##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043260_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2370054 Sequences flagged as poor quality 0 Sequence length 52 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.413230669005856 33.0 31.0 34.0 31.0 34.0 2 32.754718668857336 34.0 31.0 34.0 31.0 34.0 3 32.89095227366128 34.0 31.0 34.0 31.0 34.0 4 36.285285482946804 37.0 37.0 37.0 35.0 37.0 5 36.23907134605372 37.0 37.0 37.0 35.0 37.0 6 36.3549919115767 37.0 37.0 37.0 35.0 37.0 7 36.305165620698936 37.0 37.0 37.0 35.0 37.0 8 36.29454603144063 37.0 37.0 37.0 35.0 37.0 9 37.904969253865104 39.0 38.0 39.0 35.0 39.0 10 37.71078633651385 39.0 37.0 39.0 35.0 39.0 11 37.38483848891207 39.0 37.0 39.0 35.0 39.0 12 37.388273853675905 39.0 37.0 39.0 35.0 39.0 13 37.40090858689296 39.0 37.0 39.0 35.0 39.0 14 38.71453182079396 40.0 38.0 41.0 35.0 41.0 15 38.76935420036843 41.0 38.0 41.0 35.0 41.0 16 38.66527429332834 41.0 38.0 41.0 34.0 41.0 17 38.63266490974467 40.0 38.0 41.0 34.0 41.0 18 38.43833600415856 40.0 37.0 41.0 34.0 41.0 19 38.259235865511926 40.0 37.0 41.0 34.0 41.0 20 37.98401935145782 40.0 35.0 41.0 34.0 41.0 21 37.92553460807222 40.0 35.0 41.0 34.0 41.0 22 37.87923186560306 40.0 35.0 41.0 34.0 41.0 23 37.896538644267174 40.0 35.0 41.0 34.0 41.0 24 37.82099521783048 40.0 35.0 41.0 34.0 41.0 25 37.73996162112762 40.0 35.0 41.0 34.0 41.0 26 37.63495388712662 40.0 35.0 41.0 34.0 41.0 27 37.67752506904906 40.0 35.0 41.0 34.0 41.0 28 37.64883922476028 40.0 35.0 41.0 34.0 41.0 29 37.56122729693079 39.0 35.0 41.0 34.0 41.0 30 37.49042173722624 40.0 35.0 41.0 34.0 41.0 31 37.382025894768645 40.0 35.0 41.0 33.0 41.0 32 37.16914509120889 39.0 35.0 41.0 33.0 41.0 33 36.78685000426151 39.0 35.0 41.0 32.0 41.0 34 36.598382990429755 39.0 35.0 41.0 32.0 41.0 35 36.40107145238041 39.0 35.0 41.0 31.0 41.0 36 36.34717943135473 39.0 35.0 41.0 31.0 41.0 37 36.30216526712049 39.0 35.0 41.0 31.0 41.0 38 36.20569868872186 39.0 35.0 41.0 31.0 41.0 39 36.17829846914881 38.0 35.0 41.0 31.0 41.0 40 36.11090338026053 38.0 35.0 41.0 31.0 41.0 41 36.06763390201236 38.0 35.0 41.0 31.0 41.0 42 35.99895867351545 38.0 35.0 41.0 31.0 41.0 43 35.89271763428175 38.0 35.0 41.0 31.0 41.0 44 35.71855324815384 38.0 35.0 40.0 30.0 41.0 45 35.604251633085156 37.0 35.0 40.0 30.0 41.0 46 35.576259021946335 37.0 35.0 40.0 30.0 41.0 47 35.491305261399106 37.0 35.0 40.0 30.0 41.0 48 35.400282862753336 37.0 35.0 40.0 30.0 41.0 49 35.35353371695329 36.0 35.0 40.0 30.0 41.0 50 35.25928354375048 36.0 35.0 40.0 30.0 41.0 51 35.14452793058724 36.0 35.0 40.0 29.0 41.0 52 34.77598105359625 35.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 5.0 13 3.0 14 12.0 15 33.0 16 71.0 17 162.0 18 371.0 19 728.0 20 1375.0 21 2296.0 22 3784.0 23 5910.0 24 10170.0 25 18260.0 26 27373.0 27 32814.0 28 34056.0 29 34140.0 30 36040.0 31 40955.0 32 50190.0 33 67482.0 34 164946.0 35 233260.0 36 217471.0 37 237128.0 38 344793.0 39 804215.0 40 2009.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.72269830138891 17.848538472119202 23.904560824352526 28.52420240213936 2 34.289725044239496 20.29190052209781 24.518513080292685 20.899861353370007 3 27.222713068984927 20.91129569199689 32.31095156481666 19.555039674201517 4 24.2253973960087 23.81675691777487 29.946153125624985 22.01169256059145 5 22.598936564314567 31.802777489458045 26.91174969009145 18.686536256135934 6 79.89885462525326 2.146955301440389 15.302900271470607 2.651289801835739 7 79.8941711876607 2.0894882563857196 13.88588614436633 4.130454411587246 8 70.91716053727046 3.604432641619136 18.86627899617477 6.612127824935635 9 43.467110875954724 15.6939884070152 23.36541699049895 17.473483726531125 10 28.939509395144587 16.66295367109779 32.68870667081847 21.70883026293916 11 24.333369619426392 14.219929166170896 37.54091678923771 23.905784425164995 12 21.377740760337105 15.50850740109719 40.59434932706175 22.51940251150396 13 18.081950875380898 19.12083015830019 41.485215104803515 21.31200386151539 14 16.97379047059687 18.196673999832917 41.81731724256072 23.012218287009496 15 20.600163540577558 15.074213498932936 41.50348473072765 22.822138229761855 16 21.178968918007776 18.359286328497156 36.191917990054236 24.269826763440832 17 20.66940246931083 19.86701568825014 36.605832609721126 22.857749232717907 18 22.3813043922206 23.804478716518695 33.595352679727974 20.218864211532733 19 23.875658529299333 20.43869042646286 31.74712474905635 23.938526295181457 20 22.63252229696032 24.000043880856722 34.03732573181877 19.330108090364188 21 21.433477887001732 18.792019084797225 34.03935100212907 25.73515202607198 22 21.596427760717688 21.06302219274329 32.060155591391585 25.280394455147437 23 21.77368110600012 19.377026852552724 35.79800291470152 23.051289126745637 24 25.245922666740928 17.998661633869943 32.654994358778325 24.100421340610804 25 19.810392505824762 19.787734794228317 33.7961497923676 26.60572290757932 26 18.667211801925188 19.1291422051987 35.35873022302445 26.844915769851657 27 22.29919655839065 19.827733882856677 35.547797645116944 22.32527191363572 28 22.911798634123947 21.089814831223254 31.75273643554113 24.245650099111664 29 22.860407400000167 18.79653374986393 35.42185114769537 22.921207702440537 30 25.975990420471433 19.38048668933282 32.41719386984432 22.226329020351436 31 27.642830078977106 18.922100509102325 30.71638874050971 22.718680671410862 32 26.98896312067151 18.57966105413632 30.967648838380896 23.46372698681127 33 22.091564158453775 20.25810382379473 36.25520768725101 21.395124330500487 34 24.64808818702021 21.53727299040444 32.426898290081155 21.387740532494195 35 26.384462126179404 21.73718404728331 31.117054716896746 20.76129910964054 36 24.519821067368085 24.42138449166137 30.05353464520218 21.005259795768367 37 23.64595912160651 25.87856647991987 29.70050471423858 20.774969684235042 38 22.074686905867967 23.35090255327516 27.927760295756975 26.646650245099902 39 23.372083505270343 21.1386322843277 32.78490701055757 22.70437719984439 40 19.366098831503418 20.865811496278145 35.037134175001924 24.73095549721652 41 21.472548726737873 24.220587379021744 29.26237123711105 25.04449265712933 42 21.247828108557865 18.642233468098198 32.101125122043634 28.008813301300307 43 23.67912292293762 19.249814561187215 33.32734190866537 23.74372060720979 44 23.21655962269214 20.424471341159315 32.8065098938674 23.552459142281144 45 22.921967178806895 20.607294179795062 32.126947318499916 24.343791322898127 46 23.64005208320148 20.99428958158759 31.09916482915579 24.266493506055138 47 20.73699586591698 22.15320832352343 33.573074706314706 23.536721104244883 48 22.388392838306636 20.496410630306315 31.088827511946988 26.026369019440065 49 22.131394474556277 18.61611591972166 34.62866246929395 24.623827136428115 50 21.15664875146305 18.81691303236129 35.374130716009 24.65230750016666 51 20.301351783545858 17.0078825208202 34.50406615207924 28.186699543554706 52 18.35072112280986 18.85767159735601 37.48311219913133 25.3084950807028 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 664.0 1 4331.0 2 7998.0 3 62975.0 4 117952.0 5 67205.5 6 16459.0 7 15173.5 8 13888.0 9 13661.5 10 13435.0 11 13094.5 12 12754.0 13 12231.5 14 10936.5 15 10164.0 16 9635.0 17 9106.0 18 8542.5 19 7979.0 20 7653.5 21 7328.0 22 7139.0 23 6950.0 24 7134.0 25 7318.0 26 8209.0 27 9100.0 28 9159.0 29 9218.0 30 10130.0 31 11042.0 32 13769.0 33 16496.0 34 18552.0 35 20608.0 36 23783.0 37 26958.0 38 29213.5 39 36741.0 40 42013.0 41 54874.0 42 67735.0 43 92849.5 44 117964.0 45 150048.5 46 182133.0 47 201958.0 48 221783.0 49 212914.0 50 204045.0 51 185565.0 52 167085.0 53 149762.5 54 132440.0 55 126410.5 56 120381.0 57 119294.0 58 118207.0 59 117018.5 60 115830.0 61 114316.5 62 112803.0 63 115527.0 64 104182.0 65 90113.0 66 75122.5 67 60132.0 68 50119.0 69 40106.0 70 34762.5 71 29419.0 72 28137.5 73 26856.0 74 21499.0 75 16142.0 76 12300.0 77 8458.0 78 6418.0 79 4378.0 80 3503.0 81 2628.0 82 2082.0 83 1536.0 84 1056.0 85 576.0 86 431.0 87 286.0 88 183.5 89 64.5 90 48.0 91 35.0 92 22.0 93 15.0 94 8.0 95 4.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2370054.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.621928544078845 #Duplication Level Percentage of deduplicated Percentage of total 1 72.83664710551342 19.390520146332655 2 11.13675514833387 5.929637995436929 3 4.268855564404791 3.409355034017331 4 2.109652453039696 2.2465206743065376 5 1.2391674533167085 1.6494513698172786 6 0.8156219292577785 1.3028057231810588 7 0.5716609864832584 1.0653102553516447 8 0.44062950294385383 0.9384325713427405 9 0.3503974673773615 0.8395430704691684 >10 5.367005707558362 34.61524801699176 >50 0.7028598999209028 12.173918390081786 >100 0.14797686297508328 6.715852098738089 >500 0.0067042074093442835 1.225725303361467 >1k 0.005107967549976596 2.5012122323725063 >5k 4.7887195781030597E-4 0.9079053219497205 >10k+ 4.7887195781030597E-4 5.08856179624944 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 90704 3.827085796357382 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 16815 0.7094775055758223 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA 12226 0.5158532252851623 No Hit CCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGCT 8801 0.3713417500191979 No Hit CTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGCTT 7402 0.31231355910034114 Illumina Single End Adapter 2 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGCT 5162 0.2178009446198272 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 4497 0.18974251219592464 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 4342 0.1832025768189248 No Hit CGCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC 3709 0.1564943246018867 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCG 2838 0.119744107096294 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 2679 0.1130353991934361 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 2508 0.10582037371300401 No Hit TCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGCT 2402 0.1013479017777654 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.219313146451516E-5 0.0 0.0 0.3204568334729926 0.0 2 4.219313146451516E-5 0.0 0.0 1.0856714657134394 0.0 3 4.219313146451516E-5 0.0 0.0 1.7366270979479792 0.0 4 4.219313146451516E-5 0.0 0.0 2.1545078719725375 0.0 5 4.219313146451516E-5 0.0 0.0 4.457282407911381 0.0 6 4.219313146451516E-5 0.0 0.0 5.0716565951661865 0.0 7 4.219313146451516E-5 0.0 0.0 7.030219564617515 0.0 8 4.219313146451516E-5 0.0 0.0 9.265147545161419 0.0 9 4.219313146451516E-5 0.0 0.0 11.167045139055903 0.0 10 4.219313146451516E-5 0.0 0.0 12.387650239192862 0.0 11 4.219313146451516E-5 0.0 0.0 13.491971069013617 0.0 12 4.219313146451516E-5 0.0 0.0 14.318365741877612 0.0 13 4.219313146451516E-5 0.0 0.0 14.70831466287266 0.0 14 4.219313146451516E-5 0.0 0.0 14.984890639622558 0.0 15 4.219313146451516E-5 0.0 0.0 15.77689791034297 0.0 16 4.219313146451516E-5 0.0 0.0 16.627975565113708 0.0 17 4.219313146451516E-5 0.0 0.0 17.69554617742887 0.0 18 8.438626292903032E-5 0.0 0.0 18.31439283661891 0.0 19 8.438626292903032E-5 0.0 0.0 18.975770172325188 0.0 20 1.2657939439354547E-4 0.0 0.0 19.73980339688463 0.0 21 1.2657939439354547E-4 0.0 0.0 20.4594494471434 0.0 22 2.1096565732257576E-4 0.0 0.0 21.17880014548192 0.0 23 2.1096565732257576E-4 0.0 0.0 21.836295713093456 0.0 24 5.907038405032122E-4 0.0 0.0 22.354891491923812 0.0 25 5.907038405032122E-4 0.0 0.0 22.864415747489296 0.0 26 5.907038405032122E-4 0.0 0.0 23.336303729788437 0.0 27 5.907038405032122E-4 0.0 0.0 23.859498559948424 0.0 28 5.907038405032122E-4 0.0 0.0 24.372356072899606 0.0 29 5.907038405032122E-4 0.0 0.0 24.90171110025341 0.0 30 5.907038405032122E-4 0.0 0.0 25.41566563462267 0.0 31 5.907038405032122E-4 0.0 0.0 25.894895221796634 0.0 32 6.328969719677273E-4 0.0 0.0 26.4518867502597 0.0 33 6.328969719677273E-4 0.0 0.0 26.969427700803443 0.0 34 6.328969719677273E-4 0.0 0.0 27.537136284658494 0.0 35 6.328969719677273E-4 0.0 0.0 28.021597820134055 0.0 36 6.750901034322425E-4 0.0 0.0 28.54842125959999 0.0 37 6.750901034322425E-4 0.0 0.0 29.118661431342915 0.0 38 6.750901034322425E-4 0.0 0.0 29.754680695039017 0.0 39 6.750901034322425E-4 0.0 0.0 30.46614127779367 0.0 40 6.750901034322425E-4 0.0 0.0 31.138446634549254 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 22220 0.0 45.22367 1 ATTACGG 195 0.0 43.641026 1 CACTTAC 4300 0.0 42.46977 36 TACACGG 130 0.0 42.46154 1 AGGGTAC 950 0.0 42.368423 5 CGGGTAC 745 0.0 41.986576 5 ACTTACT 4330 0.0 41.856815 37 ACCCGCA 4560 0.0 41.561405 31 CCCGCAC 4575 0.0 41.374863 32 CGACGGT 580 0.0 41.241383 27 CGCACTT 4465 0.0 41.209404 34 GCACTTA 4450 0.0 41.141575 35 CCGCACT 4480 0.0 41.12277 33 GGGTACC 2610 0.0 40.977013 6 CATATGC 2080 0.0 40.913464 32 CTTACTG 4425 0.0 40.906216 38 GCGCGAC 2605 0.0 40.879078 8 AATGCGG 350 0.0 40.74286 1 CCAGTAG 2230 0.0 40.636772 25 ACGTAGG 170 0.0 40.588238 1 >>END_MODULE