##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043224_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1173180 Sequences flagged as poor quality 0 Sequence length 52 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.26825636304744 33.0 31.0 34.0 31.0 34.0 2 32.608465026679625 34.0 31.0 34.0 31.0 34.0 3 32.65900543821068 34.0 31.0 34.0 31.0 34.0 4 36.18875620109446 37.0 35.0 37.0 35.0 37.0 5 36.100719412195915 37.0 35.0 37.0 35.0 37.0 6 36.3299041920251 37.0 37.0 37.0 35.0 37.0 7 36.26722838780068 37.0 37.0 37.0 35.0 37.0 8 36.23837944731414 37.0 37.0 37.0 35.0 37.0 9 37.77804514226291 39.0 38.0 39.0 35.0 39.0 10 37.590268330520466 39.0 37.0 39.0 35.0 39.0 11 37.38507049216659 39.0 37.0 39.0 35.0 39.0 12 37.41276615694096 39.0 37.0 39.0 35.0 39.0 13 37.4200352887025 39.0 37.0 39.0 35.0 39.0 14 38.8541417344312 41.0 38.0 41.0 35.0 41.0 15 38.91685504355683 41.0 38.0 41.0 35.0 41.0 16 38.91958352511976 41.0 38.0 41.0 35.0 41.0 17 38.89989856628991 41.0 38.0 41.0 35.0 41.0 18 38.58063638998278 40.0 38.0 41.0 35.0 41.0 19 38.25370275661024 40.0 37.0 41.0 35.0 41.0 20 37.90105184200208 40.0 35.0 41.0 34.0 41.0 21 37.81161884791763 40.0 35.0 41.0 34.0 41.0 22 37.76267409945618 40.0 35.0 41.0 34.0 41.0 23 37.75573824988493 39.0 35.0 41.0 34.0 41.0 24 37.64570654119572 39.0 35.0 41.0 34.0 41.0 25 37.56336367820795 39.0 35.0 41.0 34.0 41.0 26 37.49946896469425 39.0 35.0 41.0 34.0 41.0 27 37.51904396597283 39.0 35.0 41.0 34.0 41.0 28 37.49480983310319 39.0 35.0 41.0 34.0 41.0 29 37.43177943708553 39.0 35.0 41.0 33.0 41.0 30 37.3840646789069 39.0 35.0 41.0 33.0 41.0 31 37.18923779812135 39.0 35.0 41.0 33.0 41.0 32 36.95478017013587 39.0 35.0 41.0 33.0 41.0 33 36.676665132375255 39.0 35.0 41.0 31.0 41.0 34 36.33780920233894 39.0 35.0 41.0 30.0 41.0 35 36.2049668422578 39.0 35.0 41.0 30.0 41.0 36 36.098956681839105 39.0 35.0 41.0 30.0 41.0 37 36.03342965273871 39.0 35.0 41.0 30.0 41.0 38 35.95291174414838 39.0 35.0 41.0 29.0 41.0 39 35.94852026117049 39.0 35.0 41.0 29.0 41.0 40 35.918514635435315 39.0 35.0 41.0 29.0 41.0 41 35.892213471078605 39.0 35.0 41.0 29.0 41.0 42 35.8186765884178 39.0 35.0 41.0 28.0 41.0 43 35.72612131130773 39.0 35.0 41.0 28.0 41.0 44 35.55992345590617 39.0 35.0 41.0 27.0 41.0 45 35.47828892412077 39.0 35.0 41.0 26.0 41.0 46 35.440667246287866 38.0 35.0 41.0 26.0 41.0 47 35.367339197736065 38.0 35.0 41.0 26.0 41.0 48 35.2995363030396 38.0 35.0 41.0 25.0 41.0 49 35.255855026509145 38.0 35.0 40.0 26.0 41.0 50 35.11557391022691 38.0 35.0 40.0 24.0 41.0 51 35.031726589270185 38.0 35.0 40.0 24.0 41.0 52 34.691944970081316 37.0 35.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 1.0 12 1.0 13 1.0 14 3.0 15 27.0 16 31.0 17 98.0 18 209.0 19 461.0 20 814.0 21 1450.0 22 2330.0 23 3885.0 24 7300.0 25 13660.0 26 19502.0 27 20707.0 28 18967.0 29 17896.0 30 19067.0 31 21745.0 32 26107.0 33 33043.0 34 58742.0 35 98651.0 36 127860.0 37 87634.0 38 147456.0 39 444842.0 40 689.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.22189263369645 18.974240951942583 23.772737346357765 31.031129068003203 2 36.54290049267802 18.859595288020596 24.51175437699245 20.08574984230894 3 20.82127209805827 20.48671133159447 40.048671133159445 18.643345437187815 4 21.140404711979407 23.492729163470226 37.58928723640021 17.777578888150156 5 19.7814487120476 28.70957568318587 33.60592577439097 17.90304983037556 6 71.25070321689766 1.588076850952113 23.45215567943538 3.7090642527148434 7 71.82887536439421 1.280110468981742 20.67687822840485 6.214135938219199 8 61.230075521232884 3.4905982031742786 27.375253584275217 7.904072691317615 9 31.13929661262551 22.069503401012632 30.85153173426073 15.939668252101127 10 22.638469800030688 18.947731805860993 45.57476261102303 12.83903578308529 11 20.775243355665797 16.940367207078197 43.09210862783205 19.19228080942396 12 17.466373446529946 19.380146269114714 45.27174005693926 17.88174022741608 13 13.310063246901585 22.26290935747285 44.47484614466663 19.95218125095893 14 12.685521403365213 21.958522988799672 45.4103377145877 19.945617893247412 15 13.904942123118364 19.65367633270257 47.047597129170285 19.39378441500878 16 14.051637429891406 24.289452598919176 41.23024599805657 20.428663973132853 17 14.854583269404525 22.17988714434273 42.64963603198145 20.315893554271298 18 15.997971325798257 27.161560885797577 40.793313898975434 16.04715388942873 19 16.185495831841664 23.20820334475528 38.966654733289005 21.63964609011405 20 14.161339265926799 28.413627917284646 37.55561806372424 19.869414753064323 21 14.51405581411207 23.40280263898123 39.40341635554646 22.679725191360234 22 12.90023696278491 25.200906936701955 36.841149695698874 25.05770640481427 23 12.727458701989464 22.53592799058968 44.43998363422493 20.29662967319593 24 16.57281917523313 21.910192809287576 40.44716070850168 21.06982730697762 25 13.928297447961949 24.779573466987163 39.996846178762 21.29528290628889 26 14.541246867488363 22.682708535774562 38.92974650096319 23.84629809577388 27 18.365042022537036 22.82607954448593 38.890281116282246 19.918597316694793 28 14.237883359757241 21.903799928399735 36.575376327588266 27.28294038425476 29 16.113469373838626 25.039039192621765 35.10330895514755 23.744182478392062 30 18.919688368366323 21.69556248827972 32.89222455207215 26.492524591281814 31 17.373037385567432 23.594759542440205 33.40033072503793 25.63187234695443 32 14.315876506588928 25.414173443120408 32.825141921955705 27.44480812833495 33 16.19359348096626 23.589900952965444 33.269575001278575 26.946930564789717 34 13.751086789750932 21.844559232172386 36.22462026287526 28.179733715201415 35 17.4910073475511 25.496172795308482 32.006682691488095 25.00613716565233 36 17.37235547827273 26.044170545014406 34.00228438943726 22.58118958727561 37 16.487666001807057 25.175676366797934 38.29173698835643 20.04492064303858 38 14.795001619529824 28.576007091835866 34.20131608107877 22.427675207555534 39 19.324229870949043 26.954942975502483 35.10987231285907 18.61095484068941 40 14.985765185223068 23.954550878808025 39.21717042568063 21.842513510288274 41 16.94565198861215 25.775925262960502 32.99894304369321 24.279479704734143 42 16.962614432567893 21.622598407746466 36.817879609267116 24.59690755041852 43 20.431050648664314 22.81772618012581 34.55982884126903 22.191394329940845 44 16.03573194224245 23.802741267324706 36.12634037402615 24.035186416406688 45 18.230109616597623 22.480096830835848 35.457559794745904 23.832233757820624 46 19.941867403126544 21.812339112497657 34.90453297874154 23.34126050563426 47 15.788881501559862 20.792035322797865 38.02954363354302 25.389539542099254 48 17.105559249220068 19.131505821783527 34.44177364087352 29.321161288122884 49 18.518215448609762 18.59944765509129 38.83862663870847 24.04371025759048 50 17.08459059990794 18.242895378373312 39.587360848292676 25.08515317342607 51 15.379566647914217 18.23812202731039 38.25440256397143 28.127908760803972 52 14.177705040999678 18.375696824016774 44.1874222199492 23.25917591503435 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 411.0 1 1741.0 2 3071.0 3 52628.5 4 102186.0 5 56272.5 6 10359.0 7 9718.5 8 9078.0 9 9446.0 10 9814.0 11 10148.5 12 10483.0 13 10172.0 14 9474.5 15 9088.0 16 8379.5 17 7671.0 18 6939.5 19 6208.0 20 5883.0 21 5558.0 22 5431.0 23 5304.0 24 5194.5 25 5085.0 26 6071.5 27 7058.0 28 7555.0 29 8052.0 30 8894.5 31 9737.0 32 12041.0 33 14345.0 34 16373.0 35 18401.0 36 20894.0 37 23387.0 38 25218.0 39 29180.5 40 31312.0 41 36943.0 42 42574.0 43 54234.5 44 65895.0 45 83959.5 46 102024.0 47 126627.5 48 151231.0 49 154359.5 50 157488.0 51 136859.0 52 116230.0 53 94407.0 54 72584.0 55 57976.5 56 43369.0 57 35766.5 58 28164.0 59 23447.0 60 18730.0 61 16240.0 62 13750.0 63 11373.0 64 7346.0 65 5696.0 66 4711.0 67 3726.0 68 3081.5 69 2437.0 70 2212.5 71 1988.0 72 2071.0 73 2154.0 74 1709.5 75 1265.0 76 1028.5 77 792.0 78 559.5 79 327.0 80 232.0 81 137.0 82 95.5 83 54.0 84 36.0 85 18.0 86 15.5 87 13.0 88 15.5 89 9.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1173180.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.66379556130408 #Duplication Level Percentage of deduplicated Percentage of total 1 76.39418718326984 26.481124865928614 2 10.972960078581059 7.6072888973257 3 3.789514994843622 3.9407691917326675 4 1.8983412785146234 2.63214855936062 5 1.1109650684357621 1.9255133004003726 6 0.7700126540158378 1.6014936731053304 7 0.5282102894488405 1.2816841440782303 8 0.4259858493329059 1.1813029114627465 9 0.3461556270295828 1.0799161098973633 >10 3.362733461775154 24.511545638805853 >50 0.26014003812096803 6.073801808489854 >100 0.1289579479553331 7.987932299244043 >500 0.007150631908654294 1.658835507271065 >1k 0.003945176225464439 3.1070686500575926 >5k 4.931470281830548E-4 1.1572018720601271 >10k+ 2.465735140915274E-4 7.772372570779797 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 90935 7.751154980480404 No Hit CCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTGCT 7000 0.5966688828653745 No Hit CTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTGCTT 6539 0.5573739750080977 Illumina Single End Adapter 2 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTGCT 4729 0.4030924495814794 No Hit CGCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTGC 4678 0.398745290577746 No Hit CGTTCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCT 3451 0.2941577592526296 No Hit CGTTTCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTC 2914 0.2483847320956716 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCG 2582 0.22008557936548526 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTT 2480 0.2113912613580184 No Hit TCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTGCT 2296 0.1957073935798428 No Hit CGTCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTG 1919 0.16357251231695052 No Hit ACCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTGC 1869 0.159310591725055 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCT 1676 0.14285957824033824 No Hit GCCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTGC 1653 0.14089909476806628 No Hit AGCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTGC 1352 0.11524233280485517 No Hit ACTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTGCT 1331 0.11345232615625905 No Hit TCCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTGC 1284 0.10944612079987727 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5730578427862733 0.0 2 0.0 0.0 0.0 1.9179495047648272 0.0 3 0.0 0.0 0.0 3.301965597776982 0.0 4 0.0 0.0 0.0 4.162703080516204 0.0 5 0.0 0.0 0.0 8.282701716701615 0.0 6 0.0 0.0 0.0 9.664416372594145 0.0 7 0.0 0.0 0.0 13.263011643567056 0.0 8 0.0 0.0 0.0 17.418554697488876 0.0 9 0.0 0.0 0.0 20.578513101143898 0.0 10 0.0 0.0 0.0 22.43918239315365 0.0 11 8.523841183791063E-5 0.0 0.0 24.174380742938 0.0 12 8.523841183791063E-5 0.0 0.0 25.41332105900203 0.0 13 8.523841183791063E-5 0.0 0.0 25.969927888303584 0.0 14 8.523841183791063E-5 0.0 0.0 26.369610801411547 0.0 15 8.523841183791063E-5 0.0 0.0 27.55348710342829 0.0 16 8.523841183791063E-5 0.0 0.0 28.940316064031094 0.0 17 8.523841183791063E-5 0.0 0.0 30.4209072776556 0.0 18 8.523841183791063E-5 0.0 0.0 31.277127124567414 0.0 19 8.523841183791063E-5 0.0 0.0 32.159174210266116 0.0 20 8.523841183791063E-5 0.0 0.0 33.14205833716906 0.0 21 3.409536473516425E-4 0.0 0.0 34.15017303397603 0.0 22 5.966688828653744E-4 0.0 0.0 35.15666820095808 0.0 23 6.81907294703285E-4 0.0 0.0 35.94171397398524 0.0 24 0.0014490530012444807 0.0 0.0 36.603590241906616 0.0 25 0.0014490530012444807 0.0 0.0 37.25165788711025 0.0 26 0.0014490530012444807 0.0 0.0 37.901174585315125 0.0 27 0.0014490530012444807 0.0 0.0 38.49988919006461 0.0 28 0.0014490530012444807 0.0 0.0 39.1235786494826 0.0 29 0.0014490530012444807 0.0 0.0 39.85773709064253 0.0 30 0.0014490530012444807 0.0 0.0 40.48833086141939 0.0 31 0.0014490530012444807 0.0 0.0 41.04800627354711 0.0 32 0.0014490530012444807 0.0 0.0 41.62430317598322 0.0 33 0.0014490530012444807 0.0 0.0 42.201452462537716 0.0 34 0.0014490530012444807 0.0 0.0 42.825482875603065 0.0 35 0.0014490530012444807 0.0 0.0 43.351574353466646 0.0 36 0.0014490530012444807 0.0 0.0 43.90264068599874 0.0 37 0.0014490530012444807 0.0 0.0 44.441688402461686 0.0 38 0.0015342914130823916 0.0 0.0 44.96607511208851 0.0 39 0.0015342914130823916 0.0 0.0 45.51586286844304 0.0 40 0.0015342914130823916 0.0 0.0 46.03828909459759 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTACGG 55 1.8189894E-12 46.000004 1 ATACCGG 45 3.092282E-10 46.000004 1 CCGCACT 70 0.0 46.000004 33 CTAGCGG 145 0.0 46.000004 1 ACGCCTA 25 3.4171993E-5 46.0 24 TTCGTGG 30 1.8614373E-6 46.0 1 CGTCTAG 20 6.3115085E-4 46.0 20 CACGACC 40 5.6115823E-9 46.0 26 GCCGATT 25 3.4171993E-5 46.0 8 GCGATCG 40 5.6115823E-9 46.0 8 GCGATAG 115 0.0 46.0 8 CCAACGC 20 6.3115085E-4 46.0 39 CATCCCG 20 6.3115085E-4 46.0 19 AACAGCG 20 6.3115085E-4 46.0 44 TAGTCGG 30 1.8614373E-6 46.0 1 CGTTTTT 18040 0.0 45.808758 1 ATTGCGG 200 0.0 44.85 1 TTCACGG 165 0.0 44.60606 1 TACGGGA 295 0.0 44.44068 3 TCACGAC 120 0.0 44.083332 24 >>END_MODULE