##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805451_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 39980347 Sequences flagged as poor quality 0 Sequence length 53 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.76401365400856 37.0 37.0 37.0 37.0 37.0 2 36.66951817601783 37.0 37.0 37.0 37.0 37.0 3 38.59224708579943 39.0 39.0 39.0 38.0 39.0 4 38.5708777114916 39.0 39.0 39.0 38.0 39.0 5 38.46979227068739 39.0 39.0 39.0 38.0 39.0 6 38.51033088832371 39.0 39.0 39.0 38.0 39.0 7 38.49048028522614 39.0 39.0 39.0 37.0 39.0 8 39.43352560196639 40.0 40.0 40.0 39.0 40.0 9 39.47422817515816 40.0 40.0 40.0 39.0 40.0 10 39.161649272328724 40.0 40.0 40.0 38.0 40.0 11 39.357460529294556 40.0 40.0 40.0 38.0 40.0 12 39.43110686357975 40.0 40.0 40.0 38.0 40.0 13 39.46258062742677 40.0 40.0 40.0 39.0 40.0 14 39.46942408979092 40.0 40.0 40.0 39.0 40.0 15 39.456553165984275 40.0 40.0 40.0 39.0 40.0 16 39.443628140596175 40.0 40.0 40.0 39.0 40.0 17 39.4250065913635 40.0 40.0 40.0 39.0 40.0 18 39.397082646631354 40.0 40.0 40.0 39.0 40.0 19 39.39752293795749 40.0 40.0 40.0 38.0 40.0 20 39.35611061604843 40.0 40.0 40.0 38.0 40.0 21 39.30129003132464 40.0 40.0 40.0 38.0 40.0 22 39.31105710513218 40.0 40.0 40.0 38.0 40.0 23 39.02313759307792 40.0 39.0 40.0 37.0 40.0 24 39.148313345054255 40.0 40.0 40.0 38.0 40.0 25 39.1912517917866 40.0 40.0 40.0 38.0 40.0 26 39.20883145411419 40.0 40.0 40.0 38.0 40.0 27 39.206127300495915 40.0 40.0 40.0 38.0 40.0 28 39.18340798792967 40.0 40.0 40.0 38.0 40.0 29 39.174983248644644 40.0 40.0 40.0 38.0 40.0 30 39.09667637451971 40.0 40.0 40.0 38.0 40.0 31 39.01606436782552 40.0 40.0 40.0 37.0 40.0 32 38.984440980464726 40.0 40.0 40.0 37.0 40.0 33 38.82110580480955 40.0 40.0 40.0 37.0 40.0 34 38.819900412570206 40.0 40.0 40.0 37.0 40.0 35 38.81099776347614 40.0 40.0 40.0 36.0 40.0 36 38.76541771886072 40.0 39.0 40.0 36.0 40.0 37 38.70969826750128 40.0 39.0 40.0 36.0 40.0 38 38.56565687136232 40.0 39.0 40.0 35.0 40.0 39 38.548284360813575 40.0 39.0 40.0 35.0 40.0 40 34.21849465188484 40.0 35.0 40.0 10.0 40.0 41 35.072679809407354 40.0 35.0 40.0 15.0 40.0 42 36.93255686350096 40.0 35.0 40.0 30.0 40.0 43 37.749665729514554 40.0 37.0 40.0 34.0 40.0 44 37.98014009233086 40.0 38.0 40.0 35.0 40.0 45 38.157569792978535 40.0 38.0 40.0 35.0 40.0 46 38.16459149291526 40.0 38.0 40.0 35.0 40.0 47 38.22683502471852 40.0 38.0 40.0 35.0 40.0 48 38.148446085272845 40.0 38.0 40.0 35.0 40.0 49 38.12089217234658 40.0 38.0 40.0 35.0 40.0 50 37.99839941359188 40.0 38.0 40.0 35.0 40.0 51 37.828286808015946 40.0 37.0 40.0 35.0 40.0 52 37.674847244322315 40.0 37.0 40.0 34.0 40.0 53 37.51893601623818 40.0 37.0 40.0 34.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 9.0 12 19.0 13 108.0 14 275.0 15 773.0 16 1706.0 17 2911.0 18 4249.0 19 5820.0 20 7988.0 21 12456.0 22 18683.0 23 27579.0 24 38902.0 25 53873.0 26 70915.0 27 91765.0 28 117012.0 29 144563.0 30 178110.0 31 219157.0 32 274368.0 33 357295.0 34 502009.0 35 809445.0 36 1522626.0 37 3528926.0 38 7624023.0 39 2.4364781E7 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 10.550003480460036 35.64682417588822 34.7968615680099 19.00631077564184 2 26.715621052513626 43.4265940713321 14.054002582819002 15.803782293335273 3 36.618288980833505 25.022361611818926 19.118225762272647 19.241123645074918 4 21.049824805172403 24.229607111714163 19.87983495991168 34.84073312320176 5 20.282677886712687 36.097693199111056 23.13621490078613 20.483414013390128 6 33.015426304328976 23.48199479109073 20.940553617506122 22.56202528707417 7 22.16156102897256 22.513954168531853 34.73387812266862 20.590606679826966 8 32.970621790751345 23.980264603506317 22.576702498355004 20.472411107387337 9 32.41519389514053 24.100871360621255 23.016793726177514 20.4671410180607 10 20.465540231554268 24.56462921644977 34.51726669605944 20.452563855936518 11 20.711353505761217 35.72957233212608 23.27026826455508 20.28880589755762 12 19.919657025488046 24.43143127297019 35.03599656101034 20.61291514053142 13 20.68235425770567 23.727275303538512 23.25036848729702 32.3400019514588 14 20.397861979537097 35.75337152526465 22.759704912015895 21.089061583182357 15 20.824434065067017 35.675818421485936 22.778881834117147 20.720865679329897 16 21.135591944712235 23.456299666433612 22.947139503316468 32.46096888553769 17 32.51639611832283 23.162460295804838 23.55211924498804 20.769024340884286 18 20.474519643363777 23.453183135203904 23.533022362212115 32.53927485922021 19 20.512370740554104 35.384225154424 22.837358064951264 21.266046040070638 20 32.693343056777366 24.297305373562665 22.79257356120496 20.216778008455005 21 21.45114948602122 35.292262470858496 22.81289854737879 20.443689495741495 22 32.36682513035717 23.358374053131655 23.126937842735583 21.14786297377559 23 20.6674719456537 24.080121165531654 34.882226009694214 20.370180879120433 24 21.08958183879695 35.15820660586063 23.019139878901 20.733071676441426 25 21.12947644001189 23.54900021252942 22.936326690711315 32.385196656747375 26 20.655868744710997 33.23295568195043 25.55808232479823 20.55309324854034 27 20.810402170846594 23.949777124245568 34.79732429535942 20.442496409548422 28 30.081847463705103 23.12642008834991 26.29550213758775 20.496230310357237 29 31.001864491071075 23.16376843852806 25.36548019455659 20.468886875844277 30 30.24379203111969 23.140859682883693 25.34222126686394 21.273127019132676 31 25.968506476444542 24.545117129673738 26.445868516348796 23.040507877532928 32 24.88062197159019 26.33801302424914 27.139039088380095 21.64232591578057 33 24.01866597105823 26.393507790215025 27.219708723388518 22.368117515338223 34 24.100741296717608 25.407568373531124 27.64521778662902 22.84647254312225 35 23.068306535708658 26.189322468862013 27.782652811892806 22.959718183536527 36 22.949463144979706 25.73014936563707 27.78844815929186 23.531939330091355 37 23.416820269218775 25.668063861476742 27.75890614456148 23.15620972474301 38 24.408752630386125 25.537074503130253 27.679359561336476 22.37481330514715 39 23.36199833383137 26.139948210054303 27.874983176109 22.623070280005322 40 27.45420143552031 26.915714363359577 25.426962902548095 20.20312129857202 41 23.30298684000917 25.810964071922637 27.571328983212677 23.314720104855517 42 23.337751420716785 25.842634632460793 28.369263528403092 22.45035041841933 43 23.26786458356652 25.506249357965803 28.045979690971667 23.17990636749601 44 23.937493589037633 25.604865310448655 27.78389092020637 22.67375018030734 45 23.203550484441767 25.356515790120582 28.54219099198914 22.89774273344851 46 23.143143304884273 26.033453386485117 27.77852078172308 23.044882526907536 47 23.31513781008454 25.535276119539436 28.36977878155985 22.77980728881618 48 23.828875222118505 25.494388530444724 27.71271094770638 22.96402529973039 49 22.83614997138469 25.832544675012453 27.651325787642612 23.679979565960245 50 23.46316804103776 25.574730504465105 27.446500151687026 23.5156013028101 51 23.90224627114917 25.526892000212005 27.583657540541108 22.987204188097717 52 23.34696844927334 25.422918415390445 28.20990022923013 23.020212906106092 53 23.55283209522919 25.574600440561458 27.200094086226915 23.672473377982435 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 570.0 1 458.5 2 347.0 3 358.0 4 369.0 5 431.0 6 493.0 7 583.5 8 933.0 9 1192.0 10 1889.0 11 2586.0 12 4464.5 13 6343.0 14 10379.0 15 14415.0 16 23860.5 17 33306.0 18 51198.0 19 69090.0 20 96916.5 21 124743.0 22 529907.5 23 935072.0 24 698558.5 25 465263.5 26 468482.0 27 515660.5 28 562839.0 29 630125.5 30 697412.0 31 781229.5 32 865047.0 33 957621.5 34 1050196.0 35 1171755.5 36 1293315.0 37 1422824.0 38 1552333.0 39 1698580.0 40 1844827.0 41 1991868.5 42 2298924.0 43 2458938.0 44 2600350.0 45 2741762.0 46 2856637.0 47 2971512.0 48 3056520.5 49 3141529.0 50 3114148.0 51 3086767.0 52 2985521.5 53 2884276.0 54 2735309.0 55 2586342.0 56 2453214.0 57 2320086.0 58 2159359.5 59 1653778.0 60 1308923.0 61 1115220.0 62 921517.0 63 766744.0 64 611971.0 65 494536.5 66 377102.0 67 297802.0 68 218502.0 69 167795.5 70 117089.0 71 87827.0 72 58565.0 73 42762.0 74 26959.0 75 19921.5 76 9354.5 77 5825.0 78 4297.5 79 2770.0 80 2331.0 81 1892.0 82 1433.5 83 975.0 84 726.0 85 477.0 86 331.5 87 186.0 88 147.5 89 109.0 90 82.0 91 55.0 92 49.0 93 36.0 94 29.0 95 22.5 96 16.0 97 10.5 98 5.0 99 3.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 53 3.9980347E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.76808929241751 #Duplication Level Percentage of deduplicated Percentage of total 1 66.21412099864213 29.642796812861476 2 16.52977057124135 14.800124898330157 3 6.6099928173372815 8.877502460063814 4 3.3777185880837597 6.048560294239686 5 1.9757446204103988 4.422515579277313 6 1.2217988500437766 3.281856000967969 7 0.8251167764103238 2.5857231066106343 8 0.5876506927311367 2.104639894795082 9 0.42399978426099244 1.7083494181585681 >10 2.0811095809864164 16.355044779339767 >50 0.11359536063719018 3.444733162694146 >100 0.03741411036738688 2.7181829459876297 >500 0.0012868186780711915 0.39552935716898685 >1k 5.646536180023568E-4 0.49101011550772955 >5k 4.265452121809023E-5 0.140761952273209 >10k+ 7.312203055801102E-5 2.9826692217237745 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 619558 1.5496563849233225 No Hit CAGATCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGATCTCGTATGCCGTC 223114 0.5580591884307557 Illumina Paired End PCR Primer 2 (100% over 52bp) AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG 52310 0.13083928461151173 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.023669129234921347 0.0 0.0 0.0 0.0 2 0.7118147323733833 2.5012289162973E-6 0.0 2.5012289162973E-6 0.0 3 0.712307474469894 2.5012289162973E-6 0.0 1.25061445814865E-5 0.0 4 0.7154140007839351 2.5012289162973E-6 0.0 1.5007373497783798E-5 0.0 5 0.7155415634586664 2.5012289162973E-6 0.0 1.5007373497783798E-5 0.0 6 0.716186880519071 2.5012289162973E-6 0.0 2.25110602466757E-5 2.5012289162973E-6 7 0.7166471066396697 5.0024578325946E-6 0.0 2.5012289162973E-5 7.503686748891899E-6 8 0.7176576031218539 5.0024578325946E-6 0.0 2.7513518079270296E-5 7.503686748891899E-6 9 0.7209717314359477 5.0024578325946E-6 0.0 4.00196626607568E-5 1.00049156651892E-5 10 0.725263840256314 5.0024578325946E-6 0.0 4.00196626607568E-5 1.00049156651892E-5 11 0.7303413349563974 5.0024578325946E-6 0.0 4.00196626607568E-5 1.25061445814865E-5 12 0.736849532596603 5.0024578325946E-6 0.0 4.7523349409648695E-5 1.25061445814865E-5 13 0.7452386543818642 7.503686748891899E-6 0.0 5.0024578325946E-5 1.25061445814865E-5 14 0.7586702536623807 1.00049156651892E-5 0.0 5.7528265074837896E-5 1.25061445814865E-5 15 0.7786100505831027 1.25061445814865E-5 0.0 6.50319518237298E-5 1.25061445814865E-5 16 0.7946029082739077 1.5007373497783798E-5 0.0 6.50319518237298E-5 1.25061445814865E-5 17 0.8029244968784288 1.5007373497783798E-5 0.0 7.00344096563244E-5 1.25061445814865E-5 18 0.8094101834583877 1.75086024140811E-5 0.0 7.25356385726217E-5 1.5007373497783798E-5 19 0.8148453538935018 2.00098313303784E-5 0.0 7.753809640521629E-5 1.5007373497783798E-5 20 0.819272529075348 2.25110602466757E-5 0.0 7.753809640521629E-5 2.25110602466757E-5 21 0.8226842053171775 2.25110602466757E-5 0.0 8.754301207040549E-5 2.25110602466757E-5 22 0.8249278076550961 2.5012289162973E-5 0.0 9.00442409867028E-5 2.25110602466757E-5 23 0.8262784712698967 2.5012289162973E-5 0.0 9.504669881929739E-5 2.25110602466757E-5 24 0.8272764616074993 2.5012289162973E-5 0.0 9.754792773559469E-5 2.25110602466757E-5 25 0.8280293315113048 2.5012289162973E-5 0.0 1.0255038556818929E-4 2.25110602466757E-5 26 0.8289672923549163 2.5012289162973E-5 0.0 1.075528434007839E-4 2.25110602466757E-5 27 0.8297251647165543 3.0014746995567596E-5 0.0 1.1005407231708118E-4 2.25110602466757E-5 28 0.8307881870059807 3.0014746995567596E-5 0.0 1.1255530123337849E-4 2.7513518079270296E-5 29 0.8312434106687469 3.25159759118649E-5 0.0 1.300639036474596E-4 2.7513518079270296E-5 30 0.8320112879460501 3.50172048281622E-5 0.0 1.325651325637569E-4 2.7513518079270296E-5 31 0.8436420024068325 3.7518433744459494E-5 0.0 1.450712771452434E-4 2.7513518079270296E-5 32 0.8441322432744268 3.7518433744459494E-5 0.0 1.575774217267299E-4 2.7513518079270296E-5 33 0.8444599042624618 3.7518433744459494E-5 0.0 1.575774217267299E-4 3.0014746995567596E-5 34 0.8446850148649285 4.2520891577054094E-5 0.0 1.575774217267299E-4 3.25159759118649E-5 35 0.8449376389854746 5.0024578325946E-5 0.0 1.650811084756218E-4 3.50172048281622E-5 36 0.8452227790819324 7.503686748891899E-5 0.0 1.7008356630821638E-4 3.50172048281622E-5 37 0.845993157588152 7.503686748891899E-5 0.0 1.725847952245137E-4 3.7518433744459494E-5 38 0.846245781708698 7.503686748891899E-5 0.0 1.725847952245137E-4 3.7518433744459494E-5 39 0.8465759439256493 7.503686748891899E-5 0.0 1.7758725305710827E-4 3.7518433744459494E-5 40 0.8467835459257019 7.753809640521629E-5 0.0 1.8258971088970288E-4 4.00196626607568E-5 41 0.847061182335411 7.753809640521629E-5 0.0 1.9759708438748668E-4 4.2520891577054094E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGCAGT 507520 0.0 44.445892 1 GTGGTAT 516085 0.0 43.833027 6 AGTGGTA 515960 0.0 43.74846 5 ATCAACG 519450 0.0 43.690224 11 TCAACGC 519470 0.0 43.663666 12 CAACGCA 520220 0.0 43.60839 13 GTATCAA 519125 0.0 43.594902 9 GGTATCA 518935 0.0 43.585506 8 TGGTATC 519075 0.0 43.55564 7 TATCAAC 520405 0.0 43.475933 10 AACGCAG 522925 0.0 43.412025 14 ACGCAGA 522965 0.0 43.392525 15 CGCAGAG 524320 0.0 43.270077 16 AGAGTAC 520235 0.0 43.16445 19 AGCAGTG 524965 0.0 43.114853 2 GCAGTGG 525975 0.0 43.092823 3 CAGTGGT 526120 0.0 42.92551 4 CAGAGTA 527820 0.0 42.736946 18 GTACATG 408700 0.0 42.473072 22 GCAGAGT 534165 0.0 42.386795 17 >>END_MODULE