##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043265_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 906989 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.19159659047684 33.0 31.0 34.0 30.0 34.0 2 32.4812969065777 34.0 31.0 34.0 31.0 34.0 3 32.5379006801626 34.0 31.0 34.0 31.0 34.0 4 36.112735656110495 37.0 35.0 37.0 35.0 37.0 5 36.0655542680231 37.0 35.0 37.0 35.0 37.0 6 36.304066532229164 37.0 37.0 37.0 35.0 37.0 7 36.23875151738334 37.0 37.0 37.0 35.0 37.0 8 36.144912452080455 37.0 37.0 37.0 35.0 37.0 9 37.70748377323209 39.0 38.0 39.0 35.0 39.0 10 37.567473254912684 39.0 37.0 39.0 35.0 39.0 11 37.343270976825515 39.0 37.0 39.0 35.0 39.0 12 37.345516869554096 39.0 37.0 39.0 34.0 39.0 13 37.358405669749025 39.0 37.0 39.0 35.0 39.0 14 38.77059589476829 40.0 38.0 41.0 35.0 41.0 15 38.87943734709021 40.0 38.0 41.0 35.0 41.0 16 38.92174216004825 41.0 38.0 41.0 35.0 41.0 17 38.88873073433085 41.0 38.0 41.0 35.0 41.0 18 38.64103092760772 40.0 38.0 41.0 35.0 41.0 19 38.405885848670714 40.0 37.0 41.0 35.0 41.0 20 38.130534107910904 40.0 35.0 41.0 35.0 41.0 21 38.06979687736015 40.0 35.0 41.0 35.0 41.0 22 38.0366906324112 40.0 35.0 41.0 34.0 41.0 23 38.00966384377319 40.0 35.0 41.0 34.0 41.0 24 37.93561002393634 40.0 35.0 41.0 34.0 41.0 25 37.909310917772984 40.0 35.0 41.0 34.0 41.0 26 37.913335222367635 40.0 35.0 41.0 34.0 41.0 27 37.91540801487118 40.0 35.0 41.0 34.0 41.0 28 37.8683115230725 40.0 35.0 41.0 34.0 41.0 29 37.870982999793824 40.0 35.0 41.0 34.0 41.0 30 37.79850913296633 40.0 35.0 41.0 34.0 41.0 31 37.652766461335254 40.0 35.0 41.0 34.0 41.0 32 37.52325882673329 40.0 35.0 41.0 34.0 41.0 33 37.320975226821936 40.0 35.0 41.0 33.0 41.0 34 37.05205245047073 40.0 35.0 41.0 33.0 41.0 35 36.949241942294776 40.0 35.0 41.0 33.0 41.0 36 36.84479194345246 40.0 35.0 41.0 33.0 41.0 37 36.754049938863645 40.0 35.0 41.0 32.0 41.0 38 36.68501051280666 40.0 35.0 41.0 32.0 41.0 39 36.60402276102577 39.0 35.0 41.0 31.0 41.0 40 36.55908285547013 39.0 35.0 41.0 32.0 41.0 41 36.51887950129495 39.0 35.0 41.0 31.0 41.0 42 36.42133366556816 39.0 35.0 41.0 31.0 41.0 43 36.2950939868069 39.0 35.0 41.0 31.0 41.0 44 36.2106717942555 39.0 35.0 41.0 31.0 41.0 45 36.175773906850026 39.0 35.0 41.0 31.0 41.0 46 36.09174422181526 39.0 35.0 41.0 30.0 41.0 47 35.95766211056584 38.0 35.0 40.0 30.0 41.0 48 35.95904029707086 38.0 35.0 40.0 30.0 41.0 49 35.918833635248056 39.0 35.0 40.0 30.0 41.0 50 35.836961639005544 38.0 35.0 40.0 30.0 41.0 51 35.389797450685734 38.0 35.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 1.0 14 3.0 15 3.0 16 21.0 17 54.0 18 93.0 19 201.0 20 403.0 21 751.0 22 1154.0 23 1905.0 24 3412.0 25 6538.0 26 10076.0 27 11897.0 28 11370.0 29 11072.0 30 12226.0 31 14909.0 32 18636.0 33 25202.0 34 45538.0 35 88546.0 36 93716.0 37 69683.0 38 119265.0 39 360083.0 40 228.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.614435235708484 19.727802652512874 25.164583032429277 28.49317907934936 2 33.49599609256562 19.801673449181852 26.576287033249574 20.126043425002948 3 21.184049641175363 22.14062133057843 37.67884726275622 18.99648176548999 4 22.457163207051025 23.8524392247315 35.54442225870435 18.145975309513126 5 19.82648080627218 29.31722435442988 30.86211629909514 19.994178540202803 6 71.3226952035802 1.5383869043615745 22.53158527832201 4.60733261373622 7 71.9643788403167 1.3093874346877417 18.269791585123965 8.456442139871598 8 58.573036718196136 3.0954068902709957 27.800447414466987 10.531108977065875 9 31.229595948793204 19.48524182762966 30.168171830088347 19.116990393488788 10 24.24097756422625 18.32139088787185 44.738910835743326 12.69872071215858 11 21.991446423275253 15.44031956286129 40.718906182985684 21.849327830877773 12 16.263482798578593 20.69308448062766 44.35224682989541 18.691185890898346 13 11.674893521310622 24.158286373925154 43.08034606814415 21.08647403662007 14 9.702653505169302 22.916374950523107 46.27972334835373 21.101248195953865 15 10.19703656824945 18.40297952896893 48.91834410340147 22.481639799380147 16 10.069912645026566 25.70769877032687 40.34492149298393 23.877467091662634 17 12.747012367294422 22.722987820138943 41.7396462360624 22.790353576504234 18 14.135342324989608 29.764859331259807 39.487358722101376 16.612439621649216 19 14.13776793323844 23.76313273920632 36.89295019013461 25.20614913742063 20 11.411494516471533 31.727948189007805 34.825449922766424 22.035107371754233 21 12.930917574524056 24.650133573836065 36.13263225904614 26.286316592593735 22 10.534967899279925 27.661967234442752 32.44978715287616 29.353277713401155 23 10.425595018241676 23.608555340803473 43.521806769431606 22.444042871523248 24 16.606375601027136 21.75770599202416 38.628803656935204 23.007114750013507 25 11.447658130363212 26.138905764016982 38.57047880404283 23.842957301576977 26 14.488378580115082 21.799602861776716 38.082821291107166 25.62919726700103 27 21.137632319686347 22.903364869915734 38.61843969441746 17.34056311598046 28 15.438445229214468 23.1272926132511 34.44231407437135 26.99194808316308 29 16.19291964952166 23.462467571271535 38.339163981040564 22.005448798166242 30 24.00856019201997 21.727826908595365 32.482312354394594 21.78130054499007 31 17.61190047508845 25.564146863964172 34.790388858078764 22.033563802868613 32 17.38642916286747 21.431902702237842 38.97776048000583 22.20390765488887 33 16.18762741334239 21.314811976771495 39.956383153489185 22.541177456396934 34 15.77395095199611 26.60914299952921 37.17674635524797 20.440159693226708 35 15.525767126172424 21.835435710907188 40.279650580106264 22.359146582814123 36 14.342511320423954 24.461266895188366 38.52902295397188 22.667198830415806 37 13.718137706190484 25.49997850029052 39.81547736521612 20.96640642830288 38 12.281405838439055 24.19389871321482 32.57922642942748 30.945469018918644 39 18.324037005961483 19.161753891171777 36.20826713444154 26.305941968425195 40 13.253964491300335 16.848274896387938 41.46852938679521 28.429231225516517 41 18.106834812770607 21.90335274187449 32.07414863906839 27.915663806286517 42 19.266496065553167 17.10428682156013 37.767381963838595 25.86183514904811 43 21.81294370714529 20.981842117159083 36.52447824615293 20.680735929542696 44 14.422776902476214 24.107128090858875 38.47091861092031 22.9991763957446 45 17.806279899756227 21.319552938348757 36.80761288174388 24.066554280151138 46 22.069286397078685 18.690193596614733 35.0495981759426 24.190921830363983 47 15.561820485143702 16.524125430407647 39.87071508033725 28.043339004111406 48 17.10031764442568 15.161264359325196 33.846386229601464 33.89203176664767 49 19.050506676486705 15.095442171845525 40.65694291772006 25.197108233947713 50 17.1550040849448 14.412412939958477 40.948567182181925 27.4840157929148 51 14.91837276968078 14.031041170289827 39.25505160481549 31.795534455213897 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 196.0 1 1408.0 2 2620.0 3 34733.0 4 66846.0 5 36260.0 6 5674.0 7 5237.5 8 4801.0 9 5091.0 10 5381.0 11 5588.0 12 5795.0 13 5663.0 14 5531.0 15 5232.0 16 4933.0 17 4411.5 18 3890.0 19 3592.5 20 3295.0 21 3125.5 22 2956.0 23 2716.5 24 2477.0 25 2643.5 26 3292.0 27 3774.0 28 4192.5 29 4611.0 30 5263.5 31 5916.0 32 6972.5 33 8029.0 34 9738.0 35 11447.0 36 13179.0 37 14911.0 38 18491.0 39 22071.0 40 28017.5 41 33964.0 42 46597.0 43 59230.0 44 84086.0 45 108942.0 46 135892.0 47 162842.0 48 156438.0 49 150034.0 50 116126.0 51 82218.0 52 62636.0 53 43054.0 54 33144.0 55 23234.0 56 19489.0 57 15744.0 58 13933.0 59 12122.0 60 10219.5 61 8317.0 62 7034.0 63 5751.0 64 5006.5 65 4262.0 66 3443.5 67 2625.0 68 2196.0 69 1767.0 70 1556.0 71 1345.0 72 1362.0 73 1379.0 74 1166.0 75 757.0 76 561.0 77 479.5 78 398.0 79 288.0 80 178.0 81 122.0 82 66.0 83 45.5 84 25.0 85 15.5 86 6.0 87 3.5 88 1.0 89 1.0 90 1.0 91 2.0 92 3.0 93 2.0 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 906989.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.871638990989815 #Duplication Level Percentage of deduplicated Percentage of total 1 71.9439885442012 20.051968762758833 2 12.13145966272388 6.762473283063901 3 4.936735557423403 4.1278473375146385 4 2.5418261283669867 2.8337944091083993 5 1.492319733094289 2.079669842996715 6 0.9733802825152824 1.627782230112818 7 0.6962768006044016 1.3584462936973094 8 0.47449413902173365 1.0579943476923435 9 0.3890955275683062 0.97602570696533 >10 3.6532052224376534 22.381882629356866 >50 0.49363974296969093 9.291250344359339 >100 0.25321002898164097 12.855115151729061 >500 0.012380932016452476 2.386930087272057 >1k 0.006390158460104505 3.024209141025381 >5k 0.0011981547112695945 2.258361125335797 >10k+ 3.9938490375653155E-4 6.926249307011237 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 62222 6.860281657219658 No Hit CCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCTGC 7540 0.83132209982701 RNA PCR Primer, Index 10 (95% over 23bp) CTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCTGCT 7266 0.8011122516370098 TruSeq Adapter, Index 10 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCTGC 5482 0.6044174736408049 Illumina PCR Primer Index 2 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCTG 3487 0.3844589074398918 TruSeq Adapter, Index 10 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCTGC 2681 0.29559344159631484 Illumina PCR Primer Index 2 (95% over 22bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCC 2505 0.27618857560565785 No Hit ACCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCTG 2274 0.2507196889929205 TruSeq Adapter, Index 10 (95% over 22bp) GCCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCTG 1969 0.21709193827047515 Illumina PCR Primer Index 2 (95% over 21bp) CGTTCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTC 1705 0.18798463928448966 No Hit AGCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCTG 1658 0.18280265802562104 TruSeq Adapter, Index 10 (95% over 22bp) TGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCTGCTT 1416 0.15612096728846767 Illumina PCR Primer Index 2 (95% over 24bp) ACTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCTGC 1416 0.15612096728846767 TruSeq Adapter, Index 10 (95% over 23bp) TCCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCTG 1394 0.15369535903963555 TruSeq Adapter, Index 10 (95% over 22bp) GGCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCTG 1141 0.1258008641780661 RNA PCR Primer, Index 10 (95% over 22bp) TGCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCTG 1140 0.12569060925766465 TruSeq Adapter, Index 10 (95% over 22bp) CGTCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCT 1117 0.12315474608843106 TruSeq Adapter, Index 10 (95% over 21bp) CGTTTTTCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTC 1115 0.12293423624762814 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCT 1083 0.11940607879478142 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTT 1067 0.11764200006835804 No Hit CGGCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCT 943 0.10397038993857698 TruSeq Adapter, Index 10 (95% over 21bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGC 937 0.10330886041616821 No Hit ATGCCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTC 929 0.10242682105295654 No Hit ATCTGTCTCTTATACACATCTGACGCTGATTACCTCGTATGCCGTCTTCTG 907 0.10000121280412443 TruSeq Adapter, Index 10 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.8191940585828494 0.0 2 0.0 0.0 0.0 2.7559319903548998 0.0 3 0.0 0.0 0.0 4.637983481607826 0.0 4 0.0 0.0 0.0 5.820467502913487 0.0 5 0.0 0.0 0.0 11.754277063999673 0.0 6 0.0 0.0 0.0 13.329378856854934 0.0 7 0.0 0.0 0.0 18.44774302665192 0.0 8 0.0 0.0 0.0 24.55377077340519 0.0 9 0.0 0.0 0.0 29.3490880264259 0.0 10 0.0 0.0 0.0 32.01979296331047 0.0 11 0.0 0.0 0.0 34.43448597502285 0.0 12 0.0 0.0 0.0 36.19613909319738 0.0 13 0.0 0.0 0.0 36.890193817124576 0.0 14 0.0 0.0 0.0 37.38137948751308 0.0 15 0.0 0.0 0.0 38.89187189701308 0.0 16 0.0 0.0 0.0 40.70997553443316 0.0 17 0.0 0.0 0.0 42.827090515982 0.0 18 1.1025492040146021E-4 0.0 0.0 43.80394911073894 0.0 19 1.1025492040146021E-4 0.0 0.0 44.939464535953576 0.0 20 1.1025492040146021E-4 0.0 0.0 46.039147112037746 0.0 21 1.1025492040146021E-4 0.0 0.0 47.09913791677738 0.0 22 3.3076476120438066E-4 0.0 0.0 48.147662209795264 0.0 23 3.3076476120438066E-4 0.0 0.0 48.934992596382095 0.0 24 0.0017640787264233634 0.0 0.0 49.59641186387046 0.0 25 0.0017640787264233634 0.0 0.0 50.18605517817746 0.0 26 0.0017640787264233634 0.0 0.0 50.78231378770856 0.0 27 0.0017640787264233634 0.0 0.0 51.37217761185637 0.0 28 0.0017640787264233634 0.0 0.0 51.938005863356665 0.0 29 0.0017640787264233634 0.0 0.0 52.64374760884641 0.0 30 0.0017640787264233634 0.0 0.0 53.23769086504908 0.0 31 0.0017640787264233634 0.0 0.0 53.74298916524897 0.0 32 0.0017640787264233634 0.0 0.0 54.24520032767762 0.0 33 0.0017640787264233634 0.0 0.0 54.73120401680726 0.0 34 0.0017640787264233634 0.0 0.0 55.309821839074125 0.0 35 0.0017640787264233634 0.0 0.0 55.75756707082445 0.0 36 0.0017640787264233634 0.0 0.0 56.182710043892484 0.0 37 0.0017640787264233634 0.0 0.0 56.63828337499132 0.0 38 0.0017640787264233634 0.0 0.0 57.08073637056238 0.0 39 0.0017640787264233634 0.0 0.0 57.52329962105384 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCGG 20 7.032498E-4 45.000004 1 CCTTCGC 40 6.8121153E-9 45.000004 42 CTTCGCG 40 6.8121153E-9 45.000004 43 AACAATG 20 7.032498E-4 45.000004 20 GGTACTA 70 0.0 45.000004 7 GATCGGA 20 7.032498E-4 45.000004 8 CGGCCTA 20 7.032498E-4 45.000004 5 GGCACGG 75 0.0 45.000004 1 AGCTTAC 20 7.032498E-4 45.000004 10 CGTTGAA 20 7.032498E-4 45.000004 11 ATTACGG 75 0.0 45.000004 1 CCGGAGG 20 7.032498E-4 45.000004 1 CGCGCAG 30 2.164994E-6 45.000004 34 TGAACCG 20 7.032498E-4 45.000004 12 CTAAGTG 20 7.032498E-4 45.000004 23 CACTAGG 35 1.2115561E-7 45.000004 1 GAGCGAT 20 7.032498E-4 45.000004 18 CGAGGGT 40 6.8121153E-9 45.000004 3 TCTCGCG 30 2.164994E-6 45.000004 31 GAACGTA 20 7.032498E-4 45.000004 7 >>END_MODULE