##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043207_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1200533 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.213734233044825 33.0 31.0 34.0 30.0 34.0 2 32.50249264285113 34.0 31.0 34.0 31.0 34.0 3 32.56511399520046 34.0 31.0 34.0 31.0 34.0 4 36.13230206916428 37.0 35.0 37.0 35.0 37.0 5 36.08537041464083 37.0 35.0 37.0 35.0 37.0 6 36.31503673784894 37.0 37.0 37.0 35.0 37.0 7 36.24495619862178 37.0 37.0 37.0 35.0 37.0 8 36.15390997165426 37.0 37.0 37.0 35.0 37.0 9 37.70639374344562 39.0 38.0 39.0 35.0 39.0 10 37.522778632490734 39.0 37.0 39.0 35.0 39.0 11 37.240743902916456 39.0 37.0 39.0 34.0 39.0 12 37.270465701484255 39.0 37.0 39.0 34.0 39.0 13 37.254067151840054 39.0 37.0 39.0 34.0 39.0 14 38.656475915280964 40.0 38.0 41.0 35.0 41.0 15 38.77408617672317 40.0 38.0 41.0 35.0 41.0 16 38.81025594465125 40.0 38.0 41.0 35.0 41.0 17 38.74551636648056 40.0 38.0 41.0 35.0 41.0 18 38.510324997313695 40.0 38.0 41.0 35.0 41.0 19 38.255777225615624 40.0 37.0 41.0 35.0 41.0 20 37.99841986850841 40.0 35.0 41.0 34.0 41.0 21 37.89057860133791 40.0 35.0 41.0 34.0 41.0 22 37.886580377215786 40.0 35.0 41.0 34.0 41.0 23 37.80939965831843 40.0 35.0 41.0 34.0 41.0 24 37.7235686149402 39.0 35.0 41.0 34.0 41.0 25 37.69552273865025 39.0 35.0 41.0 34.0 41.0 26 37.659743630537434 39.0 35.0 41.0 34.0 41.0 27 37.622289433110126 39.0 35.0 41.0 34.0 41.0 28 37.58668191544922 39.0 35.0 41.0 34.0 41.0 29 37.61827954750098 40.0 35.0 41.0 34.0 41.0 30 37.4358039304209 39.0 35.0 41.0 33.0 41.0 31 37.30959332229934 39.0 35.0 41.0 33.0 41.0 32 37.07860925105766 39.0 35.0 41.0 33.0 41.0 33 36.81705125973214 39.0 35.0 41.0 32.0 41.0 34 36.474026120065005 39.0 35.0 41.0 31.0 41.0 35 36.37155663359525 39.0 35.0 41.0 31.0 41.0 36 36.29159798189637 39.0 35.0 41.0 30.0 41.0 37 36.18664126683731 39.0 35.0 41.0 30.0 41.0 38 36.12783322074445 39.0 35.0 41.0 30.0 41.0 39 36.091379412311035 39.0 35.0 41.0 30.0 41.0 40 36.05214600514938 39.0 35.0 41.0 30.0 41.0 41 35.99407846348247 39.0 35.0 41.0 30.0 41.0 42 35.925272358194235 39.0 35.0 41.0 29.0 41.0 43 35.81016681757186 39.0 35.0 41.0 29.0 41.0 44 35.702257247405946 39.0 35.0 40.0 28.0 41.0 45 35.63038250510398 38.0 35.0 40.0 28.0 41.0 46 35.52710587713957 38.0 35.0 40.0 27.0 41.0 47 35.38297406235397 38.0 35.0 40.0 26.0 41.0 48 35.356084339206 38.0 35.0 40.0 26.0 41.0 49 35.299414510055115 38.0 35.0 40.0 26.0 41.0 50 35.200665870909006 38.0 35.0 40.0 26.0 41.0 51 34.76968646426212 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 1.0 14 5.0 15 16.0 16 32.0 17 98.0 18 190.0 19 364.0 20 707.0 21 1145.0 22 1885.0 23 3239.0 24 5656.0 25 11092.0 26 17365.0 27 20503.0 28 19474.0 29 18392.0 30 19686.0 31 22463.0 32 27232.0 33 36605.0 34 65321.0 35 113471.0 36 108173.0 37 92534.0 38 165420.0 39 449388.0 40 74.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.301040454531446 19.805453077924557 26.136807567971893 26.756698899572108 2 33.19292347648919 19.23853821594242 27.457887454988743 20.110650852579646 3 20.998090015018327 21.75367107776296 38.35946200562583 18.888776901592877 4 22.596463404171313 24.27713357317125 35.868068599530375 17.25833442312706 5 20.191281705709045 29.417017274827096 31.26544626428428 19.126254755179577 6 73.07470931661187 1.6370228890001357 21.273384405093402 4.014883389294589 7 74.25285269126296 1.4548538024360846 17.335550126485487 6.956743379815465 8 61.44004371391707 3.5085249634953812 25.591466456982026 9.459964865605528 9 35.55095944884481 16.847183709235814 28.782299195440693 18.81955764647869 10 27.574335732545464 19.671012791818303 40.906830549430964 11.847820926205276 11 24.169931188896932 16.34540658190987 40.28918821889944 19.19547401029376 12 19.747812013497338 19.73515097044396 42.162606109119864 18.354430906938834 13 14.33813147993433 23.044264505848652 41.82300694774737 20.794597066469645 14 12.778657479636129 22.788794643712418 42.64747408026268 21.785073796388772 15 14.021355514592267 18.11620338632924 46.871931050625015 20.99051004845348 16 14.82516515580996 25.221630725686005 37.72057910944556 22.232625009058477 17 16.359067180993776 21.776660866465143 40.177571128823615 21.686700823717466 18 18.117952609382666 27.516528075446487 38.47899224761002 15.886527067560824 19 17.19952720999756 23.329054678213758 35.88681027510281 23.584607836685873 20 14.632833916268856 29.355711171621273 34.780968119993375 21.2304867921165 21 15.157934017640498 23.73870605805921 36.79590648486964 24.307453439430653 22 13.427869121465216 26.796181362778032 32.40035884061496 27.375590675141794 23 13.474265180548972 23.265666166610995 42.844719803620556 20.415348849219473 24 18.039320868314324 21.703859868908225 37.919574055856856 22.337245206920592 25 14.715047399779932 25.292515907517743 37.79937744318565 22.193059249516672 26 16.928980711067503 21.5426814589853 37.00631302929616 24.522024800651042 27 21.825972297304613 21.5082800722679 38.300904681503965 18.36484294892352 28 15.877281174278423 21.52943734158078 36.08263996075077 26.510641523390028 29 22.229626340966888 21.504198551809907 34.046627622897496 22.219547484325712 30 22.066032337303515 20.05076078708374 36.1960895702159 21.687117305396853 31 22.127421736845218 20.01560973334344 32.43509341267587 25.42187511713547 32 19.71599281319214 20.47099080158563 39.562344392032536 20.25067199318969 33 20.934368318072057 18.610483843426213 37.710750141812014 22.74439769668972 34 16.194723510307504 17.585189245110296 43.7038382118609 22.5162490327213 35 20.588521931508755 22.439449811042262 37.293268906394076 19.678759351054907 36 19.67775979502438 19.84993332128313 41.87639989904484 18.59590698464765 37 17.669901618697693 23.065505071497412 41.851494294617474 17.413099015187424 38 16.090769683132407 24.010002224012165 38.42701533402247 21.47221275883295 39 22.39055486188218 21.05006692860588 39.735350881650064 16.824027327861874 40 16.52399392603119 18.87744859991354 43.57706118865538 21.021496285399902 41 19.16115591991224 22.232291823714966 34.73873687770349 23.867815378669306 42 19.011139218996895 17.749283026788934 40.51800325355488 22.72157450065929 43 23.340549572564854 19.947556626931537 36.13453357800244 20.577360222501174 44 17.313726486485585 22.303843376233722 37.46044465250018 22.92198548478051 45 19.724239150444014 20.322889916395468 37.037715747921965 22.915155185238557 46 23.08766189684082 18.905352872432495 36.37109517189449 21.635890058832203 47 16.66743021641221 17.84174195961294 41.06975818240731 24.421069641567534 48 18.32844245014506 15.647299990920699 36.24081970258211 29.783437856352137 49 20.24284213761721 16.204302588933412 40.37340081447157 23.179454458977805 50 18.661960978998497 15.912348931682843 40.82636628897332 24.599323800345346 51 16.695917563282308 15.28154578008268 39.184428916156406 28.838107740478602 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 279.0 1 1821.0 2 3363.0 3 37678.0 4 71993.0 5 40964.0 6 9935.0 7 9336.5 8 8738.0 9 9056.0 10 9374.0 11 9464.5 12 9555.0 13 9020.5 14 8486.0 15 7836.0 16 7186.0 17 6521.0 18 5856.0 19 5331.0 20 4806.0 21 4374.5 22 3943.0 23 3607.5 24 3272.0 25 3281.0 26 3598.0 27 3906.0 28 4232.5 29 4559.0 30 6045.5 31 7532.0 32 8722.5 33 9913.0 34 12953.0 35 15993.0 36 18198.0 37 20403.0 38 24381.0 39 28359.0 40 35713.5 41 43068.0 42 56603.0 43 70138.0 44 101527.0 45 132916.0 46 164105.0 47 195294.0 48 191398.5 49 187503.0 50 152212.5 51 116922.0 52 94735.0 53 72548.0 54 58919.5 55 45291.0 56 38798.0 57 32305.0 58 28040.0 59 23775.0 60 19673.5 61 15572.0 62 12215.5 63 8859.0 64 7333.5 65 5808.0 66 4421.0 67 3034.0 68 2691.5 69 2349.0 70 1933.5 71 1518.0 72 1367.0 73 1216.0 74 1005.0 75 630.0 76 466.0 77 361.5 78 257.0 79 176.5 80 96.0 81 63.0 82 30.0 83 19.0 84 8.0 85 11.5 86 15.0 87 9.0 88 3.0 89 3.0 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 1.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1200533.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.38157449107936 #Duplication Level Percentage of deduplicated Percentage of total 1 71.63607123614804 21.764166345092995 2 12.379133091923219 7.521951083345016 3 5.043107944267506 4.59652679025952 4 2.70333878909446 3.2852675518199046 5 1.6441113547855168 2.497534579852279 6 0.9829863391535743 1.7918803612024625 7 0.6905853711748768 1.468674962775945 8 0.5132005753286628 1.2473473206570045 9 0.4018488256265608 1.0987920026933506 >10 3.3337735334644742 21.950753368989844 >50 0.4629981935980627 9.48101780340343 >100 0.19199351597727554 11.080809787633381 >500 0.010497487203193722 2.1378394171676125 >1k 0.005248743601596861 2.8326036561481986 >5k 8.287489897258201E-4 1.9682189137875974 >10k+ 2.7624966324194005E-4 5.276616055171474 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 62870 5.236840636617235 No Hit CCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC 8814 0.7341739044241182 No Hit CTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGCT 8551 0.7122669680883408 No Hit GCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC 6086 0.5069415001503499 No Hit CGCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTG 3932 0.32752119267025565 No Hit TCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC 3167 0.2637994957239826 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCC 3021 0.2516382306858704 No Hit GCCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTG 2354 0.19607957465559048 No Hit ACCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTG 2178 0.1814194195411538 No Hit AGCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTG 1901 0.15834633450309155 No Hit CGTTCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTC 1892 0.1575966674801942 No Hit TCCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTG 1691 0.1408541039688205 No Hit ACTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC 1574 0.1311084326711552 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTC 1321 0.11003445969415251 No Hit TGCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTG 1311 0.1092014963353777 No Hit TGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGCTT 1273 0.10603623557203343 Illumina Single End Adapter 1 (95% over 21bp) ATCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTG 1214 0.10112175175526203 No Hit CGTCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCT 1202 0.10012219572473227 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.7376723505309725 0.0 2 0.0 0.0 0.0 2.4255060044163717 0.0 3 0.0 0.0 0.0 4.030792989447187 0.0 4 0.0 0.0 0.0 5.016438531885421 0.0 5 0.0 0.0 0.0 10.168983276594647 0.0 6 0.0 0.0 0.0 11.415096461321763 0.0 7 0.0 0.0 0.0 15.403491615807312 0.0 8 0.0 0.0 0.0 20.417764442959918 0.0 9 0.0 0.0 0.0 24.02974345561513 0.0 10 0.0 0.0 0.0 26.41301821774162 0.0 11 0.0 0.0 0.0 28.48509786902984 0.0 12 0.0 0.0 0.0 29.903134691008077 0.0 13 0.0 0.0 0.0 30.5359369546693 0.0 14 0.0 0.0 0.0 30.988236058484024 0.0 15 0.0 0.0 0.0 32.433843967637706 0.0 16 0.0 0.0 0.0 34.12809143938567 0.0 17 0.0 0.0 0.0 35.90896710044622 0.0 18 0.0 0.0 0.0 36.9240162494492 0.0 19 0.0 0.0 0.0 37.95489170226891 0.0 20 0.0 0.0 0.0 39.15627475462982 0.0 21 0.0 0.0 0.0 40.3566582509602 0.0 22 6.663706870198487E-4 0.0 0.0 41.4904046785886 0.0 23 7.496670228973297E-4 0.0 0.0 42.36168435186705 0.0 24 0.002582186412201914 0.0 0.0 43.15316613537487 0.0 25 0.002582186412201914 0.0 0.0 43.90341623262334 0.0 26 0.002582186412201914 0.0 0.0 44.68623519719991 0.0 27 0.002582186412201914 0.0 0.0 45.40699839154775 0.0 28 0.002582186412201914 0.0 0.0 46.114767357498714 0.0 29 0.002582186412201914 0.0 0.0 46.93098815276215 0.0 30 0.002582186412201914 0.0 0.0 47.64133930512531 0.0 31 0.002582186412201914 0.0 0.0 48.330533188175586 0.0 32 0.002582186412201914 0.0 0.0 48.99098983534813 0.0 33 0.002582186412201914 0.0 0.0 49.66185852450536 0.0 34 0.002582186412201914 0.0 0.0 50.39020168541806 0.0 35 0.002582186412201914 0.0 0.0 50.97294285121692 0.0 36 0.002582186412201914 0.0 0.0 51.54502208602346 0.0 37 0.002582186412201914 0.0 0.0 52.14783766876879 0.0 38 0.002582186412201914 0.0 0.0 52.74199043258286 0.0 39 0.002582186412201914 0.0 0.0 53.32089996693136 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATATCGG 35 1.2119926E-7 45.000004 1 TCATCGG 70 0.0 45.000004 1 AATCGGT 70 0.0 45.000004 12 CGAACTC 20 7.0334127E-4 45.0 30 GATCGCC 20 7.0334127E-4 45.0 8 CGACGGC 25 3.89091E-5 45.0 2 CATGCGA 20 7.0334127E-4 45.0 23 CGCGGAA 20 7.0334127E-4 45.0 3 TTAGCGA 20 7.0334127E-4 45.0 39 GCGAACT 20 7.0334127E-4 45.0 29 GACACCG 45 3.8562575E-10 45.0 31 CGGCCAC 20 7.0334127E-4 45.0 22 GGCGTAT 20 7.0334127E-4 45.0 7 TTCGTCC 20 7.0334127E-4 45.0 43 GTTAGCG 20 7.0334127E-4 45.0 38 TGCGGTA 20 7.0334127E-4 45.0 3 TACGGAA 20 7.0334127E-4 45.0 3 CCGTCGC 40 6.8157533E-9 45.0 29 CCCGTCG 40 6.8157533E-9 45.0 28 ACGGCTC 40 6.8157533E-9 45.0 4 >>END_MODULE