##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805449_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 50675822 Sequences flagged as poor quality 0 Sequence length 53 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.77075495687075 37.0 37.0 37.0 37.0 37.0 2 36.66458629916255 37.0 37.0 37.0 37.0 37.0 3 38.58967479600035 39.0 39.0 39.0 38.0 39.0 4 38.56608802517303 39.0 39.0 39.0 38.0 39.0 5 38.46728526672937 39.0 39.0 39.0 38.0 39.0 6 38.50726318756112 39.0 39.0 39.0 38.0 39.0 7 38.47709525067003 39.0 39.0 39.0 37.0 39.0 8 39.420696422053105 40.0 40.0 40.0 39.0 40.0 9 39.46488260220031 40.0 40.0 40.0 39.0 40.0 10 39.1078578458974 40.0 39.0 40.0 38.0 40.0 11 39.340723787371424 40.0 40.0 40.0 38.0 40.0 12 39.42950004836626 40.0 40.0 40.0 38.0 40.0 13 39.46259717306608 40.0 40.0 40.0 39.0 40.0 14 39.47359330451512 40.0 40.0 40.0 39.0 40.0 15 39.45588558977889 40.0 40.0 40.0 39.0 40.0 16 39.44091458447384 40.0 40.0 40.0 39.0 40.0 17 39.43360326745169 40.0 40.0 40.0 39.0 40.0 18 39.39882660413481 40.0 40.0 40.0 39.0 40.0 19 39.396588199398124 40.0 40.0 40.0 39.0 40.0 20 39.35046638217334 40.0 40.0 40.0 38.0 40.0 21 39.29203573648988 40.0 40.0 40.0 38.0 40.0 22 39.30860608437688 40.0 40.0 40.0 38.0 40.0 23 38.95707967006435 40.0 39.0 40.0 37.0 40.0 24 39.1187504368454 40.0 40.0 40.0 38.0 40.0 25 39.196675527039304 40.0 40.0 40.0 38.0 40.0 26 39.20534356601063 40.0 40.0 40.0 38.0 40.0 27 39.20845394476285 40.0 40.0 40.0 38.0 40.0 28 39.18560780326366 40.0 40.0 40.0 38.0 40.0 29 39.17426768134121 40.0 40.0 40.0 38.0 40.0 30 39.08987751594834 40.0 40.0 40.0 38.0 40.0 31 38.99308161197661 40.0 40.0 40.0 37.0 40.0 32 38.95554136250617 40.0 40.0 40.0 37.0 40.0 33 38.78119597152267 40.0 40.0 40.0 36.0 40.0 34 38.78260993970655 40.0 40.0 40.0 36.0 40.0 35 38.77174333748351 40.0 40.0 40.0 36.0 40.0 36 38.73660121388855 40.0 39.0 40.0 36.0 40.0 37 38.67079438790356 40.0 39.0 40.0 36.0 40.0 38 38.49867376596279 40.0 39.0 40.0 35.0 40.0 39 38.48413831353342 40.0 39.0 40.0 35.0 40.0 40 34.13773288176756 40.0 35.0 40.0 10.0 40.0 41 35.00362397673589 40.0 35.0 40.0 15.0 40.0 42 36.880160345499675 40.0 35.0 40.0 30.0 40.0 43 37.70500517978771 40.0 37.0 40.0 34.0 40.0 44 37.938110446437356 40.0 38.0 40.0 35.0 40.0 45 38.13118322974613 40.0 38.0 40.0 35.0 40.0 46 38.13046803661123 40.0 38.0 40.0 35.0 40.0 47 38.17023923163989 40.0 38.0 40.0 35.0 40.0 48 38.08371785266749 40.0 38.0 40.0 35.0 40.0 49 38.04770075559899 40.0 38.0 40.0 35.0 40.0 50 37.9191804920303 40.0 38.0 40.0 35.0 40.0 51 37.73937642294189 40.0 37.0 40.0 34.0 40.0 52 37.59404605217849 40.0 37.0 40.0 34.0 40.0 53 37.41272234321132 40.0 37.0 40.0 34.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 6.0 12 17.0 13 69.0 14 225.0 15 740.0 16 1613.0 17 2924.0 18 4628.0 19 6984.0 20 10901.0 21 16716.0 22 25657.0 23 37944.0 24 53959.0 25 75038.0 26 98718.0 27 127370.0 28 161118.0 29 197090.0 30 238116.0 31 290946.0 32 359120.0 33 462366.0 34 648260.0 35 1051505.0 36 1986992.0 37 4635602.0 38 9405196.0 39 3.0776E7 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 12.399068731435674 37.79000368262403 30.226580241757105 19.58434734418319 2 23.566483045899087 41.12168718249898 17.850214644766886 17.461615126835042 3 36.94501886915618 23.194242414064835 20.067842214774533 19.79289650200445 4 20.205211471458718 22.93236210356884 20.352392113146188 36.51003431182626 5 20.88324882031514 38.0870467182555 21.645566992480163 19.3841374689492 6 36.144106355097705 22.745667549309807 20.66127511459015 20.44895098100234 7 21.020408904269967 22.2485290914472 37.32801018994817 19.403051814334653 8 35.08242846065723 23.258444628683083 21.968835552386302 19.690291358273377 9 34.700319217318274 22.78595895296972 22.689384298492485 19.824337531219523 10 19.740149454309787 23.209689622794873 37.11757847756273 19.93258244533261 11 19.48844164777436 37.97971348150998 22.655589089408355 19.876255781307307 12 19.358582876070564 23.158402837550423 37.330309116643434 20.15270516973558 13 19.452160045869608 23.15673734902613 22.496529015355684 34.89457358974858 14 19.86789084546078 38.084887897822355 22.18107088623052 19.866150370486345 15 19.615275308213057 37.93373889426007 22.2603749772426 20.190610820284277 16 19.85400453889036 22.93435713780824 22.37848652953276 34.833151793768636 17 34.961903528668955 22.59183482016335 22.299279131574817 20.146982519592875 18 19.912584743075307 22.975765444909804 22.274474403197644 34.837175408817245 19 20.115474397238195 37.737665113749905 22.257103200023078 19.88975728898882 20 35.01935498944644 22.935625987477813 22.337228195331495 19.707790827744244 21 20.13720073450412 37.761408191859225 22.316241855928848 19.785149217707808 22 34.7868693674076 22.741428841548935 22.606348644921834 19.865353146121638 23 20.040937865793275 22.871980251252758 37.29810440963345 19.788977473320514 24 19.818796427219276 37.56813850991899 22.51481781588072 20.098247246981018 25 19.910281869724777 22.960450449131343 22.45227319647622 34.67699448466766 26 20.154485111262723 34.2616820305352 25.71782851396076 19.866004344241322 27 20.421878899172075 22.57798798014564 37.1971548877885 19.802978232893786 28 32.00432545524372 22.494824060278688 25.631850628885704 19.868999855591884 29 32.14572227363179 22.53532660999559 25.477056889180798 19.841894227191816 30 32.03180206923925 22.525536931596292 25.470752107385646 19.971908891778806 31 26.769430597494797 24.25004768546231 26.792068612128283 22.188453104914608 32 24.71797497433786 26.329915279913962 27.706522451673305 21.245587294074873 33 24.3776943568868 25.732336418736335 27.740489340261714 22.14947988411515 34 23.56725659033217 25.30832948304223 28.29543248454855 22.82898144207705 35 22.964831236481967 25.448818570718007 28.565397518366847 23.020952674433186 36 22.963647239900716 25.787946764829982 28.53898847462208 22.709417520647225 37 23.756922976010138 25.680702327828055 28.349665447952678 22.212709248209137 38 23.88530964529791 25.59176445129987 28.361452133919013 22.161473769483205 39 23.512477015173033 25.56697945619905 28.53659088154505 22.383952647082864 40 27.558361066151033 27.115323358740977 25.316607592472796 20.00970798263519 41 23.367062501719264 26.05857089007851 28.166428163710894 22.40793844449134 42 23.452472068435316 26.06031333838058 28.30306728916997 22.184147304014132 43 23.23977300259678 25.58826574140228 28.7967188771008 22.37524237890014 44 23.271855363293366 25.599937974365766 28.55911838983095 22.569088272509916 45 23.39037539440406 25.264813662026043 28.568793615227396 22.776017328342498 46 23.243246059235112 25.35747126114698 28.364287805731102 23.034994873886802 47 23.204043932429947 25.51746077251594 28.439576175005115 22.838919120049006 48 23.01939966558411 25.502747641666275 28.44443648097114 23.03341621177847 49 22.713097776687274 26.08991917289472 28.259585014723587 22.937398035694418 50 23.513392639195867 25.74865189162595 28.005978867002888 22.731976602175294 51 23.302473514884475 25.539279856180723 28.242115145167258 22.916131483767547 52 23.48664023644254 25.512320254025678 28.130572800575393 22.870466708956393 53 23.796389528718446 25.61903781254895 27.726464900756813 22.858107757975784 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 559.0 1 447.5 2 336.0 3 385.0 4 434.0 5 520.0 6 606.0 7 781.5 8 1357.0 9 1757.0 10 2664.0 11 3571.0 12 6117.5 13 8664.0 14 13665.5 15 18667.0 16 30891.0 17 43115.0 18 67314.0 19 91513.0 20 128962.0 21 166411.0 22 768670.5 23 1370930.0 24 1009477.5 25 637167.0 26 626309.0 27 678039.0 28 729769.0 29 807534.0 30 885299.0 31 986100.0 32 1086901.0 33 1199335.0 34 1311769.0 35 1458955.5 36 1606142.0 37 1766705.0 38 1927268.0 39 2116368.5 40 2305469.0 41 2492539.0 42 2890493.0 43 3101377.0 44 3288800.0 45 3476223.0 46 3630453.0 47 3784683.0 48 3906566.0 49 4028449.0 50 3987734.5 51 3947020.0 52 3819847.5 53 3692675.0 54 3499155.0 55 3305635.0 56 3176135.5 57 3046636.0 58 2653211.0 59 1933701.5 60 1607617.0 61 1382044.5 62 1156472.0 63 959408.5 64 762345.0 65 611722.5 66 461100.0 67 362993.5 68 264887.0 69 202486.0 70 140085.0 71 104537.0 72 68989.0 73 49767.0 74 30545.0 75 22485.5 76 10334.0 77 6242.0 78 4637.0 79 3032.0 80 2443.0 81 1854.0 82 1395.0 83 936.0 84 650.0 85 364.0 86 265.5 87 167.0 88 130.5 89 94.0 90 75.0 91 56.0 92 37.5 93 18.0 94 17.0 95 11.5 96 6.0 97 5.0 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 53 5.0675822E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.33483767725724 #Duplication Level Percentage of deduplicated Percentage of total 1 61.66695871765854 23.639928524915632 2 17.667821209823416 13.545861163787665 3 7.179847158332289 8.257148260865549 4 3.7402597490031777 5.735290013952628 5 2.235823501442735 4.285496550140207 6 1.4777304348934566 3.3989133811430046 7 1.1118427324756197 2.9835617470463722 8 0.824427230739783 2.5283427253696225 9 0.6570604148996656 2.2669473914396976 >10 3.220809064023389 20.846141030412756 >50 0.15482550668346198 4.044431380339056 >100 0.058927225481259754 3.777130633919914 >500 0.0025428352895515895 0.6671470158184174 >1k 9.193532259731259E-4 0.5962410721520902 >5k 1.0520159631057164E-4 0.27130272376698 >10k+ 9.966443159932313E-5 3.1561163849303955 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 943758 1.8623437425445217 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG 113706 0.22437919211256208 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCAGTG 85670 0.16905497852605134 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCC 56032 0.11056949406760487 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.012384604239868077 1.9733276354155635E-6 0.0 3.946655270831127E-6 0.0 2 0.017055470752896717 1.9733276354155635E-6 0.0 7.893310541662254E-6 0.0 3 0.017126510547771676 1.9733276354155635E-6 0.0 7.893310541662254E-6 0.0 4 0.0172054436531883 1.9733276354155635E-6 0.0 7.893310541662254E-6 1.9733276354155635E-6 5 0.017262670154615353 3.946655270831127E-6 0.0 7.893310541662254E-6 5.919982906246691E-6 6 0.018126987658927368 3.946655270831127E-6 0.0 7.893310541662254E-6 5.919982906246691E-6 7 0.019040638354124773 3.946655270831127E-6 0.0 1.1839965812493383E-5 5.919982906246691E-6 8 0.020802819932550873 3.946655270831127E-6 0.0 1.3813293447908945E-5 5.919982906246691E-6 9 0.02687474906672456 3.946655270831127E-6 0.0 1.7759948718740074E-5 5.919982906246691E-6 10 0.03401424845165807 3.946655270831127E-6 0.0 1.7759948718740074E-5 5.919982906246691E-6 11 0.04335795480535076 3.946655270831127E-6 0.0 1.9733276354155636E-5 7.893310541662254E-6 12 0.05372779152945955 3.946655270831127E-6 0.0 1.9733276354155636E-5 7.893310541662254E-6 13 0.07126475422539767 3.946655270831127E-6 0.0 2.3679931624986765E-5 7.893310541662254E-6 14 0.0996076590528714 3.946655270831127E-6 0.0 2.9599914531233456E-5 9.866638177077818E-6 15 0.14704448208062615 3.946655270831127E-6 0.0 2.9599914531233456E-5 9.866638177077818E-6 16 0.1851277321165111 3.946655270831127E-6 0.0 3.354656980206458E-5 9.866638177077818E-6 17 0.20183195055030384 3.946655270831127E-6 0.0 3.551989743748015E-5 9.866638177077818E-6 18 0.21080467130853842 3.946655270831127E-6 0.0 3.551989743748015E-5 1.1839965812493383E-5 19 0.217521878579493 5.919982906246691E-6 0.0 3.749322507289571E-5 1.1839965812493383E-5 20 0.22086074893861612 5.919982906246691E-6 0.0 3.749322507289571E-5 1.1839965812493383E-5 21 0.22255978403270893 5.919982906246691E-6 0.0 4.735986324997353E-5 1.5786621083324508E-5 22 0.22404175308690602 5.919982906246691E-6 0.0 4.933319088538909E-5 1.7759948718740074E-5 23 0.22553161545164477 5.919982906246691E-6 0.0 5.525317379163578E-5 1.9733276354155636E-5 24 0.2267787585172274 5.919982906246691E-6 0.0 5.919982906246691E-5 1.9733276354155636E-5 25 0.22793315518394552 5.919982906246691E-6 0.0 5.919982906246691E-5 1.9733276354155636E-5 26 0.2293381644603614 5.919982906246691E-6 0.0 6.314648433329803E-5 2.3679931624986765E-5 27 0.23076685366840227 7.893310541662254E-6 0.0 6.906646723954472E-5 2.3679931624986765E-5 28 0.23414124392496288 7.893310541662254E-6 0.0 7.10397948749603E-5 2.3679931624986765E-5 29 0.2353351071443893 7.893310541662254E-6 0.0 8.485308832286924E-5 2.3679931624986765E-5 30 0.2380484326430857 9.866638177077818E-6 0.0 8.485308832286924E-5 3.1573242166649016E-5 31 0.2826633971521962 9.866638177077818E-6 0.0 9.471972649994706E-5 3.1573242166649016E-5 32 0.2836046744342894 9.866638177077818E-6 0.0 9.866638177077818E-5 3.1573242166649016E-5 33 0.2842381126052578 9.866638177077818E-6 0.0 1.0063970940619375E-4 3.1573242166649016E-5 34 0.28461501818362217 9.866638177077818E-6 0.0 1.0063970940619375E-4 3.1573242166649016E-5 35 0.2850313903146948 1.3813293447908945E-5 0.0 1.0458636467702487E-4 3.1573242166649016E-5 36 0.2854556557563092 2.17066039895712E-5 0.0 1.08533019947856E-4 3.354656980206458E-5 37 0.2867777852720376 2.17066039895712E-5 0.0 1.08533019947856E-4 3.551989743748015E-5 38 0.28720797069655823 2.17066039895712E-5 0.0 1.1050634758327156E-4 3.551989743748015E-5 39 0.28763026281053716 2.17066039895712E-5 0.0 1.1050634758327156E-4 3.551989743748015E-5 40 0.28799730175072447 2.17066039895712E-5 0.0 1.1050634758327156E-4 3.551989743748015E-5 41 0.2884590604174117 2.17066039895712E-5 0.0 1.1247967521868713E-4 3.946655270831127E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGCAGT 791105 0.0 45.15738 1 AGTGGTA 812880 0.0 43.932693 5 AGCAGTG 814920 0.0 43.908077 2 GTGGTAT 816840 0.0 43.828175 6 GCAGTGG 819635 0.0 43.72373 3 ATCAACG 822045 0.0 43.690742 11 TCAACGC 821880 0.0 43.66892 12 TGGTATC 819865 0.0 43.644966 7 GGTATCA 820610 0.0 43.628254 8 GTATCAA 821195 0.0 43.614056 9 CAACGCA 823075 0.0 43.60837 13 TATCAAC 822015 0.0 43.57112 10 AACGCAG 826380 0.0 43.466385 14 ACGCAGA 826620 0.0 43.43642 15 CGCAGAG 828765 0.0 43.321167 16 CAGTGGT 825755 0.0 43.260513 4 AGAGTAC 822785 0.0 43.221878 19 CAGAGTA 831115 0.0 42.948437 18 GAGTACT 176045 0.0 42.75106 20 GCAGAGT 839755 0.0 42.647594 17 >>END_MODULE