##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043205_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1278993 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.20330916588285 33.0 31.0 34.0 30.0 34.0 2 32.49321614739095 34.0 31.0 34.0 31.0 34.0 3 32.580443364428106 34.0 31.0 34.0 31.0 34.0 4 36.13607580338594 37.0 35.0 37.0 35.0 37.0 5 36.088722924988645 37.0 35.0 37.0 35.0 37.0 6 36.330252784808046 37.0 37.0 37.0 35.0 37.0 7 36.26571763879865 37.0 37.0 37.0 35.0 37.0 8 36.16213302183827 37.0 37.0 37.0 35.0 37.0 9 37.68592322241013 39.0 38.0 39.0 35.0 39.0 10 37.46127304840605 39.0 37.0 39.0 35.0 39.0 11 37.2774698532361 39.0 37.0 39.0 34.0 39.0 12 37.30402277416687 39.0 37.0 39.0 34.0 39.0 13 37.318703073433554 39.0 37.0 39.0 34.0 39.0 14 38.69472155046979 40.0 38.0 41.0 35.0 41.0 15 38.78503244349265 40.0 38.0 41.0 35.0 41.0 16 38.834937329602276 40.0 38.0 41.0 35.0 41.0 17 38.78120755938461 40.0 38.0 41.0 35.0 41.0 18 38.579716229877725 40.0 38.0 41.0 35.0 41.0 19 38.368679891133105 40.0 37.0 41.0 35.0 41.0 20 38.09849780256811 40.0 35.0 41.0 34.0 41.0 21 38.045833714492574 40.0 35.0 41.0 34.0 41.0 22 38.008481672690934 40.0 35.0 41.0 34.0 41.0 23 37.96192160551309 40.0 35.0 41.0 34.0 41.0 24 37.90050610128437 40.0 35.0 41.0 34.0 41.0 25 37.89370778417083 40.0 35.0 41.0 34.0 41.0 26 37.848485488192665 40.0 35.0 41.0 34.0 41.0 27 37.86638238051342 40.0 35.0 41.0 34.0 41.0 28 37.81467607719511 40.0 35.0 41.0 34.0 41.0 29 37.785955044320026 40.0 35.0 41.0 34.0 41.0 30 37.688920111368866 40.0 35.0 41.0 34.0 41.0 31 37.53345014398046 40.0 35.0 41.0 33.0 41.0 32 37.315415330654666 40.0 35.0 41.0 33.0 41.0 33 37.02921204416287 40.0 35.0 41.0 32.0 41.0 34 36.77807462589709 40.0 35.0 41.0 31.0 41.0 35 36.62788459358261 40.0 35.0 41.0 31.0 41.0 36 36.548246159283124 40.0 35.0 41.0 31.0 41.0 37 36.4300938316316 40.0 35.0 41.0 30.0 41.0 38 36.339136336164465 39.0 35.0 41.0 30.0 41.0 39 36.25254712105539 39.0 35.0 41.0 30.0 41.0 40 36.174424723200204 39.0 35.0 41.0 30.0 41.0 41 36.13070126263396 39.0 35.0 41.0 30.0 41.0 42 36.05583846041378 39.0 35.0 41.0 30.0 41.0 43 35.945823784805704 39.0 35.0 41.0 29.0 41.0 44 35.84082633759528 39.0 35.0 41.0 28.0 41.0 45 35.75750453677229 39.0 35.0 41.0 28.0 41.0 46 35.65181513894134 39.0 35.0 40.0 27.0 41.0 47 35.5240802725269 38.0 35.0 40.0 27.0 41.0 48 35.5061489781414 38.0 35.0 40.0 27.0 41.0 49 35.42221419507378 38.0 35.0 40.0 27.0 41.0 50 35.30168421562902 38.0 35.0 40.0 26.0 41.0 51 34.88846146929655 38.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 1.0 14 4.0 15 13.0 16 30.0 17 70.0 18 182.0 19 372.0 20 730.0 21 1166.0 22 2019.0 23 3389.0 24 5943.0 25 11355.0 26 18045.0 27 20888.0 28 19894.0 29 19125.0 30 20301.0 31 23252.0 32 28252.0 33 36616.0 34 66625.0 35 110760.0 36 104953.0 37 102178.0 38 183526.0 39 499184.0 40 119.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.882638919837717 20.577438656818295 26.360973046764137 25.178949376579858 2 32.384149092293704 20.93045075305338 26.12641351438202 20.558986640270902 3 22.02482734463754 22.207471033852414 35.411061671174124 20.35663995033593 4 22.991290804562652 24.990128953012253 32.900336436555946 19.11824380586915 5 20.964461885248788 31.114009224444544 29.13260666790201 18.788922222404658 6 77.27016488753262 1.5361303775704793 17.940442207267747 3.2532625276291585 7 77.98408591759298 1.3884360586805402 14.84417819331302 5.783299830413458 8 67.2303132229809 3.4998627826735564 21.708171975921683 7.56165201842387 9 34.28619234038028 25.093178774238794 24.714130569909294 15.906498315471627 10 24.187388046689858 20.337171509148213 42.291083688495554 13.184356755666371 11 23.010681059239573 17.700722365173228 38.95752361428092 20.33107296130628 12 19.2303632623478 21.48784238850408 41.47419102371944 17.80760332542868 13 15.190778995662994 24.165261264135143 40.656125561281414 19.987834178920448 14 14.05801282727896 23.8497786930812 42.1987454192478 19.89346306039204 15 14.595075969923213 20.997769338847046 44.36419902219949 20.042955669030242 16 15.834410352519521 24.418898305151004 37.43609230073972 22.31059904158975 17 16.26396704282197 21.861417537077998 39.89099236665095 21.98362305344908 18 18.09595517723709 27.1194603879771 38.050794648602455 16.733789786183348 19 18.18977899018994 23.924524997400297 35.48221139599669 22.40348461641307 20 15.555597255027978 28.747694475262957 35.26626025318356 20.430448016525503 21 16.185311412963166 23.14054885366847 36.35586746760928 24.318272265759077 22 14.263956096710459 25.388254665975495 34.03388447004792 26.313904767266123 23 13.64276426845182 22.56517432073514 41.969502569599676 21.82255884121336 24 17.414168803113075 22.459231598609218 37.66932266243834 22.457276935839367 25 14.295856193114426 25.675199160589617 37.04594161187747 22.983003034418484 26 15.808843363489872 22.56845815418849 36.401450203402206 25.221248278919433 27 20.135841243853562 22.456964189796192 36.868067299821035 20.539127266529214 28 16.360058264587842 21.946484460821914 34.782285751368455 26.911171523221782 29 17.24395676911445 22.373617369289747 33.314803130275145 27.067622731320657 30 22.49433734195574 23.341175440365973 31.01729251059232 23.147194707085966 31 18.37719205656325 23.594421548827867 30.394146019563827 27.634240375045056 32 18.190482668787084 23.79520450854696 32.99032911047989 25.02398371218607 33 17.00517516514946 24.970582325313742 31.800564975726996 26.223677533809802 34 16.142074272494064 24.433753742201873 34.07188311429382 25.35228887101024 35 17.526679192145696 27.134941317114325 32.96828051443597 22.370098976304014 36 16.492115281318974 28.06152965653448 34.964851254072535 20.48150380807401 37 15.491406129666075 30.791646240440723 34.55398113984987 19.16296649004334 38 14.712433922625065 29.18092593157273 33.628721971113215 22.477918174688995 39 19.37391369616566 25.337198874426992 35.64624669564259 19.642640733764765 40 15.362163827323528 23.10043917363113 38.011310460651465 23.52608653839388 41 18.925435870251047 24.537194495982387 30.995009355016016 25.542360278750547 42 19.207767360728322 19.860859285390926 36.18190248109255 24.7494708727882 43 20.845383829309462 22.482609365336636 33.861326840725475 22.81067996462842 44 16.28937765883003 25.450569315078347 33.75038018190873 24.509672844182884 45 18.42332209793173 25.146814720643505 32.433172034561565 23.996691146863196 46 21.140850653600136 22.873620105817626 32.397518985639486 23.588010254942755 47 16.76694086676002 21.65234680721474 36.731397278953054 24.84931504707219 48 17.762724268232898 19.468363001204857 33.108312555268085 29.660600175294157 49 19.02363812780836 20.187366154466837 36.47361635286511 24.315379364859698 50 18.269294671667478 19.637167678009185 36.76423561348655 25.329302036836793 51 16.45935513329627 19.04959604939198 35.85633385014617 28.634714967165575 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 320.0 1 1565.0 2 2810.0 3 32564.0 4 62318.0 5 35771.5 6 9225.0 7 8742.0 8 8259.0 9 8412.5 10 8566.0 11 8672.0 12 8778.0 13 8395.5 14 8013.0 15 7533.0 16 7053.0 17 6728.5 18 6404.0 19 5888.0 20 5372.0 21 5311.0 22 5250.0 23 4963.0 24 4676.0 25 5138.5 26 6449.5 27 7298.0 28 8159.0 29 9020.0 30 10920.0 31 12820.0 32 14661.0 33 16502.0 34 20753.0 35 25004.0 36 27365.5 37 29727.0 38 33946.0 39 38165.0 40 45654.0 41 53143.0 42 67068.0 43 80993.0 44 107392.0 45 133791.0 46 161256.0 47 188721.0 48 185269.5 49 181818.0 50 149454.5 51 117091.0 52 95287.5 53 73484.0 54 61503.5 55 49523.0 56 42345.0 57 35167.0 58 30861.0 59 26555.0 60 22168.5 61 17782.0 62 14986.5 63 12191.0 64 10534.0 65 8877.0 66 7361.5 67 5846.0 68 4680.0 69 3514.0 70 3185.0 71 2856.0 72 2685.5 73 2515.0 74 2166.0 75 1499.5 76 1182.0 77 810.5 78 439.0 79 370.5 80 302.0 81 207.0 82 112.0 83 75.5 84 39.0 85 42.0 86 45.0 87 24.0 88 3.0 89 3.0 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 1.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1278993.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.756306040257993 #Duplication Level Percentage of deduplicated Percentage of total 1 71.63843789203816 22.74972157945578 2 12.3996609975253 7.875348588657283 3 5.006622907620718 4.769755478477096 4 2.557846386182379 3.2491101057430223 5 1.4810186093807731 2.3515840105406567 6 0.993585822877249 1.893156928113089 7 0.7173144011736258 1.594547895552784 8 0.5151020842099002 1.3086191542515468 9 0.3970085704596259 1.1346773097709089 >10 3.6835706534117634 25.6330125690969 >50 0.44284159449439675 9.344571896819696 >100 0.15406822918402918 8.845494631035047 >500 0.00894589715221684 1.9898042370923363 >1k 0.002981965717405613 1.6616029354041735 >5k 7.454914293514032E-4 1.4602156495402177 >10k+ 2.4849714311713444E-4 4.138777030449406 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 52447 4.10064793161495 No Hit CCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGC 6742 0.5271334557734092 No Hit CTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGCT 6616 0.5172819554133604 No Hit GCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGC 5146 0.4023477845461234 No Hit CGCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTG 2838 0.22189331763348197 No Hit TCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGC 2701 0.21118176565469868 No Hit ACCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTG 2139 0.1672409465884489 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCC 2068 0.16168970432207214 No Hit GCCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTG 1831 0.14315950126388496 No Hit AGCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTG 1715 0.13408986601177647 No Hit ACTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGC 1544 0.12071997266599582 No Hit TCCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTG 1374 0.10742826583100924 No Hit CGTTCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTC 1320 0.10320619424813114 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5319810194426396 0.0 2 0.0 0.0 0.0 1.8359756464656178 0.0 3 0.0 0.0 0.0 3.097358625105845 0.0 4 0.0 0.0 0.0 3.9240246037312168 0.0 5 0.0 0.0 0.0 7.995821712863167 0.0 6 0.0 0.0 0.0 8.961581494191133 0.0 7 0.0 0.0 0.0 12.25448458279287 0.0 8 0.0 0.0 0.0 16.246453264404106 0.0 9 0.0 0.0 0.0 19.388612760194935 0.0 10 0.0 0.0 0.0 21.381899666378157 0.0 11 0.0 0.0 0.0 23.287774053493646 0.0 12 0.0 0.0 0.0 24.60771872871861 0.0 13 0.0 0.0 0.0 25.197088647084072 0.0 14 0.0 0.0 0.0 25.627583575516052 0.0 15 0.0 0.0 0.0 27.010077459376244 0.0 16 0.0 0.0 0.0 28.686239877778846 0.0 17 0.0 0.0 0.0 30.519322623345086 0.0 18 0.0 0.0 0.0 31.584692019424658 0.0 19 0.0 0.0 0.0 32.6635876818716 0.0 20 3.12746043176155E-4 0.0 0.0 33.900732842165674 0.0 21 3.12746043176155E-4 0.0 0.0 35.1700126583961 0.0 22 4.691190647642325E-4 0.0 0.0 36.411692636316225 0.0 23 4.691190647642325E-4 0.0 0.0 37.37010288562956 0.0 24 6.2549208635231E-4 0.0 0.0 38.16494695436175 0.0 25 6.2549208635231E-4 0.0 0.0 38.92789092668998 0.0 26 6.2549208635231E-4 0.0 0.0 39.70451753840717 0.0 27 7.036785971463488E-4 0.0 0.0 40.45612446667026 0.0 28 7.036785971463488E-4 0.0 0.0 41.23814594763224 0.0 29 7.036785971463488E-4 0.0 0.0 42.12079346798614 0.0 30 7.036785971463488E-4 0.0 0.0 42.90805344517132 0.0 31 7.036785971463488E-4 0.0 0.0 43.609777379547815 0.0 32 7.036785971463488E-4 0.0 0.0 44.29187649971501 0.0 33 7.036785971463488E-4 0.0 0.0 44.968737123659004 0.0 34 7.036785971463488E-4 0.0 0.0 45.7438781916711 0.0 35 7.036785971463488E-4 0.0 0.0 46.41933145842081 0.0 36 7.036785971463488E-4 0.0 0.0 47.090484467076834 0.0 37 7.036785971463488E-4 0.0 0.0 47.75405338418584 0.0 38 7.036785971463488E-4 0.0 0.0 48.41707499571929 0.0 39 7.036785971463488E-4 0.0 0.0 49.07188702361936 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACGG 55 1.8189894E-12 45.000004 1 CTAGCGG 270 0.0 45.000004 1 TGATCGG 20 7.033585E-4 45.0 1 TCGCATC 20 7.033585E-4 45.0 43 CGTGCCG 20 7.033585E-4 45.0 40 CGGTTGC 20 7.033585E-4 45.0 41 TAACCGG 20 7.033585E-4 45.0 1 GTCGTTG 35 1.2120654E-7 45.0 23 ACGTCAG 20 7.033585E-4 45.0 10 CGTCGAG 20 7.033585E-4 45.0 21 AGTACGG 80 0.0 45.0 1 CGGACTA 20 7.033585E-4 45.0 28 ACGGATG 25 3.8910544E-5 44.999996 4 ACGTCCG 25 3.8910544E-5 44.999996 39 ACCGTTT 25 3.8910544E-5 44.999996 43 TGGGACG 25 3.8910544E-5 44.999996 5 CGTTTTT 13425 0.0 44.513966 1 ATAGCGG 145 0.0 43.448273 1 TACGCGG 140 0.0 43.392857 1 GACGGTC 140 0.0 43.392857 28 >>END_MODULE