##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043259_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2341937 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.42127392837638 33.0 31.0 34.0 31.0 34.0 2 32.70514450217918 34.0 31.0 34.0 31.0 34.0 3 32.81580076663036 34.0 31.0 34.0 31.0 34.0 4 36.265399538928676 37.0 37.0 37.0 35.0 37.0 5 36.260814018481284 37.0 37.0 37.0 35.0 37.0 6 36.382085000578584 37.0 37.0 37.0 35.0 37.0 7 36.34017354010804 37.0 37.0 37.0 35.0 37.0 8 36.25394876121774 37.0 37.0 37.0 35.0 37.0 9 37.87616703609021 39.0 38.0 39.0 35.0 39.0 10 37.66446748994529 39.0 37.0 39.0 35.0 39.0 11 37.381233568622896 39.0 37.0 39.0 35.0 39.0 12 37.39263353369454 39.0 37.0 39.0 35.0 39.0 13 37.41972307538589 39.0 37.0 39.0 35.0 39.0 14 38.73123060099396 40.0 38.0 41.0 35.0 41.0 15 38.79583011840199 41.0 38.0 41.0 35.0 41.0 16 38.726251816338355 40.0 38.0 41.0 35.0 41.0 17 38.66469465233266 40.0 38.0 41.0 34.0 41.0 18 38.49223356563392 40.0 38.0 41.0 34.0 41.0 19 38.333545693159124 40.0 37.0 41.0 35.0 41.0 20 38.074406783786245 40.0 35.0 41.0 34.0 41.0 21 38.02082037219618 40.0 35.0 41.0 34.0 41.0 22 37.98757268022154 40.0 35.0 41.0 34.0 41.0 23 37.97367990684634 40.0 35.0 41.0 34.0 41.0 24 37.89991746148594 40.0 35.0 41.0 34.0 41.0 25 37.88133839637872 40.0 35.0 41.0 34.0 41.0 26 37.84446379215154 40.0 35.0 41.0 34.0 41.0 27 37.834191526074356 40.0 35.0 41.0 34.0 41.0 28 37.74387398123861 40.0 35.0 41.0 34.0 41.0 29 37.68816966468355 40.0 35.0 41.0 34.0 41.0 30 37.58151564282045 40.0 35.0 41.0 34.0 41.0 31 37.46407738551464 40.0 35.0 41.0 34.0 41.0 32 37.266424758650636 40.0 35.0 41.0 33.0 41.0 33 36.88944536082738 39.0 35.0 41.0 33.0 41.0 34 36.66284746344586 39.0 35.0 41.0 32.0 41.0 35 36.465009946894384 39.0 35.0 41.0 31.0 41.0 36 36.39687190560634 39.0 35.0 41.0 32.0 41.0 37 36.29758187346628 39.0 35.0 41.0 31.0 41.0 38 36.201889717784894 38.0 35.0 41.0 31.0 41.0 39 36.12995524644771 38.0 35.0 41.0 31.0 41.0 40 36.04579670588919 38.0 35.0 41.0 31.0 41.0 41 35.96512246059565 38.0 35.0 41.0 31.0 41.0 42 35.88355109467078 38.0 35.0 41.0 31.0 41.0 43 35.76413370641482 38.0 35.0 40.0 30.0 41.0 44 35.64443962412311 37.0 35.0 40.0 30.0 41.0 45 35.56239642654777 37.0 35.0 40.0 30.0 41.0 46 35.481334468006615 37.0 35.0 40.0 30.0 41.0 47 35.33169380730566 37.0 35.0 40.0 30.0 41.0 48 35.26495119211149 36.0 35.0 40.0 29.0 41.0 49 35.206996174534154 36.0 35.0 40.0 29.0 41.0 50 35.13644431938177 36.0 35.0 40.0 29.0 41.0 51 34.75318806611792 35.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 4.0 13 5.0 14 17.0 15 37.0 16 69.0 17 175.0 18 330.0 19 631.0 20 1274.0 21 2137.0 22 3369.0 23 5251.0 24 8597.0 25 15326.0 26 24922.0 27 32184.0 28 34098.0 29 34215.0 30 35254.0 31 40128.0 32 48367.0 33 65583.0 34 160279.0 35 233518.0 36 209330.0 37 234505.0 38 361744.0 39 790435.0 40 151.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.023950259977106 17.948219785587742 23.835611290995445 28.19221866343971 2 34.046731402253776 20.40516034376672 24.55104471213359 20.997063541845918 3 27.38293130857064 20.928060831696154 32.056285032432555 19.63272282730065 4 24.291857552103238 23.95068697407317 29.599130975769206 22.158324498054387 5 22.77904999152411 31.948212099642305 26.61472106209518 18.658016846738406 6 80.12585308656894 2.105735551383321 15.07867205650707 2.68973930554067 7 80.09737238875341 2.0734972802428078 13.65805314148075 4.171077189523031 8 71.05195400217855 3.569523859950118 18.667368080353995 6.711154057517346 9 43.522391934539655 15.721046296292343 23.18175083275084 17.574810936417162 10 29.179649153670656 16.638790881223535 32.42849829009064 21.75306167501517 11 24.49843868558377 14.176427461541449 37.37017690911412 23.954956943760656 12 21.509929601009762 15.460748944143246 40.48789527643144 22.54142617841556 13 18.17721825992757 19.119984867227426 41.372462196890865 21.330334675954134 14 17.066001348456428 18.199678300483747 41.70282975161159 23.031490599448233 15 20.631127139628436 15.0913538664789 41.470244502734275 22.80727449115839 16 21.21299590894204 18.288920666952187 36.148495881827735 24.349587542278037 17 20.801413530765345 19.784135952418875 36.46263755173602 22.95181296507976 18 22.417212760206613 23.934034092291977 33.530363967946194 20.118389179555216 19 24.01183293999796 20.532661638635027 31.454347405587768 24.001158015779247 20 22.57643992985294 24.214400301972255 33.8086378924796 19.400521875695205 21 21.46774230049741 18.86775775778768 33.88327696261684 25.78122297909807 22 21.616081047440645 21.198648810792093 31.76810477822418 25.41716536354308 23 21.8519968726742 19.40726842780143 35.543782774686086 23.196951924838284 24 25.333046960699622 17.926442940181566 32.506681435068494 24.233828664050314 25 19.6474115230256 19.837553273209313 33.757782553501656 26.757252650263435 26 18.726122863253796 19.032236990149606 35.253894532602715 26.987745613993887 27 22.33001997918817 19.791437600584473 35.429048689183354 22.449493731044004 28 22.964067778082846 21.14655518060477 31.531292259356253 24.358084781956133 29 22.876704198276894 18.841753642390895 35.24582428989337 23.035717869438844 30 26.09468145385636 19.337240924926675 32.25133724775688 22.31674037346009 31 27.792549500691095 18.948203986699898 30.478915530178654 22.780330982430357 32 27.074425998649836 18.501437058298322 30.86662877780231 23.557508165249537 33 22.184072415269924 20.11352141411148 36.229625305889954 21.47278086472864 34 24.677222316398776 21.532645839747182 32.33323526636284 21.456896577491197 35 26.49968807871433 21.661513524915488 31.07427740370471 20.76452099266547 36 24.551386309708587 24.43259575300275 29.949353889536738 21.066664047751928 37 23.65473537503357 25.853513565907193 29.707033109771952 20.78471794928728 38 22.23578174818537 23.285425696762978 27.798356659466073 26.680435895585575 39 23.465917315452977 21.169826515401567 32.67278325591166 22.69147291323379 40 19.372638973635926 20.841978242796454 35.00410130588483 24.78128147768279 41 21.548530126984627 24.19164136353796 29.139169841033297 25.12065866844411 42 21.39408532338829 18.57560643176994 32.06533736817002 27.964970876671746 43 23.86225590184535 19.100001409089998 33.28223602940643 23.755506659658224 44 23.243494594431873 20.27782984768591 32.85365917187354 23.625016386008678 45 23.059757798779387 20.444999160950957 32.17772297034463 24.317520069925024 46 23.85832752973287 20.948300488014834 31.03589037621422 24.15748160603808 47 20.92157047777118 21.917242009498974 33.574985151180414 23.586202361549436 48 22.49240692640323 20.384109393207417 31.0051892941612 26.118294386228154 49 22.28138502444771 18.505151931926438 34.62889906944551 24.584563974180348 50 21.2830234118168 18.696062276653898 35.32503222759622 24.695882083933085 51 20.322237532435757 17.01373691948161 34.31099982621223 28.353025721870402 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 640.0 1 4173.0 2 7706.0 3 60380.0 4 113054.0 5 65116.5 6 17179.0 7 15500.0 8 13821.0 9 13426.0 10 13031.0 11 12703.5 12 12376.0 13 11809.0 14 11242.0 15 10450.0 16 9658.0 17 9078.5 18 8499.0 19 7881.5 20 7264.0 21 7136.5 22 7009.0 23 6857.0 24 6705.0 25 6821.5 26 7978.0 27 9018.0 28 8996.5 29 8975.0 30 10991.0 31 13007.0 32 14819.0 33 16631.0 34 19870.0 35 23109.0 36 25870.5 37 28632.0 38 31679.5 39 34727.0 40 43106.5 41 51486.0 42 65886.5 43 80287.0 44 106894.0 45 133501.0 46 169790.5 47 206080.0 48 227904.0 49 249728.0 50 221055.0 51 192382.0 52 166274.5 53 140167.0 54 131608.5 55 123050.0 56 121746.5 57 120443.0 58 119704.0 59 118965.0 60 116520.0 61 114075.0 62 111970.0 63 109865.0 64 109621.0 65 109377.0 66 91377.5 67 73378.0 68 60578.5 69 47779.0 70 40599.0 71 33419.0 72 30450.0 73 27481.0 74 23120.0 75 14890.5 76 11022.0 77 8290.0 78 5558.0 79 4304.5 80 3051.0 81 2348.5 82 1646.0 83 1205.5 84 765.0 85 509.5 86 254.0 87 185.0 88 116.0 89 84.0 90 52.0 91 34.0 92 16.0 93 12.5 94 9.0 95 6.5 96 4.0 97 2.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2341937.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.329744862418902 #Duplication Level Percentage of deduplicated Percentage of total 1 72.29178774460159 19.034243269635017 2 11.35534828140428 5.979668461465634 3 4.251770168403905 3.35844071243156 4 2.16626955625476 2.2814929887765296 5 1.2698001712095774 1.6716757267102005 6 0.789001394022331 1.2464523240420493 7 0.5893343365848274 1.0861915904658987 8 0.4701150528708327 0.9902407518457279 9 0.3852989744388833 0.9130341323454715 >10 5.580272673222092 35.34743669238337 >50 0.6886583780160943 11.791368324472739 >100 0.1497423710564671 6.810935097724517 >500 0.006382272969682022 1.1818636983953308 >1k 0.005236736795636531 2.5023849264649547 >5k 4.909440745909248E-4 0.9240675517075456 >10k+ 4.909440745909248E-4 4.880503751133557 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 87028 3.7160692196246097 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 16220 0.6925890833100976 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 10020 0.4278509626860159 No Hit CCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC 8692 0.37114576523621257 No Hit CTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGCT 7342 0.3135011744551625 No Hit GCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC 5412 0.23109075948669838 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 4359 0.18612797867747938 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 4169 0.1780150362712575 No Hit CGCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTG 3722 0.1589282717681987 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 2646 0.11298339793085808 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCC 2617 0.11174510672148738 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 2510 0.10717623915587823 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.32157141716450954 0.0 2 0.0 0.0 0.0 1.0957169215055742 0.0 3 0.0 0.0 0.0 1.7474850946033134 0.0 4 0.0 0.0 0.0 2.190964146345525 0.0 5 0.0 0.0 0.0 4.554904764731075 0.0 6 0.0 0.0 0.0 5.187842371507005 0.0 7 0.0 0.0 0.0 7.197290106437534 0.0 8 0.0 0.0 0.0 9.516054445529491 0.0 9 0.0 0.0 0.0 11.498003575672616 0.0 10 0.0 0.0 0.0 12.782068860093162 0.0 11 0.0 0.0 0.0 13.92603643906732 0.0 12 0.0 0.0 0.0 14.790150204723696 0.0 13 4.2699696874851884E-5 0.0 0.0 15.19720641503166 0.0 14 4.2699696874851884E-5 0.0 0.0 15.476846729865064 0.0 15 4.2699696874851884E-5 0.0 0.0 16.295485318349726 0.0 16 4.2699696874851884E-5 0.0 0.0 17.170530206406063 0.0 17 4.2699696874851884E-5 0.0 0.0 18.2771782503116 0.0 18 4.2699696874851884E-5 0.0 0.0 18.908749466787537 4.2699696874851884E-5 19 4.2699696874851884E-5 0.0 0.0 19.600740754341384 4.2699696874851884E-5 20 8.539939374970377E-5 0.0 0.0 20.40242756316673 4.2699696874851884E-5 21 8.539939374970377E-5 0.0 0.0 21.140064826679794 4.2699696874851884E-5 22 1.2809909062455567E-4 0.0 0.0 21.88350924896784 4.2699696874851884E-5 23 1.7079878749940754E-4 0.0 0.0 22.550563913546778 4.2699696874851884E-5 24 2.988978781239632E-4 0.0 0.0 23.08063795055119 4.2699696874851884E-5 25 2.988978781239632E-4 0.0 0.0 23.61212107755247 4.2699696874851884E-5 26 2.988978781239632E-4 0.0 0.0 24.08399542771646 4.2699696874851884E-5 27 2.988978781239632E-4 0.0 0.0 24.62252400470209 4.2699696874851884E-5 28 3.4159757499881507E-4 0.0 0.0 25.139275736281547 4.2699696874851884E-5 29 3.84297271873667E-4 0.0 0.0 25.671740956310952 4.2699696874851884E-5 30 3.84297271873667E-4 0.0 0.0 26.190627672734152 4.2699696874851884E-5 31 3.84297271873667E-4 0.0 0.0 26.67586702801997 4.2699696874851884E-5 32 3.84297271873667E-4 0.0 0.0 27.237410741621144 4.2699696874851884E-5 33 3.84297271873667E-4 0.0 0.0 27.746988924125628 4.2699696874851884E-5 34 3.84297271873667E-4 0.0 0.0 28.320915549820512 4.2699696874851884E-5 35 3.84297271873667E-4 0.0 0.0 28.81038217509694 4.2699696874851884E-5 36 3.84297271873667E-4 0.0 0.0 29.330806080607633 4.2699696874851884E-5 37 4.2699696874851887E-4 0.0 0.0 29.921300188689962 4.2699696874851884E-5 38 4.2699696874851887E-4 0.0 0.0 30.56683420604397 4.2699696874851884E-5 39 4.2699696874851887E-4 0.0 0.0 31.284274512935234 4.2699696874851884E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGATA 60 0.0 45.000004 43 CGTTTTT 21150 0.0 44.244682 1 CGGGTAC 615 0.0 42.439026 5 TACGGGA 345 0.0 41.73913 3 ATTACGG 130 0.0 41.53846 1 CACTTAC 4305 0.0 41.132404 36 CACGACG 570 0.0 41.05263 25 GCGCGAC 2270 0.0 40.837006 8 AGGGTAC 1080 0.0 40.833336 5 GCACTTA 4350 0.0 40.75862 35 TAGGGCG 530 0.0 40.75472 4 CGACGGT 580 0.0 40.732758 27 CGGTCTA 580 0.0 40.732758 30 CGCACTT 4345 0.0 40.701954 34 CATATGC 1955 0.0 40.6266 32 ACCCGCA 4405 0.0 40.607265 31 ACTTACT 4350 0.0 40.551723 37 TACGCGG 245 0.0 40.408165 1 ACTACGG 145 0.0 40.344826 1 CCCGCAC 4475 0.0 40.122906 32 >>END_MODULE