##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043199_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2415014 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.30949385800662 33.0 31.0 34.0 31.0 34.0 2 32.601322808066534 34.0 31.0 34.0 31.0 34.0 3 32.6819347631111 34.0 31.0 34.0 31.0 34.0 4 36.18646061679146 37.0 37.0 37.0 35.0 37.0 5 36.16165703387227 37.0 37.0 37.0 35.0 37.0 6 36.335542568283245 37.0 37.0 37.0 35.0 37.0 7 36.28752876794917 37.0 37.0 37.0 35.0 37.0 8 36.19756738470253 37.0 37.0 37.0 35.0 37.0 9 37.799442156442986 39.0 38.0 39.0 35.0 39.0 10 37.576960216379696 39.0 37.0 39.0 35.0 39.0 11 37.17914430309721 39.0 35.0 39.0 34.0 39.0 12 37.16877334872593 39.0 35.0 39.0 34.0 39.0 13 37.162214380537755 39.0 35.0 39.0 34.0 39.0 14 38.432976786055896 40.0 37.0 41.0 34.0 41.0 15 38.49024105036244 40.0 37.0 41.0 35.0 41.0 16 38.36987156182117 40.0 37.0 41.0 34.0 41.0 17 38.29480118955832 40.0 37.0 41.0 34.0 41.0 18 38.1342559504831 40.0 37.0 41.0 34.0 41.0 19 37.922104799392464 39.0 36.0 41.0 34.0 41.0 20 37.64452669839595 39.0 35.0 41.0 34.0 41.0 21 37.569081173028394 39.0 35.0 41.0 34.0 41.0 22 37.54538524414351 39.0 35.0 41.0 34.0 41.0 23 37.533574546565774 39.0 35.0 41.0 34.0 41.0 24 37.456259880895104 39.0 35.0 41.0 34.0 41.0 25 37.414678755485475 39.0 35.0 41.0 34.0 41.0 26 37.392696688300774 39.0 35.0 41.0 34.0 41.0 27 37.369486056809606 39.0 35.0 41.0 34.0 41.0 28 37.265847320139756 39.0 35.0 41.0 34.0 41.0 29 37.19705020343567 39.0 35.0 41.0 33.0 41.0 30 37.080099742693 39.0 35.0 41.0 33.0 41.0 31 36.938584621041535 39.0 35.0 41.0 33.0 41.0 32 36.664535278056356 39.0 35.0 41.0 32.0 41.0 33 36.239684324811364 38.0 35.0 41.0 31.0 41.0 34 35.864380910421225 38.0 35.0 41.0 30.0 41.0 35 35.72783014922481 38.0 35.0 41.0 29.0 41.0 36 35.64999167706688 38.0 35.0 41.0 29.0 41.0 37 35.53563788864164 38.0 35.0 41.0 29.0 41.0 38 35.429959826319845 38.0 35.0 40.0 29.0 41.0 39 35.40123908184383 38.0 35.0 40.0 29.0 41.0 40 35.36666578330395 37.0 35.0 40.0 28.0 41.0 41 35.299251681356715 37.0 35.0 40.0 28.0 41.0 42 35.209229014821446 37.0 35.0 40.0 27.0 41.0 43 35.09038125658899 37.0 35.0 40.0 27.0 41.0 44 34.953353479524345 37.0 35.0 40.0 26.0 41.0 45 34.89156004892725 36.0 35.0 40.0 25.0 41.0 46 34.7976065563181 36.0 35.0 40.0 25.0 41.0 47 34.674616379035484 36.0 35.0 40.0 24.0 41.0 48 34.60335964926083 36.0 35.0 40.0 24.0 41.0 49 34.53312113304519 35.0 34.0 40.0 25.0 41.0 50 34.46687845287853 35.0 34.0 40.0 24.0 41.0 51 34.04464901652744 35.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 4.0 14 13.0 15 48.0 16 108.0 17 237.0 18 466.0 19 926.0 20 1801.0 21 2941.0 22 4603.0 23 7217.0 24 11816.0 25 21066.0 26 33844.0 27 42679.0 28 45061.0 29 45149.0 30 47466.0 31 52664.0 32 59993.0 33 79154.0 34 191197.0 35 255902.0 36 222687.0 37 216624.0 38 337506.0 39 733700.0 40 139.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.787410756210935 16.94892866045497 23.221438881927806 31.042221701406287 2 36.06604350947862 18.7829138878698 24.013939463704972 21.137103138946607 3 25.36622976098689 20.51996385942276 34.739922832745485 19.373883546844866 4 22.971005551106536 22.868563080793734 32.98208623221232 21.17834513588741 5 21.136440616907397 30.23999032717823 30.15750633329662 18.466062722617757 6 76.4520205679967 1.8442129113951304 18.63657933245936 3.0671871881488055 7 76.318895045743 1.7635508531213484 16.938411123082517 4.979142978053129 8 67.04946637990504 3.003460849502322 22.52897912807131 7.418093642521327 9 42.65714401655642 13.651390840798438 26.406016693899083 17.285448448746052 10 31.214684469738064 14.926041836610471 35.40451525332772 18.45475844032374 11 28.157724965569557 11.818109543050268 38.93770388080566 21.086461610574514 12 22.790840964068945 12.957399004726266 41.716735389525695 22.535024641679097 13 16.977541331023343 15.620986048114007 44.48119141338311 22.920281207479544 14 18.346394679285503 15.94392413460129 44.350964425050954 21.358716761062254 15 23.020032182008055 13.948821828776147 42.574038908263056 20.457107080952742 16 21.000457968359605 17.908674649505137 40.476701170262366 20.61416621187289 17 21.374078990846428 18.918772313535243 40.05720049656027 19.64994819905806 18 21.440828086296808 26.48692719793757 35.092674410997205 16.97957030476842 19 22.345667561347472 22.909639447224738 33.453843331757085 21.29084965967071 20 21.64695525574593 26.784151147778022 33.417860103502505 18.15103349297354 21 18.563287831871783 21.2426511813182 36.31109384873131 23.882967138078705 22 20.731142759420855 21.473291666218085 34.37064961114097 23.424915963220087 23 22.84007463310772 19.22485749565013 35.99254497075379 21.942522900488363 24 24.013898056077522 17.547682953390748 33.677113258970756 24.761305731560977 25 17.515674857371426 18.570368536165834 37.854024862795825 26.05993174366691 26 17.323957542275117 17.823664790349042 37.29510470746754 27.557272959908307 27 21.089981258907816 21.261201798416078 35.026546429958586 22.622270512717524 28 23.698537565413698 22.29436351093617 31.07795648389616 22.92914243975397 29 23.547979432003295 21.18849000461281 33.52249717807019 21.741033385313706 30 26.576947380015188 18.46150788359819 30.97559682883826 23.985947907548365 31 29.386123641519262 19.102580771788485 29.473410920185138 22.03788466650711 32 25.67330872616059 21.635236897177407 28.295322511587923 24.396131865074075 33 24.11062627380214 21.11138900229978 32.0285927949072 22.74939192899089 34 21.99142530850753 23.620318557159504 32.593931132490326 21.79432500184264 35 24.449340666348103 26.957856144933324 27.95391662325767 20.638886565460904 36 25.303041721497266 24.524329879661153 30.167651202022018 20.004977196819564 37 24.27224024374186 24.172406453958445 31.401101608520698 20.154251693779003 38 21.547452726982122 20.448701332580267 32.52494602515762 25.478899915279996 39 22.556763646090662 17.805652472408028 35.891551767401765 23.746032114099545 40 18.553929708067944 18.292150687325208 37.69514379626785 25.458775808339002 41 19.868207803350206 21.64844593033415 31.904369912555374 26.578976353760268 42 19.591314998588 16.990957402317335 33.772433617362054 29.645293981732614 43 22.77614125632398 18.4142203730496 33.713634786382194 25.09600358424423 44 21.93424137499824 19.992761946721636 34.232803619357895 23.840193058922228 45 22.831213400833285 20.77963109116552 33.10813105017197 23.28102445782923 46 22.299539464367495 19.747131900684632 32.98974664329068 24.96358199165719 47 20.320544725620636 19.02075929994609 34.92849316815555 25.73020280627773 48 22.339994716386737 17.42548904478401 32.74602134811641 27.48849489071285 49 21.64430516758909 16.435556895322346 35.67167726563904 26.248460671449525 50 20.178392340582704 16.178912420383483 37.87700609603091 25.765689143002895 51 18.15389061926763 15.106247831275512 37.73891165848314 29.000949890973715 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 444.0 1 3408.5 2 6373.0 3 84321.0 4 162269.0 5 92508.0 6 22747.0 7 20156.5 8 17566.0 9 16919.5 10 16273.0 11 15796.0 12 15319.0 13 14679.0 14 14039.0 15 12943.5 16 11848.0 17 10992.5 18 10137.0 19 9400.5 20 8664.0 21 8587.0 22 8510.0 23 8033.0 24 7556.0 25 7729.5 26 8070.5 27 8238.0 28 9192.0 29 10146.0 30 11557.5 31 12969.0 32 14646.0 33 16323.0 34 19045.0 35 21767.0 36 23638.5 37 25510.0 38 27104.0 39 28698.0 40 33725.5 41 38753.0 42 46423.5 43 54094.0 44 66330.0 45 78566.0 46 111036.5 47 143507.0 48 189305.5 49 235104.0 50 253295.0 51 271486.0 52 240026.0 53 208566.0 54 184889.5 55 161213.0 56 147030.5 57 132848.0 58 127457.5 59 122067.0 60 121891.5 61 121716.0 62 120026.0 63 118336.0 64 111796.0 65 105256.0 66 85149.5 67 65043.0 68 52038.0 69 39033.0 70 33316.5 71 27600.0 72 25314.5 73 23029.0 74 19630.0 75 12935.0 76 9639.0 77 7129.0 78 4619.0 79 3708.5 80 2798.0 81 2038.5 82 1279.0 83 912.5 84 546.0 85 379.5 86 213.0 87 143.5 88 74.0 89 67.0 90 60.0 91 43.0 92 26.0 93 18.0 94 10.0 95 6.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2415014.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.197534213177057 #Duplication Level Percentage of deduplicated Percentage of total 1 73.68900929055663 21.515373698961486 2 10.386711547373958 6.065327315337047 3 3.896353661933389 3.4129175805281347 4 2.1070233130616285 2.4607954108431427 5 1.275269358760922 1.8617360366719193 6 0.9290457343840341 1.6275506769170427 7 0.7127300259206903 1.456697152160455 8 0.6195818741731833 1.4472210375228707 9 0.5171398609395276 1.3589287904501532 >10 5.337123783303753 31.867924842104188 >50 0.3387821246216555 6.6302188629298655 >100 0.1786343272438885 9.272462651075037 >500 0.006870053305454178 1.3551850504759644 >1k 0.004866287758030043 2.8909416450361327 >5k 5.725044421211815E-4 1.2084210461196294 >10k+ 2.8625222106059075E-4 5.568298202866904 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 120810 5.002455472307821 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 12437 0.5149866626031981 No Hit CCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGC 8517 0.35266876299681904 No Hit CTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGCT 7371 0.30521562193842355 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 7298 0.30219286513452925 No Hit CGCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTG 5731 0.23730711291942821 No Hit CGTTCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTC 4927 0.20401538044914025 No Hit GCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTCTGC 4555 0.1886117430375145 No Hit CGTTTCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTT 4291 0.17768012939055428 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCT 3292 0.13631390956739795 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 3271 0.13544434939093522 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCC 3266 0.13523731125368216 No Hit GGGCCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTC 3075 0.12732845441061624 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 2922 0.1209930874106734 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3157745669383283 0.0 2 0.0 0.0 0.0 1.0070749072262106 0.0 3 0.0 0.0 0.0 1.7220604104158403 0.0 4 0.0 0.0 0.0 2.1975441964311595 0.0 5 0.0 0.0 0.0 4.635749523605246 0.0 6 0.0 0.0 0.0 5.73238912900712 0.0 7 0.0 0.0 0.0 8.638169385353459 0.0 8 0.0 0.0 0.0 12.171937719615704 0.0 9 0.0 0.0 0.0 15.644505580505951 0.0 10 0.0 0.0 0.0 17.47335626211691 0.0 11 0.0 0.0 0.0 18.82577078228118 0.0 12 0.0 0.0 0.0 19.76452310421389 0.0 13 0.0 0.0 0.0 20.275990118483787 0.0 14 0.0 0.0 0.0 20.6078722525004 0.0 15 0.0 0.0 0.0 21.310725320847002 0.0 16 0.0 0.0 0.0 22.060410415840238 0.0 17 0.0 0.0 0.0 23.011833471772835 0.0 18 0.0 0.0 0.0 23.5929067077872 0.0 19 0.0 0.0 0.0 24.25306851223223 0.0 20 0.0 0.0 0.0 24.972567446813972 0.0 21 0.0 0.0 0.0 25.695875883121175 0.0 22 4.140762745060691E-5 0.0 0.0 26.369826427507252 0.0 23 4.140762745060691E-5 0.0 0.0 26.99267995961928 0.0 24 8.281525490121382E-5 0.0 0.0 27.513008206163608 0.0 25 8.281525490121382E-5 0.0 0.0 28.01172167117872 0.0 26 8.281525490121382E-5 0.0 0.0 28.491180589429295 0.0 27 8.281525490121382E-5 0.0 0.0 28.9896456086797 0.0 28 8.281525490121382E-5 0.0 0.0 29.46984986422439 0.0 29 8.281525490121382E-5 0.0 0.0 29.98019887255312 0.0 30 8.281525490121382E-5 0.0 0.0 30.46110705776447 0.0 31 8.281525490121382E-5 0.0 0.0 30.951331959152203 0.0 32 8.281525490121382E-5 0.0 0.0 31.491163198225767 0.0 33 8.281525490121382E-5 0.0 0.0 32.008385872711294 0.0 34 8.281525490121382E-5 0.0 0.0 32.557906496608304 0.0 35 8.281525490121382E-5 0.0 0.0 33.05902160401555 0.0 36 8.281525490121382E-5 0.0 0.0 33.57156521659916 0.0 37 8.281525490121382E-5 0.0 0.0 34.30323799365138 0.0 38 8.281525490121382E-5 0.0 0.0 35.05727088952693 0.0 39 8.281525490121382E-5 0.0 0.0 35.88215223597047 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACGAT 30 2.1664982E-6 45.000004 25 TCGAACA 20 7.034832E-4 45.0 10 CGTTTTT 30290 0.0 44.435455 1 CACGACG 295 0.0 42.711864 25 TACGCGG 290 0.0 42.672417 1 AATACGG 85 0.0 42.35294 1 TAGGGTA 630 0.0 41.785713 4 CGCACTT 3425 0.0 41.649635 34 CATATGC 980 0.0 41.32653 32 CGGTCTA 305 0.0 41.311478 30 ACTTACT 3430 0.0 40.998543 37 CACTTAC 3475 0.0 40.98561 36 CGACGGT 325 0.0 40.84615 27 TAGCATA 1010 0.0 40.767326 29 GCACTTA 3510 0.0 40.70513 35 AGGGTAA 470 0.0 40.69149 5 ACCCGCA 3585 0.0 40.606697 31 GTTGATC 1125 0.0 40.6 15 CTTACTG 3465 0.0 40.584415 38 CCGCACT 3515 0.0 40.583214 33 >>END_MODULE