##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043257_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2142707 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.388808175826185 33.0 31.0 34.0 31.0 34.0 2 32.68744956729968 34.0 31.0 34.0 31.0 34.0 3 32.817349735638146 34.0 31.0 34.0 31.0 34.0 4 36.25939244143039 37.0 37.0 37.0 35.0 37.0 5 36.25589919667038 37.0 37.0 37.0 35.0 37.0 6 36.35887267834566 37.0 37.0 37.0 35.0 37.0 7 36.32164173636433 37.0 37.0 37.0 35.0 37.0 8 36.236378562257926 37.0 37.0 37.0 35.0 37.0 9 37.84463344731687 39.0 38.0 39.0 35.0 39.0 10 37.599994772967094 39.0 37.0 39.0 35.0 39.0 11 37.304663213402485 39.0 37.0 39.0 35.0 39.0 12 37.31074103925548 39.0 37.0 39.0 35.0 39.0 13 37.32779050052107 39.0 37.0 39.0 35.0 39.0 14 38.633200432910336 40.0 38.0 41.0 35.0 41.0 15 38.703899319879014 40.0 38.0 41.0 35.0 41.0 16 38.620378801208005 40.0 38.0 41.0 34.0 41.0 17 38.53846839535223 40.0 37.0 41.0 34.0 41.0 18 38.402285520138776 40.0 37.0 41.0 34.0 41.0 19 38.23996841378686 40.0 37.0 41.0 34.0 41.0 20 37.98308914844633 40.0 35.0 41.0 34.0 41.0 21 37.936570422367595 40.0 35.0 41.0 34.0 41.0 22 37.916967182167234 40.0 35.0 41.0 34.0 41.0 23 37.88133328541886 40.0 35.0 41.0 34.0 41.0 24 37.79525898781308 40.0 35.0 41.0 34.0 41.0 25 37.749222828879546 40.0 35.0 41.0 34.0 41.0 26 37.69509503632555 40.0 35.0 41.0 34.0 41.0 27 37.67649566646303 40.0 35.0 41.0 34.0 41.0 28 37.5727287958643 39.0 35.0 41.0 34.0 41.0 29 37.53810343644745 39.0 35.0 41.0 34.0 41.0 30 37.4071480608408 39.0 35.0 41.0 34.0 41.0 31 37.3011358995887 39.0 35.0 41.0 33.0 41.0 32 37.08538031564745 39.0 35.0 41.0 33.0 41.0 33 36.722815111912176 39.0 35.0 41.0 32.0 41.0 34 36.4888209167189 39.0 35.0 41.0 31.0 41.0 35 36.343191579623344 39.0 35.0 41.0 31.0 41.0 36 36.286625282878155 39.0 35.0 41.0 31.0 41.0 37 36.168503206458 38.0 35.0 41.0 31.0 41.0 38 36.07270709434374 38.0 35.0 41.0 31.0 41.0 39 35.986904415769395 38.0 35.0 41.0 31.0 41.0 40 35.86906422576675 38.0 35.0 40.0 31.0 41.0 41 35.77568374957472 37.0 35.0 40.0 31.0 41.0 42 35.65698436603791 37.0 35.0 40.0 30.0 41.0 43 35.52730354640182 37.0 35.0 40.0 30.0 41.0 44 35.3807800133196 37.0 35.0 40.0 30.0 41.0 45 35.28033277531646 36.0 35.0 40.0 29.0 41.0 46 35.162674131367474 36.0 35.0 40.0 29.0 41.0 47 35.01633307773765 36.0 35.0 40.0 29.0 41.0 48 34.92160757397068 36.0 35.0 40.0 28.0 41.0 49 34.848500518269645 35.0 35.0 40.0 28.0 41.0 50 34.76635629603114 35.0 35.0 40.0 28.0 41.0 51 34.3719439942092 35.0 34.0 39.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 1.0 12 3.0 13 5.0 14 10.0 15 33.0 16 95.0 17 182.0 18 377.0 19 731.0 20 1310.0 21 2216.0 22 3529.0 23 5329.0 24 8629.0 25 14440.0 26 22452.0 27 29896.0 28 32738.0 29 32878.0 30 35246.0 31 39527.0 32 47023.0 33 63852.0 34 153928.0 35 224326.0 36 190670.0 37 226906.0 38 346750.0 39 659498.0 40 124.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.786337096019196 18.063925679059246 23.738476609261088 27.41126061566047 2 32.71431884994075 20.76322147638478 25.080890667739453 21.441569005935015 3 27.343962566977194 21.44609598979235 31.327568351622503 19.882373091607953 4 24.07408012388068 24.031610481507737 29.40882724516231 22.485482149449272 5 22.944154287077048 32.71469220943414 26.00448871450926 18.336664788979547 6 82.28707891466263 2.057957527557431 13.291784644377417 2.3631789134025323 7 82.6904938472689 1.989492730457314 12.080606447825112 3.239406974448676 8 74.63414269893177 3.4516618464400404 16.19507473490309 5.719120719725095 9 45.98160177756455 15.755490601374802 21.34169534145359 16.921212279607058 10 29.505900713443324 15.938390083198495 30.756655016294808 23.799054187063373 11 25.690120021076147 13.466470217346563 37.912929765945606 22.930479995631696 12 22.236358027485792 15.494418975622892 39.184032161186764 23.085190835704555 13 18.784882860792447 18.996531023607055 40.916886909876155 21.301699205724347 14 17.739476279304636 17.647489834121043 41.379992691487914 23.2330411950864 15 22.145444990845693 14.486021653917216 40.09236913866431 23.276164216572777 16 22.297962343894895 17.456889812746212 35.35425048781751 24.890897355541377 17 22.766388498287444 19.257089280055556 35.50914800763707 22.467374214019927 18 23.804654579464202 23.66567150805033 31.675166039967202 20.85450787251827 19 25.530322157905864 20.244438460321454 30.39244283049432 23.83279655127836 20 24.82145248977112 23.043047882888327 32.52488557698276 19.610614050357793 21 22.5007898886782 18.576128234051602 33.18157825591646 25.741503621353733 22 23.605047260311373 20.343145376386037 31.219620788096552 24.832186575206038 23 24.04029108972902 18.985983617918826 34.11679711691799 22.856928175434156 24 26.687689917473552 17.168096244610208 30.63167292588301 25.512540912033238 25 21.279437645931058 19.189977911118973 32.551394101013344 26.979190341936626 26 20.178680519548404 18.903611179689992 33.82683680036514 27.090871500396464 27 23.22487395616853 19.830802811583663 33.16365700023381 23.78066623201399 28 24.546519892827156 20.87088902029069 30.558214445558818 24.024376641323336 29 25.5080139281759 18.171033183725076 33.33218214156205 22.988770746536975 30 28.090681553754198 19.26983017276744 30.25719335401434 22.382294919464023 31 30.416197828261165 19.08450385423672 27.71811544928915 22.781182868212966 32 30.324491402697618 18.750580457337378 27.549683647834257 23.375244492130747 33 24.924079680516282 20.043617722815114 31.280898414948943 23.751404181719664 34 25.913715687679183 22.07824028203576 29.780599960703913 22.227444069581143 35 27.778179657788023 23.759244731080827 27.355070011905504 21.10750559922565 36 26.990717816294996 22.93314018202209 25.45014320670068 24.625998794982234 37 25.39208580547877 27.076497159901002 26.14683202136363 21.384585013256597 38 23.60803413625848 23.37855805763457 25.71457506789309 27.298832738213857 39 24.088174444756095 20.854881232011657 30.56330146865624 24.493642854576013 40 21.231834310524025 20.780629362764017 32.40326372201145 25.5842726047005 41 22.433398500121577 24.19406853106841 27.126807351635108 26.24572561717491 42 21.938510491635114 18.995084255570173 29.755258185090167 29.311147067704546 43 23.86957246137713 18.849194033528615 31.311233873786758 25.9699996313075 44 25.169983576849287 20.12953707623114 30.389969323850625 24.31051002306895 45 25.197285489803317 21.036427285671817 29.971293321952093 23.794993902572774 46 24.313170209459344 21.4599569609844 29.401733414787927 24.825139414768326 47 22.27000705182743 22.686442896765634 31.227041308027648 23.816508743379288 48 23.931363457532925 20.76429488492827 29.507814180846935 25.796527476691868 49 22.83597337386773 19.175323551003473 32.70932516671668 25.279377908412116 50 22.09942843328556 19.742783311017327 33.54784391893059 24.609944336766528 51 21.69405336333899 18.093561088846958 32.17490772186771 28.03747782594634 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 489.0 1 3961.5 2 7434.0 3 53624.5 4 99815.0 5 57479.5 6 15144.0 7 13420.5 8 11697.0 9 11268.0 10 10839.0 11 10508.0 12 10177.0 13 9685.5 14 9194.0 15 8603.5 16 8013.0 17 7408.5 18 6804.0 19 6490.0 20 6176.0 21 5912.5 22 5649.0 23 5775.5 24 5902.0 25 6206.0 26 7637.5 27 8765.0 28 9776.5 29 10788.0 30 11988.0 31 13188.0 32 15088.0 33 16988.0 34 20831.5 35 24675.0 36 26840.0 37 29005.0 38 31586.0 39 34167.0 40 38352.5 41 42538.0 42 47910.5 43 53283.0 44 60324.0 45 67365.0 46 74639.0 47 81913.0 48 104275.0 49 126637.0 50 151620.5 51 176604.0 52 177933.0 53 179262.0 54 171461.5 55 163661.0 56 155344.5 57 147028.0 58 141124.0 59 135220.0 60 134265.5 61 133311.0 62 132631.0 63 131951.0 64 125692.5 65 119434.0 66 99659.5 67 79885.0 68 65904.5 69 51924.0 70 43946.5 71 35969.0 72 33635.0 73 31301.0 74 26164.5 75 16177.5 76 11327.0 77 8977.5 78 6628.0 79 4566.5 80 2505.0 81 2052.5 82 1600.0 83 1078.0 84 556.0 85 349.0 86 142.0 87 131.5 88 121.0 89 85.5 90 50.0 91 39.0 92 28.0 93 19.0 94 10.0 95 8.0 96 6.0 97 3.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2142707.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.44621991443957 #Duplication Level Percentage of deduplicated Percentage of total 1 74.81170540247746 19.036751078457083 2 9.591209081674558 4.881200310753217 3 3.4047137013779283 2.5991128077290493 4 1.6580909763251688 1.6876859048687225 5 1.0223644117885506 1.3007654827534056 6 0.7131542609296293 1.0888248093920982 7 0.5631781473137192 1.0031528491286081 8 0.476995938982859 0.9710194849321945 9 0.4209424940097403 0.9640255746514063 >10 6.316492713550802 38.67091565271533 >50 0.8973503781825487 14.720845809228948 >100 0.11283506651492546 4.8072352113144685 >500 0.005762546322637119 0.9446133449127724 >1k 0.0046472147763202565 2.4292219800370725 >5k 0.0 0.0 >10k+ 5.576657731584309E-4 4.894629699125636 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 75111 3.505425613487985 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 17815 0.8314249218395235 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 10551 0.4924145018427624 No Hit CCTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGCCGTCTTCTGC 4929 0.23003611786399167 RNA PCR Primer, Index 34 (96% over 25bp) GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 4617 0.21547509762184003 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 4197 0.19587372421894358 No Hit CTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGCCGTCTTCTGCT 3670 0.17127866759197594 RNA PCR Primer, Index 34 (96% over 26bp) GCTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGCCGTCTTCTGC 3388 0.1581177454500312 TruSeq Adapter, Index 18 (95% over 23bp) AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 3262 0.15223733342916226 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 2630 0.1227419334514705 No Hit CGCTGTCTCTTATACACATCTGACGCGTGGCAACTCGTATGCCGTCTTCTG 2373 0.11074775972636482 RNA PCR Primer, Index 34 (95% over 24bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.17813914828298968 0.0 2 0.0 0.0 0.0 0.6774141308167659 0.0 3 0.0 0.0 0.0 1.1126579602344138 0.0 4 0.0 0.0 0.0 1.397951283119904 0.0 5 0.0 0.0 0.0 2.9525735436529588 0.0 6 0.0 0.0 0.0 3.3976647297087283 0.0 7 0.0 0.0 0.0 4.76257369766375 0.0 8 0.0 0.0 0.0 6.40857569420364 0.0 9 0.0 0.0 0.0 7.768490978934591 0.0 10 0.0 0.0 0.0 8.760227133247803 0.0 11 0.0 0.0 0.0 9.558796419669138 0.0 12 0.0 0.0 0.0 10.109408332543834 0.0 13 0.0 0.0 0.0 10.401375456373643 0.0 14 0.0 0.0 0.0 10.59794922964269 0.0 15 0.0 0.0 0.0 11.142167361193108 0.0 16 0.0 0.0 0.0 11.74028926960149 0.0 17 0.0 0.0 0.0 12.504369472821063 0.0 18 0.0 0.0 0.0 12.946100423436336 0.0 19 0.0 0.0 0.0 13.39375845600915 0.0 20 0.0 0.0 0.0 13.938629966672998 0.0 21 4.666993667356293E-5 0.0 0.0 14.48644168334728 0.0 22 4.666993667356293E-5 0.0 0.0 15.008491594977755 0.0 23 4.666993667356293E-5 0.0 0.0 15.493718926572788 0.0 24 9.333987334712586E-5 0.0 0.0 15.878699234193009 0.0 25 9.333987334712586E-5 0.0 0.0 16.258079149412403 0.0 26 9.333987334712586E-5 0.0 0.0 16.612163958954724 0.0 27 9.333987334712586E-5 0.0 0.0 16.995557488728043 0.0 28 9.333987334712586E-5 0.0 0.0 17.37904435837471 0.0 29 9.333987334712586E-5 0.0 0.0 17.765378094158464 0.0 30 9.333987334712586E-5 0.0 0.0 18.13547069197982 0.0 31 9.333987334712586E-5 0.0 0.0 18.51368385878237 0.0 32 9.333987334712586E-5 0.0 0.0 18.93021304359392 0.0 33 9.333987334712586E-5 0.0 0.0 19.31267317463377 0.0 34 9.333987334712586E-5 0.0 0.0 19.77535892681547 0.0 35 9.333987334712586E-5 0.0 0.0 20.149371799317404 0.0 36 9.333987334712586E-5 0.0 0.0 20.557547065464387 0.0 37 9.333987334712586E-5 0.0 0.0 21.045434583449815 0.0 38 9.333987334712586E-5 0.0 0.0 21.57154477957089 0.0 39 9.333987334712586E-5 0.0 0.0 22.195381823086404 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGTT 20 7.0346525E-4 45.000004 35 TATAACG 20 7.0346525E-4 45.000004 29 TATCGCT 20 7.0346525E-4 45.000004 20 GCGTATC 20 7.0346525E-4 45.000004 33 ATCGAAT 35 1.2125929E-7 45.0 13 CGTTTTT 18725 0.0 44.050735 1 CCGGTAT 190 0.0 43.81579 42 ACGGGTA 155 0.0 43.548386 4 ACATACG 185 0.0 42.567566 16 ACGGGAT 360 0.0 42.5 4 CACGACG 360 0.0 41.875 25 ACGTAGG 125 0.0 41.399998 1 GCACTTA 4415 0.0 41.381653 35 CACTTAC 4410 0.0 41.32653 36 CGATAAG 60 3.6379788E-12 41.249996 9 TAGTAGG 585 0.0 41.153847 1 ACCCGCA 4510 0.0 40.958984 31 CGCACTT 4475 0.0 40.877094 34 ACTTACT 4440 0.0 40.79392 37 CCGCACT 4490 0.0 40.64031 33 >>END_MODULE