 71.06302765355846 1.5229510497924479 22.74851103936471 4.665510257284376 7 71.79046263059739 1.3329456353901377 18.49038442256402 8.386207311448453 8 57.96659113241221 2.9735095353640686 28.082900515370884 10.976998816852829 9 32.765556379970725 17.25890869713438 30.653438145466943 19.32209677742796 10 25.61162692762749 18.69192050855275 43.154892012753926 12.541560551065837 11 22.015561393306193 15.398159103214551 41.38237712314757 21.203902380331684 12 17.367998877012855 19.237571941364028 44.7274750837227 18.666954097900415 13 12.304830850061164 22.613652315158323 43.59716846812521 21.484348366655304 14 11.046283113080795 22.33601379669922 44.69318386909178 21.9245192211282 15 11.05420418312712 18.269396594942545 49.36049892714621 21.315900294784125 16 12.006537389455954 25.40136763791686 39.40672188020133 23.185373092425856 17 13.85365071089097 22.24547295806846 41.54410732548579 22.356769005554774 18 15.576032245773758 29.09579481420579 39.59772996169812 15.730442978322337 19 14.812200453205527 23.57521005875629 36.703431126797284 24.9091583612409 20 12.714520624862132 30.69544989672529 35.14047365993543 21.449555818477148 21 13.232197645737662 24.64826438325947 36.23217759239577 25.887360378607095 22 11.65630577335713 27.260312431066637 32.09868249543786 28.984699300138367 23 11.326428299276074 23.702849579882486 42.39507088856358 22.57565123227786 24 16.94647763049712 21.554835863396633 38.50923456394008 22.989451942166163 25 12.742795836926224 25.05274028916919 38.380492109009964 23.82397176489462 26 16.57308440451601 20.748390719313374 36.776926624822025 25.901598251348588 27 22.178093729319993 21.126697014057395 37.5672288286843 19.127980427938315 28 16.36011791365031 21.53728918924339 34.29933623438346 27.80325666272284 29 24.182926584715343 21.143140754406723 31.697615657649347 22.976317003228587 30 23.185072292297512 20.977600417109514 28.49670122525919 27.34062606533379 31 25.58154691479335 19.103314817414322 32.64834459662703 22.6667936711653 32 28.421400926464397 18.631359416046685 28.219263240218982 24.727976417269936 33 19.966711452463553 21.29694988669862 34.048869994184535 24.6874686666533 34 26.16068742855997 15.773156596546814 36.050293781458684 22.015862193434536 35 29.01878998135039 19.959793049511703 32.79884492750717 18.222572041630738 36 25.70768243527784 22.078428620129547 34.678143862674716 17.535745081917902 37 27.385244751037764 21.340365371889224 35.47696873683999 15.79742114023302 38 25.917741191569576 19.603244630717708 33.69492850983617 20.78408566787655 39 29.097900415104178 17.628190988028155 37.673912607536046 15.599995989331623 40 20.35835321956404 16.078167926684984 41.53097238654822 22.032506467202758 41 23.512142298514046 19.130186295546153 32.851986283514144 24.505685122425653 42 22.516493873704054 14.798062847173481 39.258126616800695 23.427316662321775 43 25.530711693103658 19.39659494254718 35.79872460745583 19.273968756893336 44 19.29061303066156 22.228327350753002 35.59458158702148 22.886478031563957 45 22.50817173681994 19.652976918603486 34.85290873724106 22.985942607335513 46 27.728658230894176 15.968776946678165 34.38135440271121 21.92121041971645 47 19.881083682595705 15.336194276776224 39.37433573304992 25.408386307578155 48 20.478472737481702 13.927146208915717 34.068622535945615 31.525758517656964 49 22.989853009003948 13.584133795897085 39.73559668718792 23.690416507911046 50 21.080072994164478 13.370164637936913 40.1433813945094 25.406380973389215 51 18.084404516012594 12.764754246295146 38.60208153688812 30.54875970080414 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 527.0 1 1740.0 2 2953.0 3 36839.5 4 70726.0 5 38815.0 6 6904.0 7 6371.0 8 5838.0 9 6066.5 10 6295.0 11 6452.0 12 6609.0 13 6404.5 14 6200.0 15 5792.5 16 5385.0 17 4813.5 18 4242.0 19 3866.0 20 3490.0 21 3282.0 22 3074.0 23 2877.0 24 2680.0 25 2575.5 26 2861.0 27 3251.0 28 3487.0 29 3723.0 30 4358.5 31 4994.0 32 5828.5 33 6663.0 34 7886.0 35 9109.0 36 11054.5 37 13000.0 38 14582.5 39 16165.0 40 19323.5 41 22482.0 42 28759.5 43 35037.0 44 41179.0 45 47321.0 46 56646.5 47 65972.0 48 90016.5 49 114061.0 50 144644.0 51 175227.0 52 169916.0 53 164605.0 54 127169.0 55 89733.0 56 67286.5 57 44840.0 58 33350.0 59 21860.0 60 16747.0 61 11634.0 62 9111.5 63 6589.0 64 5435.0 65 4281.0 66 3419.5 67 2558.0 68 2288.5 69 2019.0 70 1765.5 71 1512.0 72 1430.0 73 1348.0 74 1120.0 75 698.5 76 505.0 77 419.0 78 333.0 79 226.5 80 120.0 81 95.0 82 70.0 83 48.5 84 27.0 85 16.5 86 6.0 87 6.0 88 6.0 89 3.5 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 997340.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.798189366538345 #Duplication Level Percentage of deduplicated Percentage of total 1 72.86854385687585 21.71350668711091 2 11.979198364282464 7.139168426364306 3 4.779533895751584 4.272643683281833 4 2.483777547272336 2.9604829479190893 5 1.443883209327779 2.1512552647357146 6 0.9271768361880378 1.6576914564599434 7 0.699778989207034 1.4596502784581193 8 0.4866690078122899 1.1601484202892756 9 0.3878377803709297 1.0401177260691787 >10 3.3226187498992923 21.2272567372094 >50 0.36484379411487083 7.344865252701517 >100 0.23643504821308078 13.26395914624884 >500 0.011549987987419885 2.228391295669884 >1k 0.006794110580835226 3.454138102214202 >5k 0.001019116587125284 2.345307437511381 >10k+ 3.3970552904176134E-4 6.581417137756375 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 65017 6.51904064812401 No Hit CCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGC 8489 0.8511640964966812 No Hit CTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGCT 8383 0.8405358252952855 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGC 6297 0.6313794693885736 No Hit CGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG 3804 0.3814145627368801 No Hit TCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGC 3260 0.3268694727976417 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCC 3152 0.31604066817735177 No Hit ACCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG 2015 0.20203741953596566 No Hit GCCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG 1987 0.19922995167144605 No Hit CGTTCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTC 1872 0.18769928008502615 No Hit AGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG 1716 0.17205767341127398 No Hit ACTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGC 1666 0.16704433793891751 No Hit TCCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG 1609 0.16132913550043115 No Hit TGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG 1407 0.141075260192111 No Hit TGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGCTT 1332 0.13355525698357631 Illumina Single End Adapter 1 (95% over 22bp) GGCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG 1308 0.13114885595684522 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTC 1233 0.12362885274831051 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGC 1198 0.12011951791766097 No Hit CGTCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCT 1183 0.11861551727595403 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCT 1162 0.11650991637756432 No Hit GTAATGGGTTTACCTGGCTTCCTTCTTGGTACATAGGCTACTCTTCCACAC 1084 0.10868911304068823 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTT 1071 0.10738564581787556 No Hit ATCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTG 1035 0.10377604427777888 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCG 1029 0.10317444402109613 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.8714179718050014 0.0 2 0.0 0.0 0.0 2.9202679126476427 0.0 3 0.0 0.0 0.0 4.7823209737902825 0.0 4 0.0 0.0 0.0 5.938396133715684 0.0 5 0.0 0.0 0.0 11.811919706419074 0.0 6 0.0 0.0 0.0 13.358633966350492 0.0 7 0.0 0.0 0.0 18.47023081396515 0.0 8 0.0 0.0 0.0 24.78452684139812 0.0 9 0.0 0.0 0.0 29.569855816471815 0.0 10 0.0 0.0 0.0 32.44039144123368 0.0 11 0.0 0.0 0.0 34.93141757073816 0.0 12 0.0 0.0 0.0 36.66723484468687 0.0 13 0.0 0.0 0.0 37.376621814025306 0.0 14 0.0 0.0 0.0 37.88577616459783 0.0 15 0.0 0.0 0.0 39.468987506768 0.0 16 0.0 0.0 0.0 41.221549321194374 0.0 17 0.0 0.0 0.0 43.284236067940725 0.0 18 0.0 0.0 0.0 44.284095694547496 0.0 19 0.0 0.0 0.0 45.448292457938116 0.0 20 0.0 0.0 0.0 46.64898630356749 0.0 21 0.0 0.0 0.0 47.77748811839493 0.0 22 0.0 0.0 0.0 48.85996751358614 0.0 23 0.0 0.0 0.0 49.65307718531293 0.0 24 7.018669661299056E-4 0.0 0.0 50.352537750416104 0.0 25 7.018669661299056E-4 0.0 0.0 50.99243989010769 0.0 26 7.018669661299056E-4 0.0 0.0 51.653999639039846 0.0 27 7.018669661299056E-4 0.0 0.0 52.29380151202198 0.0 28 7.018669661299056E-4 0.0 0.0 52.91304870956745 0.0 29 7.018669661299056E-4 0.0 0.0 53.66174022900916 0.0 30 7.018669661299056E-4 0.0 0.0 54.30946317203762 0.0 31 7.018669661299056E-4 0.0 0.0 54.87015461126597 0.0 32 8.021336755770349E-4 0.0 0.0 55.44157458840516 0.0 33 8.021336755770349E-4 0.0 0.0 55.9850201536086 0.0 34 8.021336755770349E-4 0.0 0.0 56.618404957186115 0.0 35 8.021336755770349E-4 0.0 0.0 57.14741211622917 0.0 36 8.021336755770349E-4 0.0 0.0 57.625082720035294 0.0 37 8.021336755770349E-4 0.0 0.0 58.133134136803896 0.0 38 8.021336755770349E-4 0.0 0.0 58.61461487556901 0.0 39 8.021336755770349E-4 0.0 0.0 59.08586840997052 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCATAA 20 7.032836E-4 45.000004 44 CGGGTCC 40 6.8139343E-9 45.000004 5 AGTCCAC 20 7.032836E-4 45.000004 33 CAACCGG 35 1.2117198E-7 45.000004 1 ATTAACG 20 7.032836E-4 45.000004 9 TGCGGAT 20 7.032836E-4 45.000004 16 TGTGCGT 40 6.8139343E-9 45.000004 19 TAGCATA 20 7.032836E-4 45.000004 29 CACTCGC 35 1.2117198E-7 45.000004 21 TGTTCGG 20 7.032836E-4 45.000004 1 GGACGTA 20 7.032836E-4 45.000004 19 CATACCG 40 6.8139343E-9 45.000004 13 TCATCGG 45 3.8380676E-10 45.000004 1 CCGACAT 20 7.032836E-4 45.000004 9 GAGCATT 20 7.032836E-4 45.000004 8 GTCCACC 20 7.032836E-4 45.000004 34 CGATCTT 20 7.032836E-4 45.000004 9 TCGACCC 20 7.032836E-4 45.000004 23 TAGCTAA 20 7.032836E-4 45.000004 38 TAGTCGG 35 1.2117198E-7 45.000004 1 >>END_MODULE