##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043263_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2099488 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.45995833269826 33.0 31.0 34.0 31.0 34.0 2 32.75280115913975 34.0 31.0 34.0 31.0 34.0 3 32.855337587068846 34.0 31.0 34.0 31.0 34.0 4 36.303210592296786 37.0 37.0 37.0 35.0 37.0 5 36.292663735158285 37.0 37.0 37.0 35.0 37.0 6 36.42239345973876 37.0 37.0 37.0 35.0 37.0 7 36.3945452415065 37.0 37.0 37.0 35.0 37.0 8 36.3187924865491 37.0 37.0 37.0 35.0 37.0 9 37.879206739928975 39.0 38.0 39.0 35.0 39.0 10 37.7137945060891 39.0 37.0 39.0 35.0 39.0 11 37.389435424255815 39.0 37.0 39.0 35.0 39.0 12 37.376730421893335 39.0 37.0 39.0 35.0 39.0 13 37.37696762258227 39.0 37.0 39.0 35.0 39.0 14 38.74606094438263 40.0 38.0 41.0 35.0 41.0 15 38.801546377021445 41.0 38.0 41.0 35.0 41.0 16 38.708303643555 41.0 38.0 41.0 34.0 41.0 17 38.695001352710754 40.0 38.0 41.0 34.0 41.0 18 38.53590113399076 40.0 38.0 41.0 34.0 41.0 19 38.341845249889495 40.0 37.0 41.0 35.0 41.0 20 38.117266685972965 40.0 35.0 41.0 35.0 41.0 21 38.05251994772059 40.0 35.0 41.0 35.0 41.0 22 38.016043911658464 40.0 35.0 41.0 34.0 41.0 23 37.99483874163606 40.0 35.0 41.0 35.0 41.0 24 37.91348128686613 40.0 35.0 41.0 34.0 41.0 25 37.89818088981695 40.0 35.0 41.0 34.0 41.0 26 37.857837720434695 40.0 35.0 41.0 34.0 41.0 27 37.85564099437577 40.0 35.0 41.0 34.0 41.0 28 37.77052309896508 40.0 35.0 41.0 34.0 41.0 29 37.69940480726729 40.0 35.0 41.0 34.0 41.0 30 37.6027817258303 40.0 35.0 41.0 34.0 41.0 31 37.4994208111692 40.0 35.0 41.0 34.0 41.0 32 37.24564417610389 40.0 35.0 41.0 33.0 41.0 33 36.88912058559039 40.0 35.0 41.0 33.0 41.0 34 36.57089014083434 40.0 35.0 41.0 31.0 41.0 35 36.408924937889616 39.0 35.0 41.0 31.0 41.0 36 36.34702889466384 39.0 35.0 41.0 31.0 41.0 37 36.28083323172126 39.0 35.0 41.0 31.0 41.0 38 36.21465709734945 39.0 35.0 41.0 31.0 41.0 39 36.161488896340444 39.0 35.0 41.0 30.0 41.0 40 36.086494897803654 39.0 35.0 41.0 30.0 41.0 41 36.011523761983874 39.0 35.0 41.0 30.0 41.0 42 35.89750072398604 39.0 35.0 41.0 30.0 41.0 43 35.7843021727202 38.0 35.0 41.0 30.0 41.0 44 35.67002812114192 38.0 35.0 41.0 29.0 41.0 45 35.627807827432214 38.0 35.0 41.0 29.0 41.0 46 35.549360129707814 38.0 35.0 40.0 29.0 41.0 47 35.42788098812663 38.0 35.0 40.0 28.0 41.0 48 35.36500089545642 38.0 35.0 40.0 28.0 41.0 49 35.293387244890184 37.0 35.0 40.0 28.0 41.0 50 35.22994606304013 37.0 35.0 40.0 27.0 41.0 51 34.829841847155116 37.0 35.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 2.0 13 4.0 14 10.0 15 18.0 16 49.0 17 131.0 18 256.0 19 578.0 20 1106.0 21 1843.0 22 2971.0 23 4684.0 24 8223.0 25 15762.0 26 25935.0 27 33484.0 28 35147.0 29 33536.0 30 33328.0 31 36283.0 32 42220.0 33 56229.0 34 141667.0 35 199246.0 36 160693.0 37 160615.0 38 303696.0 39 801598.0 40 171.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.603206115014707 17.80572215702114 25.08521125150513 29.505860476459024 2 33.3647536923288 19.888134630919538 24.386278940389275 22.36083273636239 3 25.048059336371537 21.22865193799631 34.09521750064778 19.628071224984378 4 22.92025484308555 23.951744425307503 31.942359279976834 21.18564145163011 5 21.318483363562926 31.68143852215397 28.54743632733314 18.45264178694996 6 80.52477556432807 1.680838375832584 15.396372829947111 2.3980132298922405 7 80.92272973220138 1.4263477571674616 14.031659147373073 3.61926336325809 8 73.49206092151991 2.504515386608545 18.412108094926 5.591315596945541 9 37.91781615327166 17.98805232513832 23.79256275815818 20.301568763431845 10 32.04728962489902 22.87591069822738 30.769835312228505 14.306964364645095 11 29.449465774512646 18.084694935146093 33.58923699492448 18.876602295416784 12 23.70982830099529 18.37447987318813 36.46922487768446 21.446466948132116 13 19.314947263332773 21.304479949397187 37.92886646649088 21.451706320779163 14 19.76277073267387 21.263088905485528 38.760878842841684 20.21326151899892 15 22.873148119922572 17.414341020286848 39.46662233839869 20.245888521391883 16 20.70585780914204 20.487566492401957 37.440032998521545 21.36654269993446 17 20.766444009206054 22.27333521315673 37.482233763660474 19.47798701397674 18 21.553016735508848 27.46679190354982 33.39256999801856 17.58762136292277 19 22.642425200810866 23.487869423402277 32.91769231355454 20.952013062232318 20 21.449181895776494 27.24307069152098 33.9080766358274 17.399670776875123 21 18.586864988035178 21.346109146610985 35.70980162782545 24.35722423752839 22 20.07741887545916 23.64295485375482 33.76323179746681 22.51639447331921 23 20.892569998018566 21.768354951302413 37.41459822585316 19.924476824825863 24 23.09062971543538 20.562965827858985 34.10321945159963 22.243185005106007 25 18.146186117758234 21.829226935328993 36.70290089774269 23.321686049170083 26 17.470640460912374 20.976114176408725 36.27289129540154 25.280354067277354 27 21.097572360499324 23.164409608437868 36.07708165038333 19.66093638067948 28 23.26433873401515 22.797986937767682 32.87472945784877 21.062944870368394 29 22.07604901766526 20.51428729290189 37.56963602554528 19.84002766388758 30 26.74756893109177 20.15210375100977 32.78723193464311 20.313095383255348 31 27.28465225807435 19.45707715404899 32.640338977884134 20.61793160999253 32 25.51584005243183 19.223020088707344 33.23438857473822 22.026751284122607 33 24.16522504534439 19.828358152082792 35.49036717523511 20.51604962733771 34 25.08025766282065 20.550629486808212 34.13956164550595 20.22955120486519 35 25.236248075721317 23.411707997378407 31.235758432532123 20.11628549436815 36 25.57895067749851 21.7920750201954 32.620715145787926 20.00825915651816 37 26.153471703577253 23.62075896599552 30.339206511301803 19.886562819125427 38 23.54083471779786 20.843081741834197 30.53596876952857 25.08011477083937 39 23.094487798930025 19.08293831638952 34.929373256717824 22.893200627962624 40 19.798112682711213 20.10009106982274 37.1492001859501 22.95259606151595 41 21.157825145940343 23.582940221615935 31.400989193555763 23.858245438887955 42 20.511905759880506 19.480606700300264 33.34441540032618 26.663072139493053 43 23.26619632977183 20.301378240790136 33.26434826014724 23.1680771692908 44 22.811704567970857 21.539727781249525 33.8344396348062 21.81412801597342 45 23.57898687680044 21.40793374384612 32.568369049977896 22.444710329375543 46 23.008895502141474 21.11205208126934 32.18732376655642 23.69172865003277 47 20.737246414363884 21.869903519334237 34.62753776158758 22.765312304714293 48 22.725731225898883 20.081372220274655 32.02399823194988 25.168898321876572 49 22.048613757258913 18.021727202060692 35.11156053285372 24.81809850782667 50 20.51523990611044 18.95824124738984 36.68046685668125 23.84605198981847 51 19.312470468990533 17.319413114054473 36.515569510280606 26.85254690667439 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 398.0 1 2489.0 2 4580.0 3 59595.5 4 114611.0 5 66507.5 6 18404.0 7 16724.0 8 15044.0 9 14588.0 10 14132.0 11 13579.5 12 13027.0 13 12207.0 14 11387.0 15 10614.0 16 9841.0 17 9205.5 18 8570.0 19 7916.5 20 7263.0 21 7044.5 22 6826.0 23 6645.0 24 6464.0 25 6777.0 26 8497.0 27 9904.0 28 11010.5 29 12117.0 30 13556.0 31 14995.0 32 17992.5 33 20990.0 34 25079.0 35 29168.0 36 32464.5 37 35761.0 38 40237.5 39 44714.0 40 49938.5 41 55163.0 42 64543.0 43 73923.0 44 83064.0 45 92205.0 46 103251.0 47 114297.0 48 143124.0 49 171951.0 50 198322.0 51 224693.0 52 223923.0 53 223153.0 54 199143.5 55 175134.0 56 153579.5 57 132025.0 58 117741.5 59 103458.0 60 96268.0 61 89078.0 62 81722.0 63 74366.0 64 69733.5 65 65101.0 66 50893.0 67 36685.0 68 28258.0 69 19831.0 70 16657.5 71 13484.0 72 13409.5 73 13335.0 74 11113.0 75 6450.5 76 4010.0 77 2951.5 78 1893.0 79 1352.5 80 812.0 81 572.0 82 332.0 83 271.0 84 210.0 85 159.0 86 108.0 87 71.0 88 34.0 89 24.5 90 15.0 91 12.0 92 9.0 93 6.0 94 3.0 95 2.0 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2099488.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.855603864922273 #Duplication Level Percentage of deduplicated Percentage of total 1 74.64236430286981 20.792081315619562 2 10.05731833955649 5.603053512202068 3 3.5219816775405284 2.9432077928725007 4 1.7949791908905606 2.000009171489046 5 1.0965949642951618 1.5273157462837308 6 0.7677201705873773 1.2831185370595521 7 0.599116690151186 1.168213003280037 8 0.49748163889165575 1.1086121170430618 9 0.43453821844772444 1.0893892029523984 >10 5.846245583002481 37.12323982407999 >50 0.6051064659591641 10.92322265394816 >100 0.12600891368188355 5.7832390879093625 >500 0.006222596533468579 1.178142819294233 >1k 0.0036298479778566705 2.1226215288154915 >5k 3.45699807414921E-4 0.6747514597895042 >10k+ 3.45699807414921E-4 4.6797822273612715 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 82301 3.920050983858922 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 14894 0.7094110564099438 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 8774 0.4179114145925102 No Hit CCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC 5240 0.2495846606410706 No Hit CTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGCT 4222 0.20109664832568702 No Hit CGCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTG 3670 0.17480452376960479 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 3461 0.1648497157402186 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 2986 0.1422251520370681 No Hit CGTTCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTC 2938 0.1399388803365392 No Hit GCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC 2778 0.13231797466810954 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTT 2703 0.12874567513603316 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 2507 0.11941006569220686 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 2386 0.11364675578045694 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.20752678748342454 0.0 2 0.0 0.0 0.0 0.6943121370543676 0.0 3 0.0 0.0 0.0 1.219916474873874 0.0 4 0.0 0.0 0.0 1.5651435016537365 0.0 5 0.0 0.0 0.0 3.4529370970446127 0.0 6 0.0 0.0 0.0 4.169111707235288 0.0 7 0.0 0.0 0.0 6.211704949016141 0.0 8 0.0 0.0 0.0 8.421767592860736 0.0 9 0.0 0.0 0.0 10.904753920955967 0.0 10 0.0 0.0 0.0 12.163822798701398 0.0 11 0.0 0.0 0.0 13.014792177902422 0.0 12 0.0 0.0 0.0 13.68543187672423 0.0 13 0.0 0.0 0.0 14.042185523327593 0.0 14 0.0 0.0 0.0 14.283434818393818 0.0 15 0.0 0.0 0.0 14.911254553491137 0.0 16 0.0 0.0 0.0 15.559603103232789 0.0 17 0.0 0.0 0.0 16.34231774604094 0.0 18 0.0 0.0 0.0 16.793237208309836 0.0 19 0.0 0.0 0.0 17.30279001356521 0.0 20 0.0 0.0 0.0 17.89093340852627 0.0 21 0.0 0.0 0.0 18.460786629883096 0.0 22 0.0 0.0 0.0 19.066362846560686 0.0 23 0.0 0.0 0.0 19.581059763142253 0.0 24 0.0 0.0 0.0 20.024977518328278 0.0 25 0.0 0.0 0.0 20.434886981968937 0.0 26 0.0 0.0 0.0 20.8630389885534 0.0 27 0.0 0.0 0.0 21.319721760734044 0.0 28 0.0 0.0 0.0 21.774499306497585 0.0 29 0.0 0.0 0.0 22.257474203234313 0.0 30 0.0 0.0 0.0 22.68576910180006 0.0 31 0.0 0.0 0.0 23.122875672544925 0.0 32 0.0 0.0 0.0 23.585226493316465 0.0 33 0.0 0.0 0.0 24.024190659818014 0.0 34 0.0 0.0 0.0 24.506403465987898 0.0 35 4.7630660427685226E-5 0.0 0.0 24.93827066408572 0.0 36 4.7630660427685226E-5 0.0 0.0 25.39981176362999 0.0 37 4.7630660427685226E-5 0.0 0.0 25.997624182657866 0.0 38 4.7630660427685226E-5 0.0 0.0 26.576479598835526 0.0 39 4.7630660427685226E-5 0.0 0.0 27.20934818393818 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 22375 0.0 44.29609 1 GGTACGA 60 3.6379788E-12 41.250004 7 CACGACG 335 0.0 40.97015 25 CTAGCGG 555 0.0 40.945946 1 ATTGCGG 495 0.0 40.90909 1 CGTAGGG 815 0.0 40.58282 2 TAGCGGG 1550 0.0 40.5 2 GCGATAG 150 0.0 40.5 8 CGCACTT 3710 0.0 40.45148 34 GCGCGAC 1700 0.0 40.36765 8 TACGGGA 430 0.0 40.2907 3 ACCCGCA 3755 0.0 40.206394 31 CCCGCAC 3765 0.0 40.159363 32 GTCGGCG 1300 0.0 40.153843 3 TCGGCGT 1285 0.0 40.097275 4 TACGCGG 275 0.0 40.090908 1 CCGCACT 3730 0.0 40.05362 33 GCGTAGG 315 0.0 40.0 1 GCACTTA 3755 0.0 39.90679 35 TCACGAC 350 0.0 39.857143 24 >>END_MODULE