SRR805451_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR805451_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	39980347
Sequences flagged as poor quality	0
Sequence length	53
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	619558	1.5496563849233225	No Hit
CAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGATCTCGTATGCCGTC	223114	0.5580591884307557	Illumina Paired End PCR Primer 2 (100% over 52bp)
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG	52310	0.13083928461151173	No Hit

Adapter graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	507520	44.445892	1
GTGGTAT	516085	43.833027	6
AGTGGTA	515960	43.74846	5
ATCAACG	519450	43.690224	11
TCAACGC	519470	43.663666	12
CAACGCA	520220	43.60839	13
GTATCAA	519125	43.594902	9
GGTATCA	518935	43.585506	8
TGGTATC	519075	43.55564	7
TATCAAC	520405	43.475933	10
AACGCAG	522925	43.412025	14
ACGCAGA	522965	43.392525	15
CGCAGAG	524320	43.270077	16
AGAGTAC	520235	43.16445	19
AGCAGTG	524965	43.114853	2
GCAGTGG	525975	43.092823	3
CAGTGGT	526120	42.92551	4
CAGAGTA	527820	42.736946	18
GTACATG	408700	42.473072	22
GCAGAGT	534165	42.386795	17