##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043267_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2695336 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.34094858674391 33.0 31.0 34.0 31.0 34.0 2 32.631470807350176 34.0 31.0 34.0 31.0 34.0 3 32.72703180605312 34.0 31.0 34.0 31.0 34.0 4 36.20507164969414 37.0 37.0 37.0 35.0 37.0 5 36.19183730711125 37.0 37.0 37.0 35.0 37.0 6 36.34724798689292 37.0 37.0 37.0 35.0 37.0 7 36.29912893976855 37.0 37.0 37.0 35.0 37.0 8 36.20158636993681 37.0 37.0 37.0 35.0 37.0 9 37.81348225230546 39.0 38.0 39.0 35.0 39.0 10 37.596136066152795 39.0 37.0 39.0 35.0 39.0 11 37.25416274631437 39.0 37.0 39.0 35.0 39.0 12 37.261278742242155 39.0 37.0 39.0 35.0 39.0 13 37.26725758866427 39.0 37.0 39.0 35.0 39.0 14 38.55586131005559 40.0 37.0 41.0 35.0 41.0 15 38.605750080880455 40.0 37.0 41.0 35.0 41.0 16 38.488786555739246 40.0 37.0 41.0 34.0 41.0 17 38.42726138781955 40.0 37.0 41.0 34.0 41.0 18 38.28421206113078 40.0 37.0 41.0 34.0 41.0 19 38.09885075552732 40.0 37.0 41.0 34.0 41.0 20 37.843869929389136 40.0 35.0 41.0 34.0 41.0 21 37.785550298738265 40.0 35.0 41.0 34.0 41.0 22 37.75248577542837 40.0 35.0 41.0 34.0 41.0 23 37.741785068726124 39.0 35.0 41.0 34.0 41.0 24 37.66045754592378 39.0 35.0 41.0 34.0 41.0 25 37.62685728235738 39.0 35.0 41.0 34.0 41.0 26 37.59872869282346 39.0 35.0 41.0 34.0 41.0 27 37.58014622295699 39.0 35.0 41.0 34.0 41.0 28 37.49522508510998 39.0 35.0 41.0 34.0 41.0 29 37.413405601379566 39.0 35.0 41.0 34.0 41.0 30 37.30766108566798 39.0 35.0 41.0 33.0 41.0 31 37.19665043616084 39.0 35.0 41.0 33.0 41.0 32 36.95769321524293 39.0 35.0 41.0 33.0 41.0 33 36.53856847532182 39.0 35.0 41.0 31.0 41.0 34 36.25508656434671 39.0 35.0 41.0 31.0 41.0 35 36.10778544864166 39.0 35.0 41.0 30.0 41.0 36 36.06021030402147 39.0 35.0 41.0 31.0 41.0 37 35.93786859968479 38.0 35.0 41.0 30.0 41.0 38 35.837920392856404 38.0 35.0 41.0 30.0 41.0 39 35.74522879522256 38.0 35.0 41.0 30.0 41.0 40 35.63599862874239 38.0 35.0 40.0 30.0 41.0 41 35.527704152654806 38.0 35.0 40.0 29.0 41.0 42 35.43409578620253 37.0 35.0 40.0 29.0 41.0 43 35.32470942398276 37.0 35.0 40.0 29.0 41.0 44 35.213975919885314 37.0 35.0 40.0 28.0 41.0 45 35.171358227694064 37.0 35.0 40.0 28.0 41.0 46 35.10385458436351 37.0 35.0 40.0 27.0 41.0 47 34.97187178147734 36.0 35.0 40.0 27.0 41.0 48 34.89974941899637 36.0 35.0 40.0 27.0 41.0 49 34.82835794869359 36.0 35.0 40.0 27.0 41.0 50 34.76278690300578 36.0 35.0 40.0 27.0 41.0 51 34.333015253014835 35.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 2.0 12 2.0 13 2.0 14 28.0 15 39.0 16 86.0 17 210.0 18 448.0 19 932.0 20 1694.0 21 2854.0 22 4348.0 23 6863.0 24 11205.0 25 19983.0 26 32183.0 27 42631.0 28 46319.0 29 46917.0 30 49825.0 31 55511.0 32 64051.0 33 83553.0 34 203609.0 35 274924.0 36 240767.0 37 250611.0 38 396454.0 39 859044.0 40 239.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.545741235972063 17.290571565103573 23.73373857656337 29.429948622360996 2 35.36802090722641 19.747371014226054 23.923325329383797 20.96128274916374 3 26.37589525016547 20.747209253317582 33.36270505792228 19.51419043859467 4 23.500075686296626 23.354676374299903 31.3578715232535 21.78737641614997 5 22.104442637207384 30.944973094263574 28.477562723163274 18.47302154536577 6 78.48502004944838 2.106787428357726 16.541425633019408 2.8667668891744853 7 78.0672613729791 1.9748929261509511 15.291971019568617 4.66587468130133 8 68.53913575153524 3.4646515313860684 20.75522309648964 7.240989620589048 9 42.73096192830875 14.48795252243134 25.147959289676685 17.63312625958322 10 30.500872618478738 15.141785662344137 34.409216513265875 19.94812520591125 11 26.909149731239445 12.640835873523745 38.756800636358506 21.6932137588783 12 21.71714398501708 13.552262129842068 41.23100051347958 23.49959337166127 13 17.290274756097197 16.314440945396047 43.73172769554519 22.66355660296156 14 18.4198556320993 16.505511743248338 43.36643001095225 21.70820261370011 15 22.63239165729245 13.980483323785977 41.832224257012854 21.55490076190872 16 21.25538337335308 17.730182804667024 39.0989101173286 21.915523704651292 17 21.620458451191244 19.478165245446206 38.536865162636495 20.364511140726055 18 21.937747279003432 25.61647230623566 34.176777960150424 18.269002454610483 19 22.92734560737511 21.759624774054142 32.84759302736282 22.465436591207926 20 22.241865207157847 25.914765357640015 33.30367716677995 18.539692268422193 21 19.27930321117664 20.400239524868145 35.46248037350445 24.857976890450765 22 21.786671494759837 21.018566887393632 33.360998406135636 23.833763211710895 23 23.029262399938265 19.074245288899046 35.27044494638145 22.626047364781236 24 24.063975697278558 17.939358951908034 33.111641739656946 24.885023611156456 25 18.296086276441972 18.467159567489915 37.16538494644082 26.0713692096273 26 18.041646755729158 17.964365110694917 36.92879106723615 27.06519706633978 27 22.181909787870605 20.773254243626766 34.83354208900115 22.21129387950148 28 24.81779637121309 21.54518026695002 31.077312809979908 22.559710551856984 29 23.5704565219327 18.665613489375723 35.74782513200581 22.01610485668577 30 28.013947055209442 18.093959343102306 31.244156572687043 22.64793702900121 31 29.73254540435775 16.942377499502843 31.16227438805403 22.162802708085376 32 28.62548491171416 18.59604887850717 30.562905700810582 22.215560508968085 33 25.976983945600846 18.45361765657417 34.140715665876165 21.42868273194882 34 25.498824636334767 21.989280742734856 32.52588916558084 19.986005455349538 35 27.148229385872487 24.71936708447481 28.280110531673973 19.85229299797873 36 27.1685979039348 22.942037653190546 28.141834635830186 21.747529807044465 37 25.95709774217389 23.641727784587896 29.784857991730902 20.616316481507315 38 26.63964715345322 20.125876699602575 29.004547113977626 24.229929032966577 39 27.913625611055544 17.499302498835025 32.549077369203694 22.037994520905745 40 23.329410507632446 18.16211411119059 34.29342389965481 24.215051481522153 41 23.629410210823437 21.210676516768228 30.389124027579495 24.770789244828844 42 22.690046806780305 17.002592626670666 32.07366354324655 28.233697023302472 43 24.37725760350472 18.276422679769794 33.06329897274403 24.283020743981456 44 23.58355321933889 19.64623334530463 33.34556433780427 23.424649097552216 45 24.13710201622358 20.531503307936376 32.72686596402081 22.60452871181923 46 24.44467034907707 18.9668746308438 32.283099398368144 24.305355621710987 47 22.57996776654191 19.338813416954324 34.13674584541593 23.944472971087833 48 24.00676576130026 17.935611738202585 31.04852233636177 27.00910016413538 49 22.725849393173984 16.46662976341354 34.799038042010345 26.008482801402128 50 21.97039626970441 16.46451499924314 36.81856362249456 24.746525108557893 51 20.55109270235696 15.467236737831572 35.800694236265905 28.180976323545558 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 669.0 1 4326.5 2 7984.0 3 84223.0 4 160462.0 5 91985.0 6 23508.0 7 20567.5 8 17627.0 9 16938.5 10 16250.0 11 15720.5 12 15191.0 13 14411.0 14 13631.0 15 12658.0 16 11685.0 17 10663.5 18 9642.0 19 9121.5 20 8601.0 21 8311.5 22 8022.0 23 8101.5 24 8181.0 25 8743.5 26 9965.0 27 10624.0 28 11014.5 29 11405.0 30 13731.0 31 16057.0 32 16999.5 33 17942.0 34 21827.0 35 25712.0 36 27787.5 37 29863.0 38 33260.0 39 36657.0 40 40278.0 41 43899.0 42 51838.0 43 59777.0 44 70306.0 45 80835.0 46 93782.5 47 106730.0 48 141515.5 49 176301.0 50 219812.5 51 263324.0 52 279155.5 53 294987.0 54 267570.0 55 240153.0 56 214441.0 57 188729.0 58 169421.5 59 150114.0 60 144707.0 61 139300.0 62 137767.0 63 136234.0 64 130144.0 65 124054.0 66 101449.5 67 78845.0 68 64134.5 69 49424.0 70 41664.0 71 33904.0 72 31316.5 73 28729.0 74 24340.5 75 15298.0 76 10644.0 77 8054.5 78 5465.0 79 4103.5 80 2742.0 81 2036.0 82 1330.0 83 905.0 84 480.0 85 305.5 86 131.0 87 135.0 88 139.0 89 90.0 90 41.0 91 38.5 92 36.0 93 25.5 94 15.0 95 9.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2695336.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.563268088114228 #Duplication Level Percentage of deduplicated Percentage of total 1 72.8343973325897 20.075540197144015 2 10.551761508216597 5.816820625056371 3 3.9572192313858308 3.2722168367438695 4 1.9649521896087276 2.166420159300497 5 1.2184177691506006 1.6791787807210037 6 0.9118636830110655 1.5080365892789527 7 0.7140450500718418 1.3776990599484789 8 0.5695862116092952 1.2559725959904293 9 0.523953785898128 1.2997690799843258 >10 6.201164631084601 36.20921909788407 >50 0.3685444732336169 6.766971171763098 >100 0.17121821955615868 8.415636914372827 >500 0.006912333092443383 1.3105233870899864 >1k 0.0051503658335852655 2.725462762404503 >5k 4.066078289672578E-4 0.7974093984445769 >10k+ 4.066078289672578E-4 5.323123343873007 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 115068 4.2691523431587015 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 16266 0.603486912206864 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 11155 0.4138630582606399 No Hit CCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC 8904 0.3303484240925807 No Hit CTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGCT 7233 0.26835244288652693 Illumina Single End Adapter 2 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTG 5208 0.19322266314849057 No Hit GCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC 4636 0.1720008191928576 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 4058 0.15055636848244522 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 3703 0.137385468824666 No Hit GGGCCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTC 3550 0.13170899657779217 No Hit CGTTCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTC 3512 0.13029915379752283 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTT 3007 0.11156308527025943 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCC 2829 0.10495908487847154 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 2757 0.10228780382111914 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2754758590394667 0.0 2 0.0 0.0 0.0 0.9070112223485309 0.0 3 0.0 0.0 0.0 1.5143195505124407 0.0 4 0.0 0.0 0.0 1.9285165189052496 0.0 5 0.0 0.0 0.0 4.1119548731586715 0.0 6 0.0 0.0 0.0 5.003865937308002 0.0 7 0.0 0.0 0.0 7.549485481587453 0.0 8 0.0 0.0 0.0 10.607768382123787 0.0 9 0.0 0.0 0.0 13.7040428354758 0.0 10 0.0 0.0 0.0 15.341204213500655 0.0 11 0.0 0.0 0.0 16.539607677855376 0.0 12 0.0 0.0 0.0 17.362473546897306 0.0 13 0.0 0.0 0.0 17.80746444970126 0.0 14 0.0 0.0 0.0 18.089210399000347 0.0 15 0.0 0.0 0.0 18.77513601272717 0.0 16 0.0 0.0 0.0 19.512780595814398 0.0 17 0.0 0.0 0.0 20.441570179005513 0.0 18 0.0 0.0 0.0 21.001945583036772 0.0 19 0.0 0.0 0.0 21.637562070183456 0.0 20 0.0 0.0 0.0 22.339663774757582 0.0 21 0.0 0.0 0.0 23.034679164304563 0.0 22 3.710112579656117E-5 0.0 0.0 23.68009034866154 0.0 23 3.710112579656117E-5 0.0 0.0 24.27508110306099 0.0 24 1.1130337738968351E-4 0.0 0.0 24.75338881683026 0.0 25 1.1130337738968351E-4 0.0 0.0 25.226057159478447 0.0 26 1.484045031862447E-4 0.0 0.0 25.68551750134306 0.0 27 1.484045031862447E-4 0.0 0.0 26.18482445231318 0.0 28 1.484045031862447E-4 0.0 0.0 26.66602605389458 0.0 29 1.484045031862447E-4 0.0 0.0 27.163737656455446 0.0 30 1.484045031862447E-4 0.0 0.0 27.63217647076283 0.0 31 1.484045031862447E-4 0.0 0.0 28.133264275771182 0.0 32 1.484045031862447E-4 0.0 0.0 28.67891053286121 0.0 33 1.484045031862447E-4 0.0 0.0 29.172318404829674 0.0 34 1.484045031862447E-4 0.0 0.0 29.70279030146891 0.0 35 1.484045031862447E-4 0.0 0.0 30.18440001543407 0.0 36 1.484045031862447E-4 0.0 0.0 30.713647574922014 0.0 37 1.484045031862447E-4 0.0 0.0 31.40187345844822 0.0 38 1.484045031862447E-4 0.0 0.0 32.097111454749985 0.0 39 1.484045031862447E-4 0.0 0.0 32.91411534591606 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 28195 0.0 44.24189 1 AATACGG 165 0.0 43.636364 1 ACTACGG 150 0.0 42.0 1 TAGTAGG 630 0.0 41.785713 1 AGACACG 445 0.0 40.95506 23 TGCAACG 105 0.0 40.714283 11 CACTTAC 4590 0.0 40.539215 36 ACCCGCA 4675 0.0 40.331554 31 CGCACTT 4630 0.0 40.23758 34 ACTTACT 4600 0.0 40.157608 37 GCACTTA 4635 0.0 40.14563 35 CCGCACT 4645 0.0 40.10764 33 CATGCGG 365 0.0 40.068493 1 CTTACTG 4635 0.0 39.757282 38 GCGATAT 85 0.0 39.705883 8 AGGGCGA 1095 0.0 39.65753 5 CCCGCAC 4765 0.0 39.616997 32 CGGGTAC 415 0.0 39.578312 5 TACGGGA 490 0.0 39.489796 3 GTTTTTT 32445 0.0 39.39667 2 >>END_MODULE