##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043262_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2190077 Sequences flagged as poor quality 0 Sequence length 52 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.327770210819075 33.0 31.0 34.0 31.0 34.0 2 32.661556648464874 34.0 31.0 34.0 31.0 34.0 3 32.74058537667854 34.0 31.0 34.0 31.0 34.0 4 36.21636910483056 37.0 37.0 37.0 35.0 37.0 5 36.14412826580983 37.0 37.0 37.0 35.0 37.0 6 36.325998583611444 37.0 37.0 37.0 35.0 37.0 7 36.25688822813079 37.0 37.0 37.0 35.0 37.0 8 36.23453193654835 37.0 37.0 37.0 35.0 37.0 9 37.8481843332449 39.0 38.0 39.0 35.0 39.0 10 37.692773359110205 39.0 37.0 39.0 35.0 39.0 11 37.40122972845247 39.0 37.0 39.0 35.0 39.0 12 37.401074482769324 39.0 37.0 39.0 35.0 39.0 13 37.37799492894542 39.0 37.0 39.0 35.0 39.0 14 38.63161477884111 40.0 38.0 41.0 34.0 41.0 15 38.732779715051116 41.0 38.0 41.0 35.0 41.0 16 38.68779271231103 41.0 38.0 41.0 34.0 41.0 17 38.60117657963624 40.0 38.0 41.0 34.0 41.0 18 38.35503317919872 40.0 38.0 41.0 34.0 41.0 19 38.08174324464391 40.0 37.0 41.0 34.0 41.0 20 37.645580041249694 39.0 35.0 41.0 34.0 41.0 21 37.630765037028375 39.0 35.0 41.0 34.0 41.0 22 37.605359994191986 39.0 35.0 41.0 34.0 41.0 23 37.596404601299405 39.0 35.0 41.0 34.0 41.0 24 37.52852114332053 39.0 35.0 41.0 34.0 41.0 25 37.41581049433422 39.0 35.0 41.0 34.0 41.0 26 37.284160785214404 39.0 35.0 41.0 33.0 41.0 27 37.29259793148825 39.0 35.0 41.0 33.0 41.0 28 37.284570359854925 39.0 35.0 41.0 33.0 41.0 29 37.118089455302254 39.0 35.0 41.0 33.0 41.0 30 37.07059203854477 39.0 35.0 41.0 33.0 41.0 31 36.829624711825204 39.0 35.0 41.0 33.0 41.0 32 36.472875611222804 38.0 35.0 41.0 31.0 41.0 33 35.99040946962139 38.0 35.0 41.0 30.0 41.0 34 35.82349068092127 38.0 35.0 41.0 29.0 41.0 35 35.63467494521882 38.0 35.0 41.0 28.0 41.0 36 35.64674712350296 38.0 35.0 41.0 29.0 41.0 37 35.57912666997553 38.0 35.0 41.0 29.0 41.0 38 35.46271797749577 38.0 35.0 41.0 28.0 41.0 39 35.41822091186748 38.0 35.0 41.0 27.0 41.0 40 35.390049756241446 38.0 35.0 40.0 27.0 41.0 41 35.34549835462406 38.0 35.0 40.0 27.0 41.0 42 35.290745485204404 38.0 35.0 40.0 27.0 41.0 43 35.20005232692732 38.0 35.0 40.0 26.0 41.0 44 35.011491376787205 37.0 35.0 40.0 25.0 41.0 45 34.915836292513916 37.0 35.0 40.0 24.0 41.0 46 34.886253314381186 37.0 35.0 40.0 24.0 41.0 47 34.8105199040947 37.0 35.0 40.0 24.0 41.0 48 34.734794712697315 37.0 35.0 40.0 23.0 41.0 49 34.68255454031981 36.0 35.0 40.0 24.0 41.0 50 34.58104441076729 36.0 35.0 40.0 24.0 41.0 51 34.4718929973695 36.0 34.0 40.0 24.0 41.0 52 34.12083776049883 35.0 34.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 1.0 12 4.0 13 10.0 14 12.0 15 40.0 16 69.0 17 181.0 18 365.0 19 885.0 20 1592.0 21 2716.0 22 4311.0 23 7108.0 24 12991.0 25 23800.0 26 35138.0 27 40938.0 28 41940.0 29 40424.0 30 41793.0 31 45971.0 32 53894.0 33 68765.0 34 143602.0 35 195370.0 36 233244.0 37 201405.0 38 302389.0 39 690261.0 40 857.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.480312336050282 16.453302783418117 22.545463013400898 33.520921867130696 2 38.671380047368196 18.034069121770603 22.346748538978307 20.947802291882887 3 23.80359229378693 19.85158512691563 36.951349199137745 19.393473380159694 4 22.204379115437494 22.1714122380172 35.22451493714605 20.39969370939926 5 20.856024696848557 28.82400938414494 32.33530145287129 17.984664466135207 6 72.56845307265452 2.120336408263271 21.820283031144566 3.490927487937639 7 72.01125805165755 1.9583786323494563 20.264173360114736 5.766189955878263 8 61.81047515680955 3.44074660388653 26.51121398927983 8.237564250024086 9 38.18692219497306 13.617375096857327 30.124237640959656 18.071465067209967 10 25.73882105515012 14.738066287167072 39.42998351199524 20.09312914568757 11 22.878465003741876 12.320206093210421 42.10746928076045 22.693859622287253 12 20.70612129162582 13.220402752962567 44.82874346427089 21.244732491140724 13 17.086339886679784 15.881542064502755 46.01879294654937 21.013325102268094 14 14.766467115083168 16.712882697731633 47.292583776734794 21.22806641045041 15 17.9750757621764 16.083955039023742 45.42954425803294 20.511424940766922 16 19.07686350753878 19.178686411482335 41.05613638241943 20.68831369855946 17 17.9816052129674 18.960292263696665 42.45754829624712 20.600554227088818 18 19.594379558344297 24.23512963242845 38.60279798381518 17.567692825412074 19 20.508685311064408 20.62411504253047 36.689760223042384 22.177439423362742 20 18.306799258656202 25.34632343976947 37.69050129287692 18.65637600869741 21 18.80308317926721 20.049614693912588 37.57443231448027 23.57286981233993 22 19.351191761750844 21.609970790981322 35.130454317359614 23.908383129908216 23 18.088953036811034 19.421919868570832 39.08816904611116 23.400958048506972 24 22.42523892995543 17.83832257952574 36.44917507466632 23.287263415852504 25 16.94639046937619 19.497761950835518 38.567822044613045 24.988025535175247 26 16.53014939657373 19.80510274296292 37.80853367256037 25.85621418790298 27 20.237781593980486 19.95372765432448 36.988471181606855 22.820019570088174 28 20.780045633098744 20.57210773867768 33.57649068959676 25.071355938626816 29 19.765789056731794 20.589230424318412 34.91210583006899 24.732874688880802 30 22.089360328426807 18.40592819339229 32.28461830337472 27.22009317480618 31 23.381232714648846 19.299549741858392 31.579346296956682 25.73987124653608 32 21.398791001412278 19.69159075228862 33.77310478124741 25.136513465051685 33 17.05739113282318 19.28037233394077 35.87828190515676 27.78395462807929 34 19.270966271962127 20.118105436475524 34.70649662089507 25.90443167066729 35 19.49461137667762 20.327869750698262 35.58441095906674 24.593107913557375 36 21.833844198172027 19.103026971197817 34.756768825936255 24.3063600046939 37 20.574847368380198 21.2814891896495 36.06539861383869 22.078264828131612 38 19.797842724251247 18.06689901770577 37.67483974307753 24.460418514965458 39 20.9667513973253 17.417058852268667 41.23439495506322 20.381794795342813 40 17.95151494673475 17.367334573167977 41.07695756815856 23.60419291193871 41 20.29024550278369 20.834472943188757 34.236147861467884 24.639133692559668 42 18.872532792226025 16.762606976832323 37.17695770514005 27.187902525801604 43 21.276420874699838 18.376431513595186 36.96742169339252 23.37972591831246 44 20.453070828103304 19.35142006422605 36.07224768809498 24.12326141957566 45 20.63064449332147 19.94336272194996 34.73745443653351 24.688538348195063 46 21.66700074928872 18.72705845502236 35.039452950741 24.56648784494792 47 19.48027398123445 18.204839373227514 36.89893095082958 25.415955694708455 48 20.528501965912614 16.434034054510413 34.322628839077346 28.714835140499627 49 20.088426114698247 16.200982887816274 38.35216752652989 25.35842347095559 50 20.31353235525509 15.089515117505 39.01401640216303 25.582936125076884 51 18.249677979358715 14.551040899475224 38.804206427445244 28.39507469372081 52 15.673649830576734 15.203118429169384 43.03410336714188 26.089128373111997 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 589.0 1 3290.5 2 5992.0 3 89562.0 4 173132.0 5 97236.0 6 21340.0 7 19493.5 8 17647.0 9 17344.5 10 17042.0 11 16719.5 12 16397.0 13 15704.0 14 14061.0 15 13111.0 16 12457.5 17 11804.0 18 11040.5 19 10277.0 20 9692.5 21 9108.0 22 8599.0 23 8090.0 24 8032.5 25 7975.0 26 8703.0 27 9431.0 28 9499.0 29 9567.0 30 10286.5 31 11006.0 32 12225.5 33 13445.0 34 15549.5 35 17654.0 36 20212.5 37 22771.0 38 25643.5 39 30944.5 40 33373.0 41 39481.0 42 45589.0 43 58600.5 44 71612.0 45 94542.0 46 117472.0 47 156454.5 48 195437.0 49 220071.5 50 244706.0 51 232267.5 52 219829.0 53 189712.0 54 159595.0 55 142042.5 56 124490.0 57 112028.0 58 99566.0 59 94921.0 60 90276.0 61 87546.5 62 84817.0 63 83819.5 64 73207.5 65 63593.0 66 52804.5 67 42016.0 68 33330.0 69 24644.0 70 20444.5 71 16245.0 72 15355.0 73 14465.0 74 11953.5 75 9442.0 76 7197.0 77 4952.0 78 3903.5 79 2855.0 80 2069.5 81 1284.0 82 947.0 83 610.0 84 405.0 85 200.0 86 182.0 87 164.0 88 104.0 89 41.0 90 38.0 91 32.0 92 26.0 93 16.5 94 7.0 95 4.5 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2190077.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.24659172192264 #Duplication Level Percentage of deduplicated Percentage of total 1 74.63985002916935 23.322409200469906 2 10.508767010191242 6.5672630453651095 3 3.803327839060075 3.565230965151975 4 1.9404803005348612 2.4253358278098625 5 1.2296348269820065 1.9210948702881876 6 0.8738430767037939 1.6382770708075307 7 0.6959154678883234 1.5221490548654044 8 0.5969775484771487 1.4922810979535799 9 0.5098038825033236 1.4336670397349138 >10 4.796456515366064 29.020213597111937 >50 0.23435166697982637 5.061694486906867 >100 0.15914104627902514 8.99744830356148 >500 0.005284979937730503 1.1090366683287782 >1k 0.004844564942919628 2.893302676848631 >5k 0.0010276349878920424 2.156926549261177 >10k+ 2.936099965405835E-4 6.873669545534768 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 138270 6.313476649451139 No Hit CCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTGCT 11576 0.5285658906056727 TruSeq Adapter, Index 15 (95% over 22bp) CTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTGCTT 9421 0.4301675237902594 TruSeq Adapter, Index 14 (95% over 24bp) GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 7709 0.35199675627843224 No Hit CGCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTGC 7581 0.346152212913062 TruSeq Adapter, Index 14 (95% over 22bp) CGTTCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCT 6411 0.2927294337139745 No Hit CGTTTCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTC 5510 0.25158932768117287 No Hit GCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTGCT 5364 0.24492289540504739 TruSeq Adapter, Index 15 (95% over 22bp) CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA 5025 0.22944398758582463 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCG 4974 0.2271153023386849 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTT 4397 0.2007691966994768 No Hit CGTCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTG 3324 0.1517754855194589 TruSeq Adapter, Index 14 (95% over 21bp) CGTTTTTCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCT 3192 0.14574830017392082 No Hit AGCCCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCT 2580 0.11780407720824426 No Hit TCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTGCT 2577 0.11766709572311841 TruSeq Adapter, Index 15 (95% over 22bp) GGGCCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCT 2567 0.11721049077269886 No Hit AGGCCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCT 2463 0.11246179928833552 No Hit GCCTGTCTCTTATACACATCTGACGCACCTCGTTTCGTATGCCGTCTTCTGC 2405 0.10981349057590213 TruSeq Adapter, Index 15 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4439113327978879 0.0 2 0.0 0.0 0.0 1.4327806739215105 0.0 3 0.0 0.0 0.0 2.39215333524803 0.0 4 0.0 0.0 0.0 3.059207507315953 0.0 5 0.0 0.0 0.0 6.134715811361883 0.0 6 0.0 0.0 0.0 7.443117296789108 0.0 7 0.0 0.0 0.0 10.68122262367944 0.0 8 0.0 0.0 0.0 14.341778850697944 0.0 9 0.0 0.0 0.0 17.614586153820163 0.0 10 0.0 0.0 0.0 19.462694690643296 0.0 11 0.0 0.0 0.0 21.058894276319965 0.0 12 0.0 0.0 0.0 22.13333138515221 0.0 13 0.0 0.0 0.0 22.684773183773903 0.0 14 0.0 0.0 0.0 23.07836665103556 0.0 15 0.0 0.0 0.0 24.000617329892968 0.0 16 0.0 0.0 0.0 24.905380039149307 0.0 17 0.0 0.0 0.0 26.068763792323285 0.0 18 0.0 0.0 0.0 26.739105520034226 0.0 19 0.0 0.0 0.0 27.503325225551432 0.0 20 0.0 0.0 0.0 28.351377599965662 0.0 21 0.0 0.0 0.0 29.217922474871887 0.0 22 9.13209900839103E-5 0.0 0.0 29.95944891435324 0.0 23 1.3698148512586545E-4 0.0 0.0 30.675131513640846 0.0 24 4.109444553775963E-4 0.0 0.0 31.246846572061166 0.0 25 4.566049504195515E-4 0.0 0.0 31.820114087312913 0.0 26 4.566049504195515E-4 0.0 0.0 32.35557471266992 0.0 27 4.566049504195515E-4 0.0 0.0 32.88414060327559 0.0 28 4.566049504195515E-4 0.0 0.0 33.41129101853497 0.0 29 4.566049504195515E-4 0.0 0.0 33.96583773081951 0.0 30 4.566049504195515E-4 0.0 0.0 34.4988783499393 0.0 31 4.566049504195515E-4 0.0 0.0 35.021508376189516 0.0 32 4.566049504195515E-4 0.0 0.0 35.57655735391952 0.0 33 4.566049504195515E-4 0.0 0.0 36.09982662710033 0.0 34 4.566049504195515E-4 0.0 0.0 36.668665074333006 0.0 35 4.566049504195515E-4 0.0 0.0 37.16855617405233 0.0 36 4.566049504195515E-4 0.0 0.0 37.72360515178234 0.0 37 4.566049504195515E-4 0.0 0.0 38.344131279402504 0.0 38 4.566049504195515E-4 0.0 0.0 39.067165218391864 0.0 39 5.479259405034618E-4 0.0 0.0 39.755679823129505 0.0 40 6.39246930587372E-4 0.0 0.0 40.379767469362946 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCGGTA 20 6.3127134E-4 46.0 10 ACCCACG 20 6.3127134E-4 46.0 22 CGTTTTT 32785 0.0 45.466827 1 AATGCGG 280 0.0 42.714287 1 GCGATAT 65 0.0 42.46154 8 GCGTAGG 285 0.0 41.96491 1 ATTGCGG 375 0.0 41.706665 1 CGGTCTA 310 0.0 41.54839 30 TATGCGG 355 0.0 41.464787 1 GTTTTTT 36290 0.0 41.34803 2 ACCCGCA 2100 0.0 41.180954 31 TCAACGC 2440 0.0 41.09836 15 TCACGAC 325 0.0 41.046154 24 ACGGGTA 185 0.0 41.027027 4 CACGACG 315 0.0 40.888893 25 ATATCGG 90 0.0 40.88889 1 TCCGTAC 45 1.5896148E-8 40.88889 46 CAACGCA 2415 0.0 40.857143 16 TATGACC 2260 0.0 40.809734 27 ACGTAGG 175 0.0 40.74286 1 >>END_MODULE