##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043208_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1209808 Sequences flagged as poor quality 0 Sequence length 52 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.27892442437147 33.0 31.0 34.0 31.0 34.0 2 32.59623014560988 34.0 31.0 34.0 31.0 34.0 3 32.67168261410075 34.0 31.0 34.0 31.0 34.0 4 36.185692275137875 37.0 35.0 37.0 35.0 37.0 5 36.08269246029122 37.0 35.0 37.0 35.0 37.0 6 36.31512934283787 37.0 37.0 37.0 35.0 37.0 7 36.233230396889425 37.0 37.0 37.0 35.0 37.0 8 36.219608400671845 37.0 37.0 37.0 35.0 37.0 9 37.76325912872125 39.0 38.0 39.0 35.0 39.0 10 37.58993658497877 39.0 37.0 39.0 35.0 39.0 11 37.25285334532422 39.0 37.0 39.0 34.0 39.0 12 37.27486262282941 39.0 37.0 39.0 34.0 39.0 13 37.2459067885152 39.0 37.0 39.0 34.0 39.0 14 38.66044612037613 40.0 38.0 41.0 34.0 41.0 15 38.765210678058004 41.0 38.0 41.0 35.0 41.0 16 38.7719398450002 41.0 38.0 41.0 35.0 41.0 17 38.71473903297052 40.0 38.0 41.0 35.0 41.0 18 38.456231897954055 40.0 38.0 41.0 35.0 41.0 19 38.17606843399945 40.0 37.0 41.0 34.0 41.0 20 37.89440225225821 40.0 35.0 41.0 34.0 41.0 21 37.785718890931456 40.0 35.0 41.0 34.0 41.0 22 37.77081983256847 40.0 35.0 41.0 34.0 41.0 23 37.72218814886329 39.0 35.0 41.0 34.0 41.0 24 37.637031661222274 39.0 35.0 41.0 34.0 41.0 25 37.53856810336847 39.0 35.0 41.0 34.0 41.0 26 37.46132609471916 39.0 35.0 41.0 33.0 41.0 27 37.4600845754037 39.0 35.0 41.0 33.0 41.0 28 37.47875200031741 39.0 35.0 41.0 33.0 41.0 29 37.47818744792562 39.0 35.0 41.0 33.0 41.0 30 37.332017973099866 39.0 35.0 41.0 33.0 41.0 31 37.212903204475424 39.0 35.0 41.0 33.0 41.0 32 36.96398684749977 39.0 35.0 41.0 33.0 41.0 33 36.7264656871173 39.0 35.0 41.0 32.0 41.0 34 36.406043768928626 39.0 35.0 41.0 31.0 41.0 35 36.30648416938886 39.0 35.0 41.0 30.0 41.0 36 36.238033638395514 39.0 35.0 41.0 30.0 41.0 37 36.17415821353471 39.0 35.0 41.0 30.0 41.0 38 36.133126082816446 39.0 35.0 41.0 30.0 41.0 39 36.15399303029902 39.0 35.0 41.0 30.0 41.0 40 36.14140921534657 39.0 35.0 41.0 30.0 41.0 41 36.12361300305503 39.0 35.0 41.0 30.0 41.0 42 36.07127907899435 39.0 35.0 41.0 30.0 41.0 43 35.97788657373732 39.0 35.0 41.0 30.0 41.0 44 35.83233537883697 39.0 35.0 41.0 29.0 41.0 45 35.717540303915996 39.0 35.0 41.0 28.0 41.0 46 35.679121811064235 39.0 35.0 41.0 28.0 41.0 47 35.59484232208747 38.0 35.0 41.0 27.0 41.0 48 35.54410369248674 38.0 35.0 41.0 27.0 41.0 49 35.49432223956198 38.0 35.0 40.0 27.0 41.0 50 35.356592120402574 38.0 35.0 40.0 26.0 41.0 51 35.274560922063664 38.0 35.0 40.0 26.0 41.0 52 34.9456517067171 38.0 35.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 5.0 13 3.0 14 5.0 15 11.0 16 54.0 17 103.0 18 223.0 19 441.0 20 802.0 21 1385.0 22 2177.0 23 3840.0 24 7273.0 25 13055.0 26 18379.0 27 19879.0 28 18526.0 29 17307.0 30 18943.0 31 22357.0 32 27586.0 33 36460.0 34 64965.0 35 115730.0 36 113554.0 37 91397.0 38 153931.0 39 460797.0 40 619.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.999986774760952 19.76726885588457 25.85418512689617 27.378559242458305 2 33.4787007525161 19.113198127306152 27.4244342903998 19.98366682977795 3 20.841240924179704 21.588962876753996 38.83194688743999 18.73784931162631 4 22.379088252020154 24.009016306719744 36.36915940380622 17.242736037453877 5 20.038964860539853 29.23687064393689 31.79562376839961 18.928540727123643 6 72.60681033684683 1.6618339438985361 21.70832065914591 4.023035060108712 7 73.76393609564494 1.5082558554745877 17.850766402602726 6.877041646277757 8 61.30261991985505 3.541305727851031 25.934776427333922 9.221297924959995 9 35.29204634123762 16.902103474270298 29.201575787232354 18.60427439725973 10 27.304828534775766 19.654110404295558 41.20910094824964 11.831960112679036 11 24.007859098303204 16.462529591472368 40.504443680319525 19.02516762990491 12 19.506731646674513 19.83843717350191 42.45053760596723 18.204293573856347 13 14.287721688069514 23.126892862338487 42.019477470805285 20.565907978786715 14 12.754172562919075 22.734103262666473 43.00045957705685 21.511264597357595 15 13.958413235819236 18.201813841535184 46.926867734384295 20.912905188261277 16 14.72159218652877 25.24458426461058 37.909899752688034 22.123923796172615 17 16.28332760239641 21.835200296245354 40.41566926322193 21.465802838136298 18 18.069313477841114 27.373021173607714 38.67679830187931 15.880867046671868 19 17.181238675889066 23.28972861809477 36.1281294221893 23.400903283826853 20 14.49775501567191 29.424917011624984 35.125160356023436 20.95216761667967 21 15.18092127015196 23.725996191131156 37.04885403303665 24.04422850568024 22 13.339141417481121 26.82409109544655 32.75858648645074 27.078181000621587 23 13.371212622168146 23.189134143599645 43.17528070569875 20.264372528533453 24 17.901104968722308 21.744194120058722 38.26061656064434 22.094084350574636 25 14.686627960800392 25.37237313689445 37.877828548001006 22.063170354304155 26 16.843499133746842 21.771719148823614 37.18424741777208 24.200534299657466 27 21.497047465382938 21.52085289566609 38.65274489836404 18.329354740586936 28 15.734728155211405 21.484152857312896 36.484384298996204 26.296734688479496 29 22.008616243238595 21.61012325922791 34.5173779641067 21.863882533426793 30 21.9437299141682 20.23668218428048 36.51306653617764 21.30652136537368 31 21.92504926401545 20.157330750003304 32.93101054051552 24.986609445465728 32 19.46226178038168 20.716841019401425 39.82673283694603 19.994164363270865 33 20.61608122941822 18.799511988679196 38.05512940896406 22.529277372938516 34 16.022211788978087 17.880109901736475 43.78273246663934 22.314945842646104 35 20.45886620025657 22.658802057847197 37.32063269543597 19.561699046460266 36 19.4093608241969 20.202709851480567 41.91367555843572 18.474253765886818 37 17.444255617420286 23.347919669898033 41.949879650324675 17.257945062357003 38 15.954349781122293 24.24318569558145 38.515698358747834 21.286766164548425 39 22.199059685503816 21.257174692182563 39.73275098197399 16.811014640339625 40 16.466166532210067 19.11766164548424 43.39845661460331 21.017715207702377 41 18.956396386864693 22.471251636623332 34.79105775461891 23.78129422189306 42 18.790336979090895 18.04864904183143 40.572801634639546 22.588212344438123 43 23.19921838837237 20.12724333117321 36.269308849007444 20.404229431446975 44 17.089488580006083 22.52894674196236 37.537774589025695 22.843790089005857 45 19.50119357782392 20.61608122941822 37.080098660283284 22.802626532474573 46 22.736830968219753 19.144608070040867 36.5580323489347 21.560528612804678 47 16.505263645140385 18.121718487561665 41.11173012577202 24.261287741525926 48 18.157922579450624 15.8905380027244 36.477854337217146 29.47368508060783 49 20.05739753746049 16.60999100683745 40.35458519037732 22.978026265324747 50 18.45276275243675 16.34490762170526 40.755309933477044 24.447019692380938 51 16.463273511168712 15.45336119450359 39.50469826617116 28.578667028156534 52 15.068754711491412 16.021715842513853 46.811890812426434 22.0976386335683 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 334.0 1 1869.5 2 3405.0 3 40011.5 4 76618.0 5 43031.0 6 9444.0 7 9070.5 8 8697.0 9 9114.0 10 9531.0 11 9729.5 12 9928.0 13 9669.0 14 8663.0 15 7916.0 16 7169.0 17 6422.0 18 5902.5 19 5383.0 20 4925.0 21 4467.0 22 4124.5 23 3782.0 24 3542.5 25 3303.0 26 3774.0 27 4245.0 28 4401.0 29 4557.0 30 5459.0 31 6361.0 32 8021.5 33 9682.0 34 11635.0 35 13588.0 36 15948.5 37 18309.0 38 21554.0 39 29452.0 40 34105.0 41 47522.5 42 60940.0 43 86302.0 44 111664.0 45 145268.5 46 178873.0 47 182628.5 48 186384.0 49 162464.5 50 138545.0 51 113149.0 52 87753.0 53 71691.0 54 55629.0 55 45890.5 56 36152.0 57 31836.5 58 27521.0 59 23449.5 60 19378.0 61 15924.0 62 12470.0 63 9873.0 64 5778.5 65 4281.0 66 3528.0 67 2775.0 68 2366.0 69 1957.0 70 1670.5 71 1384.0 72 1268.5 73 1153.0 74 934.0 75 715.0 76 510.5 77 306.0 78 281.0 79 256.0 80 166.0 81 76.0 82 45.5 83 15.0 84 11.0 85 7.0 86 5.5 87 4.0 88 3.0 89 3.0 90 4.0 91 2.0 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1209808.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.799206246708266 #Duplication Level Percentage of deduplicated Percentage of total 1 72.07337165450726 22.19802638482826 2 12.28451041677736 7.56706339932324 3 5.094982415570875 4.7076424272155775 4 2.6047638450538217 3.2089863555112603 5 1.5432533784040592 2.3765489546197966 6 0.966324007833055 1.7857207451037596 7 0.6860115586622728 1.4790028038005605 8 0.49685882758786865 1.2242286005101144 9 0.3887591379335187 1.0776125582556255 >10 3.1963234239493987 21.44917468776 >50 0.4611880073824395 9.589741101669338 >100 0.18695159852017035 10.758924062543091 >500 0.010236542856142748 2.1080442221103937 >1k 0.005387654134811973 2.900137192375189 >5k 8.081481202217959E-4 1.9983608758560665 >10k+ 2.6938270674059864E-4 5.5707856285178 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 67144 5.54997156573605 No Hit CCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGCT 9158 0.7569796199066299 No Hit CTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGCTT 8864 0.7326782431592451 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGCT 6064 0.5012365598508193 No Hit CGCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC 3939 0.32558885376853186 No Hit TCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGCT 3306 0.2732665017920199 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCG 3241 0.26789374842950286 No Hit ACCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC 2206 0.18234298334942403 No Hit GCCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC 2089 0.17267202729689338 No Hit CGTTCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCT 2000 0.165315488077447 No Hit AGCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC 1871 0.15465263909645166 No Hit TCCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC 1726 0.14266726621083675 No Hit ACTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGCT 1596 0.1319217594858027 No Hit TGCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC 1313 0.10852961792284395 No Hit CGTCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTG 1283 0.10604988560168226 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCT 1275 0.10538862364937246 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTT 1222 0.10100776321532012 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.75631835795432 0.0 2 0.0 0.0 0.0 2.4658458201631994 0.0 3 0.0 0.0 0.0 4.026589343102376 0.0 4 0.0 0.0 0.0 4.9785585811963555 0.0 5 0.0 0.0 0.0 10.037129858622194 0.0 6 0.0 0.0 0.0 11.28716292171981 0.0 7 0.0 0.0 0.0 15.186376681258514 0.0 8 0.0 0.0 0.0 20.01325830214381 0.0 9 0.0 0.0 0.0 23.498687395024664 0.0 10 0.0 0.0 0.0 25.814096121037387 0.0 11 0.0 0.0 0.0 27.85367595519289 0.0 12 0.0 0.0 0.0 29.22455464007512 0.0 13 0.0 0.0 0.0 29.840850779627843 0.0 14 0.0 0.0 0.0 30.269844471188815 0.0 15 0.0 0.0 0.0 31.664528586354198 0.0 16 0.0 0.0 0.0 33.29495258751802 0.0 17 0.0 0.0 0.0 35.0044800497269 0.0 18 0.0 0.0 0.0 35.976783092854404 0.0 19 0.0 0.0 0.0 37.00636795260074 0.0 20 0.0 0.0 0.0 38.171015566106355 0.0 21 0.0 0.0 0.0 39.36054316056763 0.0 22 1.65315488077447E-4 0.0 0.0 40.46377607025247 0.0 23 2.479732321161705E-4 0.0 0.0 41.31539880708344 0.0 24 0.00165315488077447 0.0 0.0 42.07890838876913 0.0 25 0.00165315488077447 0.0 0.0 42.810842712232024 0.0 26 0.00165315488077447 0.0 0.0 43.584353880946395 0.0 27 0.00165315488077447 0.0 0.0 44.31132873976697 0.0 28 0.00165315488077447 0.0 0.0 45.01987092166691 0.0 29 0.00165315488077447 0.0 0.0 45.841736870643935 0.0 30 0.00165315488077447 0.0 0.0 46.546476796318096 0.0 31 0.00165315488077447 0.0 0.0 47.203523203681904 0.0 32 0.00165315488077447 0.0 0.0 47.84337680028567 0.0 33 0.00165315488077447 0.0 0.0 48.48397431658577 0.0 34 0.00165315488077447 0.0 0.0 49.20276605874651 0.0 35 0.00165315488077447 0.0 0.0 49.79087590758203 0.0 36 0.00165315488077447 0.0 0.0 50.356502850039014 0.0 37 0.00165315488077447 0.0 0.0 50.94742306217185 0.0 38 0.00165315488077447 0.0 0.0 51.53288786319813 0.0 39 0.00165315488077447 0.0 0.0 52.107276526523215 0.0 40 0.00165315488077447 0.0 0.0 52.66728274238557 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGCGA 35 1.0196345E-7 46.000004 39 GACACCG 35 1.0196345E-7 46.000004 31 GGGCGCA 35 1.0196345E-7 46.000004 6 TCGGTTA 35 1.0196345E-7 46.000004 35 CGATAGT 35 1.0196345E-7 46.000004 9 TGATCCG 20 6.311587E-4 46.0 10 AATCCGG 45 3.092282E-10 46.0 1 GTACCGG 60 0.0 46.0 1 TCCATCG 20 6.311587E-4 46.0 17 ACCGGCC 20 6.311587E-4 46.0 20 GATCGAT 20 6.311587E-4 46.0 8 CAACGCA 65 0.0 46.0 16 GTTTAGT 20 6.311587E-4 46.0 20 CCGGATG 20 6.311587E-4 46.0 11 CAACCGG 60 0.0 46.0 1 CGACCCC 25 3.417264E-5 46.0 19 CGATTAC 25 3.417264E-5 46.0 9 GCACCGG 25 3.417264E-5 46.0 1 TATTGTC 25 3.417264E-5 46.0 28 AATGCGT 20 6.311587E-4 46.0 1 >>END_MODULE