##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043256_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1153419 Sequences flagged as poor quality 0 Sequence length 52 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.28308879947357 33.0 31.0 34.0 31.0 34.0 2 32.61786393322808 34.0 31.0 34.0 31.0 34.0 3 32.681628272119674 34.0 31.0 34.0 31.0 34.0 4 36.20474259570893 37.0 37.0 37.0 35.0 37.0 5 36.10874799183991 37.0 35.0 37.0 35.0 37.0 6 36.33210221090514 37.0 37.0 37.0 35.0 37.0 7 36.25923970387171 37.0 37.0 37.0 35.0 37.0 8 36.239317195225674 37.0 37.0 37.0 35.0 37.0 9 37.80875813559513 39.0 38.0 39.0 35.0 39.0 10 37.64095268068239 39.0 37.0 39.0 35.0 39.0 11 37.309609083949546 39.0 37.0 39.0 35.0 39.0 12 37.33825088714509 39.0 37.0 39.0 34.0 39.0 13 37.33153693497333 39.0 37.0 39.0 34.0 39.0 14 38.74843140263859 40.0 38.0 41.0 35.0 41.0 15 38.84947447545081 41.0 38.0 41.0 35.0 41.0 16 38.88309885653002 41.0 38.0 41.0 35.0 41.0 17 38.83832328061182 41.0 38.0 41.0 35.0 41.0 18 38.55723895652837 40.0 38.0 41.0 35.0 41.0 19 38.258047595886666 40.0 37.0 41.0 35.0 41.0 20 37.94367007999695 40.0 35.0 41.0 34.0 41.0 21 37.8783729069835 40.0 35.0 41.0 34.0 41.0 22 37.82261173086277 40.0 35.0 41.0 34.0 41.0 23 37.82326197158188 40.0 35.0 41.0 34.0 41.0 24 37.7211351642378 40.0 35.0 41.0 34.0 41.0 25 37.6274068660218 39.0 35.0 41.0 34.0 41.0 26 37.59578002443171 39.0 35.0 41.0 34.0 41.0 27 37.600733991723736 39.0 35.0 41.0 34.0 41.0 28 37.58144525103193 39.0 35.0 41.0 34.0 41.0 29 37.491868956554384 39.0 35.0 41.0 34.0 41.0 30 37.4357046311878 40.0 35.0 41.0 33.0 41.0 31 37.193926925081 39.0 35.0 41.0 33.0 41.0 32 36.937940158780115 39.0 35.0 41.0 33.0 41.0 33 36.73408102346155 39.0 35.0 41.0 32.0 41.0 34 36.23065425487182 39.0 35.0 41.0 30.0 41.0 35 36.14259085380074 39.0 35.0 41.0 30.0 41.0 36 35.935812571147174 39.0 35.0 41.0 30.0 41.0 37 35.77991779223335 38.0 35.0 41.0 30.0 41.0 38 35.74387624965429 38.0 35.0 41.0 30.0 41.0 39 35.81415426657615 38.0 35.0 41.0 30.0 41.0 40 35.86031182076938 39.0 35.0 41.0 30.0 41.0 41 35.91857252221439 39.0 35.0 41.0 30.0 41.0 42 35.91627847295736 39.0 35.0 41.0 30.0 41.0 43 35.85228438234501 39.0 35.0 41.0 30.0 41.0 44 35.65963192907348 38.0 35.0 41.0 28.0 41.0 45 35.55194079514903 38.0 35.0 41.0 27.0 41.0 46 35.49274114610562 38.0 35.0 41.0 27.0 41.0 47 35.42928372083345 38.0 35.0 41.0 27.0 41.0 48 35.38576614395983 38.0 35.0 40.0 27.0 41.0 49 35.3269366986325 38.0 35.0 40.0 27.0 41.0 50 35.186108430674366 38.0 35.0 40.0 26.0 41.0 51 35.10203924159391 38.0 35.0 40.0 26.0 41.0 52 34.77538171297681 37.0 35.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 3.0 14 7.0 15 13.0 16 36.0 17 70.0 18 182.0 19 340.0 20 754.0 21 1236.0 22 1965.0 23 3635.0 24 6838.0 25 12717.0 26 17716.0 27 18821.0 28 17003.0 29 16233.0 30 17981.0 31 21001.0 32 25728.0 33 34062.0 34 63497.0 35 108833.0 36 121725.0 37 88629.0 38 153437.0 39 420594.0 40 360.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.98257875065349 19.321339426522364 25.00886494847059 29.68721687435355 2 34.010103873787415 19.81621596314956 26.660302977495604 19.51337718556743 3 20.576997604513192 20.841342131523756 39.99110470696252 18.590555557000535 4 22.055038108441078 23.839818834265778 36.87255021809074 17.232592839202407 5 19.914098866066883 28.570450113965524 32.92576245059254 18.58968856937505 6 71.3012357174626 1.6572468461157654 23.046958650759176 3.994558785662452 7 72.17351196746368 1.4414536261323943 19.437168973287243 6.947865433116673 8 60.34424610657532 3.222679702692603 27.31886677781448 9.114207412917596 9 34.01920724385501 17.578694299296266 30.578826948402966 17.82327150844576 10 26.04907670152824 18.99656586201545 42.848695920563124 12.105661515893184 11 23.250700742748297 16.00173050730047 41.39458427509864 19.35298447485259 12 19.0541338403477 19.43560839556137 43.41839348926973 18.091864274821205 13 13.47654234931105 22.315741287424604 43.16896114941751 21.038755213846834 14 11.8935963426994 22.287304093308677 44.52640367464035 21.29269588935157 15 12.928519471241588 18.610409573624157 48.089809514148804 20.371261440985453 16 14.087768625278411 24.463529732040136 39.59541155469088 21.853290087990572 17 15.255947751857738 22.14277725614022 41.785769091717754 20.815505900284283 18 17.018360196944908 27.51107793438464 39.67630150014869 15.794260368521758 19 16.320868652241728 23.45791078523936 37.15232712483495 23.06889343768396 20 14.342662987171185 29.058217352063735 36.23106607399393 20.368053586771158 21 14.9295269108624 23.84285329095498 37.43453159693051 23.793088201252104 22 12.973862924054485 26.23357166823158 33.78590087383683 27.006664533877107 23 12.512712206058682 23.128455487554824 43.49295442506149 20.865877881325 24 17.121531724377697 21.642872191285214 39.4708254329086 21.764770651428492 25 13.238120752302502 24.64707101235544 39.73204880446741 22.382759430874643 26 15.067204545789517 21.47207562906455 39.007854040899275 24.45286578424666 27 20.249362980842175 21.558427596562915 39.1510803966295 19.04112902596541 28 16.59006830995501 21.6257058363006 35.923805659521825 25.860420194222566 29 19.90360831579851 20.957605172101378 37.67364678403945 21.465139728060663 30 22.44015401168179 20.112639032303093 32.36308748165237 25.084119474362744 31 24.3631325650089 18.810163522536044 35.29671351000807 21.529990402446984 32 22.269184051936026 19.46933421419276 35.59582424080061 22.6656574930706 33 23.66607451411846 18.75250884544125 34.573559131590514 23.007857508849778 34 23.30618795077938 18.344677866412813 37.29139193996284 21.057742242844967 35 31.88901864803684 18.07469791983659 32.23642058956892 17.799862842557648 36 25.213734124372845 23.181168335184353 33.952622594217715 17.65247494622509 37 25.36606385017067 19.975481589951265 38.458530681391586 16.199923878486484 38 23.164001980199735 22.975258774131515 33.6192658522185 20.241473393450253 39 25.77831646608908 22.07619260650293 35.73939739158103 16.40609353582696 40 17.803677588109785 20.108910985513504 40.576234655402764 21.511176770973947 41 20.857814896407984 22.819807892881943 33.1179736071627 23.204403603547366 42 21.958542385724527 18.785974567784994 36.75585368370037 22.499629362790106 43 25.44886116840454 20.73149479937473 34.4687403276693 19.350903704551424 44 18.591682640913668 22.611990959053042 36.578121220475815 22.218205179557472 45 21.71535235677581 19.721801010734175 36.349843378685456 22.21300325380456 46 24.96248111050711 18.74999458132734 34.87180287475757 21.41572143340798 47 19.810927338634094 17.8026372029592 38.470581809385834 23.915853649020868 48 20.41833886904932 16.340289175052604 33.91828988424848 29.32308207164959 49 21.92906480645802 15.905061387058822 39.36019781189663 22.80567599458653 50 20.09833373648258 15.991933547132481 39.860276274276735 24.0494564421082 51 17.663832484118956 15.811426723506376 38.41136655456517 28.113374237809502 52 16.311245089598835 15.53381728582588 46.09166313369209 22.06327449088319 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 429.0 1 2041.5 2 3654.0 3 47302.0 4 90950.0 5 50063.5 6 9177.0 7 8769.5 8 8362.0 9 8788.0 10 9214.0 11 9518.0 12 9822.0 13 9481.5 14 8383.0 15 7625.0 16 6919.5 17 6214.0 18 5650.5 19 5087.0 20 4780.0 21 4473.0 22 4193.5 23 3914.0 24 3987.0 25 4060.0 26 4461.0 27 4862.0 28 4930.5 29 4999.0 30 5866.0 31 6733.0 32 8074.0 33 9415.0 34 11134.5 35 12854.0 36 14425.0 37 15996.0 38 18587.5 39 22555.0 40 23931.0 41 29981.0 42 36031.0 43 43072.5 44 50114.0 45 59323.0 46 68532.0 47 87164.5 48 105797.0 49 133956.0 50 162115.0 51 165654.5 52 169194.0 53 145195.5 54 121197.0 55 95269.5 56 69342.0 57 54198.5 58 39055.0 59 30521.0 60 21987.0 61 17804.0 62 13621.0 63 11279.0 64 7396.5 65 5856.0 66 4340.0 67 2824.0 68 2396.5 69 1969.0 70 1754.0 71 1539.0 72 1519.0 73 1499.0 74 1170.5 75 842.0 76 603.0 77 364.0 78 331.0 79 298.0 80 230.5 81 163.0 82 93.5 83 24.0 84 18.5 85 13.0 86 11.0 87 9.0 88 5.5 89 1.5 90 1.0 91 1.0 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1153419.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.579775116485514 #Duplication Level Percentage of deduplicated Percentage of total 1 73.86408299200859 23.32611130073054 2 11.769000519194893 7.43324779483952 3 4.658357239279381 4.413296220860854 4 2.361764178934778 2.9833592659572536 5 1.3431376142659075 2.120799190450511 6 0.8297123566210827 1.572127778007781 7 0.5860025833012865 1.2954080858833938 8 0.4545796621652308 1.1484418802964758 9 0.3607994704345103 1.0254569524622008 >10 3.168768656720749 21.876184217446024 >50 0.41124135250862676 8.758726821574896 >100 0.17714910460055722 10.3508114645939 >500 0.00990274497709602 2.1201116578955235 >1k 0.0044012199898204535 2.5670498894726963 >5k 8.252287480913349E-4 1.8730577549595708 >10k+ 2.7507624936377834E-4 7.135809724568869 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 82145 7.121869849551637 No Hit CCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGCT 8673 0.7519383675836795 Illumina Single End Adapter 1 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGCTT 7628 0.6613381607204321 Illumina Single End Adapter 1 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGCT 5261 0.45612218976798546 Illumina Single End Adapter 1 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC 4001 0.34688174895679713 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCG 2869 0.24873874975182478 No Hit TCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGCT 2681 0.2324393823926951 Illumina Single End Adapter 1 (95% over 21bp) CGTTCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCT 2553 0.22134194078647917 No Hit GCCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC 1907 0.16533454018010801 No Hit ACCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC 1853 0.16065280700248563 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTC 1692 0.14669430623216714 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTT 1613 0.13984510399083072 No Hit AGCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC 1564 0.1355968646259512 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCT 1485 0.12874766238461477 No Hit TCCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC 1410 0.12224525519347262 No Hit ACTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGCT 1377 0.11938419602937006 Illumina Single End Adapter 1 (95% over 21bp) CGTCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTG 1308 0.11340198141351929 No Hit ATCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC 1184 0.10265133485749757 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6823192612571841 0.0 2 0.0 0.0 0.0 2.2969103161990567 0.0 3 0.0 0.0 0.0 3.7875221406964856 0.0 4 0.0 0.0 0.0 4.698812833844422 0.0 5 0.0 0.0 0.0 9.656334775133754 0.0 6 0.0 0.0 0.0 11.050364178152085 0.0 7 0.0 0.0 0.0 15.131361630075453 0.0 8 0.0 0.0 0.0 20.130065483575354 0.0 9 0.0 0.0 0.0 23.873284556609523 0.0 10 0.0 0.0 0.0 26.216231915721867 0.0 11 0.0 0.0 0.0 28.20163357808394 0.0 12 0.0 0.0 0.0 29.57095383377593 0.0 13 0.0 0.0 0.0 30.162759586932417 0.0 14 0.0 0.0 0.0 30.57613928676396 0.0 15 0.0 0.0 0.0 31.910086447336138 0.0 16 0.0 0.0 0.0 33.43312360902673 0.0 17 0.0 0.0 0.0 35.09548568213286 0.0 18 8.669876254856214E-5 0.0 0.0 35.98596867226914 0.0 19 8.669876254856214E-5 0.0 0.0 36.970433121008064 0.0 20 8.669876254856214E-5 0.0 0.0 38.10696719925716 0.0 21 8.669876254856214E-5 0.0 0.0 39.20136567890766 0.0 22 1.7339752509712428E-4 0.0 0.0 40.24721285153097 0.0 23 1.7339752509712428E-4 0.0 0.0 41.06807673534075 0.0 24 2.6009628764568643E-4 0.0 0.0 41.77276427733547 0.0 25 2.6009628764568643E-4 0.0 0.0 42.43661670216981 0.0 26 2.6009628764568643E-4 0.0 0.0 43.12812603225714 0.0 27 3.4679505019424855E-4 0.0 0.0 43.779233738996844 0.0 28 3.4679505019424855E-4 0.0 0.0 44.431988722224965 0.0 29 3.4679505019424855E-4 0.0 0.0 45.1867014502102 0.0 30 3.4679505019424855E-4 0.0 0.0 45.851420862670025 0.0 31 3.4679505019424855E-4 0.0 0.0 46.45328367228215 0.0 32 3.4679505019424855E-4 0.0 0.0 47.036419549183776 0.0 33 3.4679505019424855E-4 0.0 0.0 47.60793779190389 0.0 34 3.4679505019424855E-4 0.0 0.0 48.26762867613591 0.0 35 4.3349381274281073E-4 0.0 0.0 48.80966933958952 0.0 36 4.3349381274281073E-4 0.0 0.0 49.352490291906065 0.0 37 4.3349381274281073E-4 0.0 0.0 49.88464729642914 0.0 38 4.3349381274281073E-4 0.0 0.0 50.440733159415615 0.0 39 4.3349381274281073E-4 0.0 0.0 50.98277382286923 0.0 40 4.3349381274281073E-4 0.0 0.0 51.55385857177661 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCCGTC 30 1.86141E-6 46.0 24 CACGGTG 20 6.311464E-4 46.0 3 TTTACGG 80 0.0 46.0 1 GCCGGTG 40 5.6115823E-9 46.0 46 CAATTGT 40 5.6115823E-9 46.0 18 TAACGGT 20 6.311464E-4 46.0 33 TGCGGCA 20 6.311464E-4 46.0 3 GTGGCGT 40 5.6115823E-9 46.0 34 ATCGTCC 30 1.86141E-6 46.0 34 CTTGGAC 20 6.311464E-4 46.0 35 AACGGCC 40 5.6115823E-9 46.0 5 GCCGAAT 20 6.311464E-4 46.0 39 ACGGCGT 20 6.311464E-4 46.0 3 CTCGGTA 30 1.86141E-6 46.0 20 CTACGTC 40 5.6115823E-9 46.0 13 AACGCTA 40 5.6115823E-9 46.0 9 ACTACGG 90 0.0 46.0 1 CTTTGCG 25 3.4171637E-5 46.0 38 TTGCGAT 25 3.4171637E-5 46.0 40 TCCGTTC 20 6.311464E-4 46.0 21 >>END_MODULE