##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043211_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1010094 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.2527675642069 33.0 31.0 34.0 31.0 34.0 2 32.54640558205474 34.0 31.0 34.0 31.0 34.0 3 32.620451165931094 34.0 31.0 34.0 31.0 34.0 4 36.16845065904757 37.0 35.0 37.0 35.0 37.0 5 36.12636645698321 37.0 37.0 37.0 35.0 37.0 6 36.346928107681066 37.0 37.0 37.0 35.0 37.0 7 36.2910491498811 37.0 37.0 37.0 35.0 37.0 8 36.18850324821254 37.0 37.0 37.0 35.0 37.0 9 37.725254283264725 39.0 38.0 39.0 35.0 39.0 10 37.51925365362035 39.0 37.0 39.0 35.0 39.0 11 37.347883464311245 39.0 37.0 39.0 35.0 39.0 12 37.38268715584886 39.0 37.0 39.0 35.0 39.0 13 37.39836787467305 39.0 37.0 39.0 35.0 39.0 14 38.805566610632276 40.0 38.0 41.0 35.0 41.0 15 38.885610646137884 40.0 38.0 41.0 35.0 41.0 16 38.914501026637126 41.0 38.0 41.0 35.0 41.0 17 38.86762915134631 41.0 38.0 41.0 35.0 41.0 18 38.65508754630757 40.0 38.0 41.0 35.0 41.0 19 38.40910053915774 40.0 37.0 41.0 35.0 41.0 20 38.14292630190854 40.0 35.0 41.0 35.0 41.0 21 38.07946290147254 40.0 35.0 41.0 34.0 41.0 22 38.03807467423824 40.0 35.0 41.0 34.0 41.0 23 38.017127118862206 40.0 35.0 41.0 34.0 41.0 24 37.94550903183268 40.0 35.0 41.0 34.0 41.0 25 37.915372232683296 40.0 35.0 41.0 34.0 41.0 26 37.87120307614935 40.0 35.0 41.0 34.0 41.0 27 37.85969523628494 40.0 35.0 41.0 34.0 41.0 28 37.79302124356743 40.0 35.0 41.0 34.0 41.0 29 37.78511108867095 40.0 35.0 41.0 34.0 41.0 30 37.59294085500953 40.0 35.0 41.0 34.0 41.0 31 37.479736539371586 40.0 35.0 41.0 33.0 41.0 32 37.203241480495876 40.0 35.0 41.0 33.0 41.0 33 36.920533138499984 40.0 35.0 41.0 32.0 41.0 34 36.628652382847534 40.0 35.0 41.0 31.0 41.0 35 36.504358010244594 40.0 35.0 41.0 31.0 41.0 36 36.427756228628226 40.0 35.0 41.0 31.0 41.0 37 36.34219092480502 40.0 35.0 41.0 30.0 41.0 38 36.291024399709336 40.0 35.0 41.0 30.0 41.0 39 36.209884426597924 40.0 35.0 41.0 30.0 41.0 40 36.108213691003016 39.0 35.0 41.0 30.0 41.0 41 36.03051894180145 39.0 35.0 41.0 29.0 41.0 42 35.8963254904989 39.0 35.0 41.0 28.0 41.0 43 35.77681879112241 39.0 35.0 41.0 28.0 41.0 44 35.6631442222209 39.0 35.0 41.0 27.0 41.0 45 35.614113141945204 39.0 35.0 41.0 27.0 41.0 46 35.50257599787742 38.0 35.0 40.0 27.0 41.0 47 35.35042283193445 38.0 35.0 40.0 26.0 41.0 48 35.323303573726804 38.0 35.0 40.0 26.0 41.0 49 35.2248503604615 38.0 35.0 40.0 26.0 41.0 50 35.09034505699469 38.0 35.0 40.0 26.0 41.0 51 34.65406981924455 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 1.0 14 7.0 15 5.0 16 24.0 17 62.0 18 166.0 19 322.0 20 586.0 21 1005.0 22 1708.0 23 2779.0 24 4889.0 25 9496.0 26 14758.0 27 17308.0 28 16349.0 29 15301.0 30 15780.0 31 17756.0 32 21523.0 33 27453.0 34 50871.0 35 90554.0 36 87298.0 37 78051.0 38 142066.0 39 393903.0 40 72.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.63563985134057 19.290778878005412 25.908875807598104 28.16470546305591 2 32.78516652905571 20.609864032456386 26.187067738250104 20.4179017002378 3 21.908852047433207 21.768865075923628 35.980413704071104 20.341869172572057 4 22.842428526453972 24.384265226800675 33.833979807819865 18.939326438925484 5 20.93280427366166 30.43122719271672 30.056806594237763 18.57916193938386 6 76.71731541816901 1.4865943169645597 18.640542365364016 3.1555478995024226 7 77.2371680259461 1.174148148588151 15.922973505436127 5.665710320029621 8 67.41016182652308 3.343946206986677 22.1283365706558 7.117555395834447 9 32.413121947066315 26.8929426370219 25.52653515415397 15.167400261757816 10 23.362182133544007 20.303357905303862 43.416553310879976 12.917906650272155 11 21.787972208527126 17.809530598142352 40.48573697101458 19.916760222315943 12 17.93140044391908 21.775300120582834 42.316259674842144 17.977039760655938 13 14.8535680837625 25.119939332378966 40.68156033002869 19.344932253829842 14 13.37420081695367 23.05765602013278 44.011250438078044 19.55689272483551 15 14.390244868299387 20.310485954772524 45.22202884088016 20.077240336047932 16 14.922769564020774 23.857779572990236 38.67570740940942 22.543743453579566 17 15.266994952944973 22.086459280027405 41.496830988007055 21.149714779020567 18 17.127811867014355 26.81938512653278 39.132001576090936 16.920801430361927 19 17.359473474745915 23.79600314426182 36.82261254893109 22.021910832061174 20 15.142650089991625 28.259053117828635 36.20930329256485 20.388993499614887 21 15.549839915889017 22.918461054119714 37.19059810275083 24.341100927240436 22 13.408950058113403 25.14102647872376 35.2734497977416 26.176573665421238 23 12.81009490205862 22.367027227168958 43.26201323837188 21.56086463240055 24 16.859124002320577 22.485432048898417 38.80609131427372 21.849352634507284 25 14.969596889002409 25.584648557460987 38.067249186709354 21.37850536682725 26 16.252843794735934 23.20734505897471 37.144463782578654 23.3953473637107 27 19.835678659609897 23.45167875465056 38.2160472193677 18.496595366371842 28 16.441539104281382 23.190613942860764 35.22503846176692 25.14280849109093 29 20.51838739760854 22.522656307234772 34.0845505467808 22.874405748375896 30 19.936758361103028 25.005494538132094 32.605480282033156 22.452266818731722 31 23.961532293034114 21.932414210954622 31.315798331640423 22.79025516437084 32 19.4462099566971 24.440398616366398 30.834753993192717 25.27863743374379 33 19.154751933978424 23.86639263276487 34.21582545782867 22.76302997542803 34 18.648165418268004 22.783523117650436 31.645173617504906 26.923137846576655 35 20.171092987385332 21.512849299174135 32.83120184854083 25.484855864899703 36 17.234732609044308 25.354570960722466 32.74962528239946 24.661071147833766 37 16.50935457492075 22.589382770316426 35.26731175514358 25.633950899619247 38 15.910796420927161 24.138842523567114 31.1520511952353 28.798309860270432 39 20.352561246775053 22.703926565250363 33.09127665345997 23.85223553451461 40 16.265713884054357 22.01597079083729 36.28563282229179 25.43268250281657 41 20.42136672428507 23.79639914701008 30.141749183739336 25.640484944965518 42 20.165548948909706 21.309303886568973 33.858828980273124 24.666318184248198 43 22.281886636293255 22.564533597863168 33.28125897193727 21.87232079390631 44 17.343732365502618 23.90767591927088 33.87556009638707 24.873031618839434 45 19.710442790472964 21.567596679120953 33.64003746185998 25.081923068546097 46 22.010129750300468 20.994184699641817 31.87822123485537 25.117464315202348 47 17.882890107257342 20.30642692660287 35.25889669674307 26.55178626939671 48 18.821614622005477 18.82102061788309 32.59449120576897 29.762873554342466 49 19.8531027805333 18.76686724205866 36.090007464651805 25.290022512756238 50 18.78864739321291 18.0468352450366 36.510463382615875 26.654053979134616 51 16.911891368526096 17.934172463156894 35.526297552505014 29.627638615811996 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 241.0 1 1229.0 2 2217.0 3 30131.5 4 58046.0 5 32904.5 6 7763.0 7 7299.0 8 6835.0 9 7083.5 10 7332.0 11 7416.0 12 7500.0 13 7240.0 14 6980.0 15 6448.5 16 5917.0 17 5598.5 18 5280.0 19 4984.0 20 4688.0 21 4695.5 22 4703.0 23 4485.5 24 4268.0 25 4822.0 26 6513.0 27 7650.0 28 8108.5 29 8567.0 30 10156.5 31 11746.0 32 13418.0 33 15090.0 34 18041.5 35 20993.0 36 22708.0 37 24423.0 38 25745.5 39 27068.0 40 31389.5 41 35711.0 42 41246.5 43 46782.0 44 51998.0 45 57214.0 46 63201.0 47 69188.0 48 84884.0 49 100580.0 50 118467.0 51 136354.0 52 133659.0 53 130964.0 54 104416.5 55 77869.0 56 59975.0 57 42081.0 58 33204.0 59 24327.0 60 19493.5 61 14660.0 62 11892.0 63 9124.0 64 7682.0 65 6240.0 66 5238.0 67 4236.0 68 3678.0 69 3120.0 70 2633.5 71 2147.0 72 2358.5 73 2570.0 74 2150.0 75 1534.5 76 1339.0 77 986.0 78 633.0 79 458.5 80 284.0 81 212.0 82 140.0 83 104.5 84 69.0 85 47.0 86 25.0 87 23.5 88 22.0 89 11.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1010094.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.301704719638785 #Duplication Level Percentage of deduplicated Percentage of total 1 73.44820784831705 24.45950529951311 2 11.824816642885828 7.875731044105086 3 4.511823582084197 4.507542500330127 4 2.2298372305439775 2.9702952409773062 5 1.3403747355477316 2.231838182843724 6 0.886426273426788 1.7711703608033214 7 0.6163795650143398 1.436854318852886 8 0.462786145432831 1.232925405083516 9 0.3640742632665183 1.0911864250189462 >10 3.8025573627610214 27.70675804122425 >50 0.380712322698752 8.393597176610305 >100 0.12150370761024576 6.900157263385563 >500 0.006000183091824912 1.3277794835304164 >1k 0.0036001098550949473 1.9479094499919132 >5k 6.000183091824913E-4 1.0990896988952679 >10k+ 3.0000915459124563E-4 5.047660108834253 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 50523 5.001811712573286 No Hit CCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTGC 5801 0.5743029856627205 No Hit CTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTGCT 5200 0.5148035727367948 No Hit GCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTGC 3624 0.35877848992272005 No Hit CGCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTG 3015 0.2984870715002762 No Hit TCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTGC 1683 0.16661815633000493 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCC 1665 0.1648361439628391 No Hit CGTTCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTC 1529 0.15137205052203062 No Hit ACCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTG 1399 0.13850196120361075 No Hit GCCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTG 1294 0.1281068890618101 No Hit AGCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTG 1167 0.11553380180458453 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTT 1056 0.10454472554039525 No Hit TCCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTG 1037 0.10266371248616465 No Hit CGTCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCT 1017 0.10068369874486928 No Hit ACTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTGC 1011 0.10008969462248068 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5268816565586966 0.0 2 0.0 0.0 0.0 1.7588462063926724 0.0 3 0.0 0.0 0.0 2.962001556290801 0.0 4 0.0 0.0 0.0 3.7292568810427547 0.0 5 0.0 0.0 0.0 7.323971828364489 0.0 6 0.0 0.0 0.0 8.294970567095735 0.0 7 0.0 0.0 0.0 11.53674806503157 0.0 8 0.0 0.0 0.0 15.377677721083383 0.0 9 0.0 0.0 0.0 18.445808013907616 0.0 10 0.0 0.0 0.0 20.311475961643175 0.0 11 0.0 0.0 0.0 22.055571065663194 0.0 12 0.0 0.0 0.0 23.350500052470363 0.0 13 0.0 0.0 0.0 23.914605967365414 0.0 14 0.0 0.0 0.0 24.31694475959663 0.0 15 0.0 0.0 0.0 25.58138153478785 0.0 16 0.0 0.0 0.0 27.147968406900745 0.0 17 0.0 0.0 0.0 28.8242480402814 0.0 18 0.0 0.0 0.0 29.77762465671512 0.0 19 0.0 0.0 0.0 30.764265504002598 0.0 20 0.0 0.0 0.0 31.84436299987922 0.0 21 0.0 0.0 0.0 32.931885547285695 0.0 22 2.970020611943047E-4 0.0 0.0 34.092371601058915 0.0 23 2.970020611943047E-4 0.0 0.0 35.012384985951805 0.0 24 6.930048094533776E-4 0.0 0.0 35.7376640193883 0.0 25 6.930048094533776E-4 0.0 0.0 36.45304298411831 0.0 26 6.930048094533776E-4 0.0 0.0 37.09634944866517 0.0 27 6.930048094533776E-4 0.0 0.0 37.76836611246082 0.0 28 7.920054965181459E-4 0.0 0.0 38.46622195558037 0.0 29 7.920054965181459E-4 0.0 0.0 39.30723279219558 0.0 30 7.920054965181459E-4 0.0 0.0 40.02766079196589 0.0 31 7.920054965181459E-4 0.0 0.0 40.62295192328635 0.0 32 7.920054965181459E-4 0.0 0.0 41.24843826416156 0.0 33 7.920054965181459E-4 0.0 0.0 41.87778563183228 0.0 34 7.920054965181459E-4 0.0 0.0 42.581581516175724 0.0 35 7.920054965181459E-4 0.0 0.0 43.20627585155441 0.0 36 7.920054965181459E-4 0.0 0.0 43.80473500486093 0.0 37 7.920054965181459E-4 0.0 0.0 44.396561112134115 0.0 38 9.900068706476823E-4 0.0 0.0 44.969379087490864 0.0 39 9.900068706476823E-4 0.0 0.0 45.56457121812426 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCGTGA 20 7.03288E-4 45.0 18 GCAACCG 20 7.03288E-4 45.0 35 GGCAACG 20 7.03288E-4 45.0 7 CAACCGG 40 6.8139343E-9 45.0 1 GCACGGA 20 7.03288E-4 45.0 2 TGTATCG 25 3.890469E-5 45.0 11 CGTTATC 20 7.03288E-4 45.0 16 CCGTAGA 20 7.03288E-4 45.0 39 CGTAGAC 20 7.03288E-4 45.0 40 GTCACGG 55 1.8189894E-12 45.0 1 CAGGCGA 20 7.03288E-4 45.0 4 TTAACGG 95 0.0 45.0 1 ACGTCCG 20 7.03288E-4 45.0 39 TCATCGG 40 6.8139343E-9 45.0 1 CGTAAGG 20 7.03288E-4 45.0 1 ACGTATA 20 7.03288E-4 45.0 25 TCTCACG 95 0.0 45.0 22 CGGTCTA 90 0.0 45.0 30 GCGGAAT 20 7.03288E-4 45.0 4 CGACTCA 25 3.890469E-5 45.0 21 >>END_MODULE