##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805448_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 21108538 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.25140315260109 37.0 37.0 37.0 35.0 37.0 2 36.17500302484236 37.0 37.0 37.0 35.0 37.0 3 37.873826031911825 39.0 38.0 39.0 35.0 39.0 4 37.859765560267604 39.0 38.0 39.0 35.0 39.0 5 37.89920216170348 39.0 38.0 39.0 35.0 39.0 6 37.83667623025337 39.0 38.0 39.0 35.0 39.0 7 37.78491461606673 39.0 38.0 39.0 35.0 39.0 8 38.73468849429553 40.0 39.0 40.0 36.0 40.0 9 38.71105166070715 40.0 39.0 40.0 36.0 40.0 10 38.70410390335891 40.0 39.0 40.0 36.0 40.0 11 38.78289874931177 40.0 39.0 40.0 36.0 40.0 12 38.75169658836628 40.0 39.0 40.0 36.0 40.0 13 38.840488479116836 40.0 39.0 40.0 36.0 40.0 14 38.77454217814611 40.0 39.0 40.0 36.0 40.0 15 38.76029922110191 40.0 39.0 40.0 36.0 40.0 16 38.56709365660473 40.0 39.0 40.0 36.0 40.0 17 38.37395962714234 40.0 39.0 40.0 35.0 40.0 18 38.53489123690139 40.0 39.0 40.0 35.0 40.0 19 38.48473612904883 40.0 39.0 40.0 35.0 40.0 20 38.39889901422827 40.0 39.0 40.0 35.0 40.0 21 38.40068620574291 40.0 39.0 40.0 35.0 40.0 22 38.22860806371337 40.0 38.0 40.0 35.0 40.0 23 38.222280576703135 40.0 38.0 40.0 34.0 40.0 24 38.227311621487004 40.0 38.0 40.0 35.0 40.0 25 38.08682519841024 40.0 38.0 40.0 34.0 40.0 26 38.038521000364874 40.0 38.0 40.0 34.0 40.0 27 37.61202604367958 40.0 38.0 40.0 33.0 40.0 28 37.797387341558185 40.0 38.0 40.0 33.0 40.0 29 37.839379875574515 40.0 38.0 40.0 34.0 40.0 30 37.7597433796694 40.0 38.0 40.0 33.0 40.0 31 37.69646448276048 40.0 38.0 40.0 33.0 40.0 32 37.61879287897627 40.0 38.0 40.0 33.0 40.0 33 37.4746639961517 40.0 38.0 40.0 33.0 40.0 34 37.27943579038965 40.0 37.0 40.0 32.0 40.0 35 37.295309556730075 40.0 37.0 40.0 32.0 40.0 36 37.22007454992856 40.0 37.0 40.0 32.0 40.0 37 36.91614701122361 40.0 37.0 40.0 31.0 40.0 38 36.92049027744129 40.0 36.0 40.0 31.0 40.0 39 36.86747836349443 39.0 36.0 40.0 31.0 40.0 40 36.73992391135757 39.0 36.0 40.0 31.0 40.0 41 36.871726976070065 40.0 36.0 40.0 31.0 40.0 42 36.84727075840117 40.0 36.0 40.0 31.0 40.0 43 36.78489855621455 39.0 36.0 40.0 31.0 40.0 44 36.57919610538636 39.0 36.0 40.0 30.0 40.0 45 36.52684686168222 39.0 36.0 40.0 30.0 40.0 46 36.360586555070746 39.0 35.0 40.0 30.0 40.0 47 36.1991862723984 39.0 35.0 40.0 29.0 40.0 48 31.273087932475477 38.0 30.0 40.0 3.0 40.0 49 32.52113770266799 38.0 30.0 40.0 12.0 40.0 50 34.069920332710865 38.0 30.0 40.0 22.0 40.0 51 34.51562846275758 37.0 33.0 40.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 8.0 8 62.0 9 182.0 10 332.0 11 408.0 12 446.0 13 523.0 14 592.0 15 808.0 16 1366.0 17 2406.0 18 4784.0 19 8888.0 20 15157.0 21 24018.0 22 35858.0 23 50952.0 24 68373.0 25 88167.0 26 111595.0 27 139173.0 28 170509.0 29 210659.0 30 258390.0 31 318476.0 32 396938.0 33 509453.0 34 687919.0 35 993929.0 36 1617471.0 37 2978251.0 38 4403349.0 39 8009096.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 20.402156700762504 30.433633063549927 21.781115300358557 27.383094935329012 2 23.38936026739512 24.822031729530487 30.227995894362746 21.56061210871165 3 20.998190400491023 26.486263520476882 27.60811288778029 24.907433191251805 4 21.130137009015026 28.00175455069413 27.61499635834561 23.25311208194523 5 24.36070655390724 28.556501639289277 26.09459262408415 20.988199182719335 6 24.1016502421911 26.28245499522516 27.613627244103782 22.00226751847996 7 23.09082703880297 27.14479799595784 28.027701397415587 21.736673567823598 8 22.92442044067666 26.07819641511885 28.151798101791798 22.845585042412694 9 22.800878014384512 25.934548380375748 28.857654660877035 22.4069189443627 10 22.223467110796587 26.680805653143764 28.75653917860157 22.339188057458077 11 22.050589197603358 28.053809316400784 27.47018765581965 22.425413830176204 12 22.129533556516325 26.69611225561903 28.333463928198157 22.84089025966649 13 22.381474264110572 27.01654657466093 26.72765873221537 23.87432042901313 14 22.543934591775137 28.126727677681895 26.73596816605679 22.59336956448618 15 22.51879784379193 27.877757332127885 26.632995615328735 22.970449208751454 16 23.102751123739598 26.594954136567868 26.52111197847999 23.78118276121255 17 24.674986964990186 26.30443188438726 26.555581442921344 22.464999707701217 18 22.795321021285318 26.639372182005218 26.41115647137665 24.15415032533281 19 23.230429317274364 27.768592974084704 26.368803940850853 22.632173767790075 20 24.208995431137865 26.614112261114435 26.531671686594304 22.645220621153392 21 23.010025611437417 27.698730248395222 26.530496806552872 22.760747333614482 22 24.270060768775174 26.389383291253992 26.662064421515126 22.678491518455708 23 22.756597354113296 26.677105728497157 27.900766978745757 22.665529938643786 24 22.73110056224642 27.63601155134477 26.60061535289654 23.03227253351227 25 22.98679330610201 26.43829714781763 26.621407887178165 23.953501658902194 26 22.94487661817223 26.984412658043865 27.464659087237592 22.60605163654631 27 23.233844996749657 26.24658799202484 27.885071907869698 22.63449510335581 28 23.735627735089942 26.37761080374207 27.105581637155545 22.781179824012447 29 23.688092467607184 26.414846921184214 27.19944413014298 22.697616481065623 30 23.59146805903848 26.3172892409697 27.156456785401247 22.93478591459058 31 23.44218249506432 26.576411876559142 27.038585050276815 22.942820578099724 32 23.24874891856556 26.675149174234612 27.220231927005084 22.855869980194743 33 23.31811421520524 26.451647196030347 27.211699834446136 23.01853875431828 34 23.447161522981837 26.47108956574823 27.155589837628735 22.926159073641198 35 23.208158708101905 26.634596863127136 27.210108061486775 22.947136367284177 36 23.171955348115535 26.537825594553254 27.16091469717135 23.129304360159857 37 23.533974735720683 26.50044261710593 27.043147185276407 22.92243546189698 38 23.327968047810796 26.653177022492038 27.129875124463855 22.888979805233316 39 23.260871975122104 26.558746039161974 27.12443656685271 23.05594541886321 40 23.320994566274557 26.62620215573433 27.001078899921914 23.051724378069196 41 23.228742795924568 26.658326597512342 27.16576107734226 22.94716952922083 42 23.180823797460533 26.578823223095792 27.161667946875333 23.078685032568337 43 23.292825869797333 26.65762072200358 26.983829955442673 23.065723452756416 44 23.40867472678591 26.535011567357248 27.17227029176535 22.884043414091494 45 23.26020873638904 26.46655585526577 27.1344704214001 23.13876498694509 46 23.42087831947433 26.58373118972048 26.958792693269423 23.036597797535766 47 23.289002772243155 26.631209608168977 27.083012570553205 22.99677504903466 48 21.021413230987385 35.32476289925906 23.97167440018821 19.68214946956535 49 23.39451931725447 26.66858311077726 26.8591789729824 23.077718598985868 50 23.324827138667775 26.67974920859038 27.020810252230635 22.974613400511206 51 23.37504378559993 26.546315050336506 26.95168656398657 23.126954600076992 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 16666.0 1 10590.5 2 4515.0 3 3988.5 4 3462.0 5 3697.0 6 3932.0 7 4682.5 8 5433.0 9 6617.5 10 7802.0 11 10830.0 12 13858.0 13 18498.0 14 23138.0 15 30290.0 16 37442.0 17 51163.5 18 64885.0 19 84669.5 20 104454.0 21 135169.5 22 165885.0 23 265448.0 24 365011.0 25 346739.0 26 367770.0 27 407073.0 28 449493.5 29 491914.0 30 538581.5 31 585249.0 32 637744.5 33 690240.0 34 750388.5 35 810537.0 36 877535.0 37 944533.0 38 1000328.5 39 1056124.0 40 1116891.0 41 1177658.0 42 1232141.5 43 1286625.0 44 1335788.5 45 1384952.0 46 1417737.5 47 1450523.0 48 1462502.5 49 1474482.0 50 1469928.5 51 1465375.0 52 1436994.0 53 1408613.0 54 1343451.0 55 1278289.0 56 1190669.0 57 1103049.0 58 1006301.5 59 909554.0 60 804196.5 61 698839.0 62 601953.5 63 505068.0 64 427053.0 65 349038.0 66 281980.5 67 214923.0 68 173785.0 69 132647.0 70 101633.0 71 70619.0 72 52312.5 73 34006.0 74 25399.5 75 12681.0 76 8569.0 77 6364.0 78 4159.0 79 3107.5 80 2056.0 81 1559.0 82 1062.0 83 769.5 84 477.0 85 361.5 86 246.0 87 188.5 88 131.0 89 103.0 90 75.0 91 65.0 92 55.0 93 37.5 94 20.0 95 15.0 96 10.0 97 7.5 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2.1108538E7 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.32770233268237 #Duplication Level Percentage of deduplicated Percentage of total 1 64.72392551254316 33.22130382510521 2 19.092088607730567 19.599060819335815 3 7.542370100513963 11.61397582206313 4 3.3259166435970697 6.828466378634578 5 1.6510562101250559 4.237246084391277 6 0.9496624755888707 2.924639571812628 7 0.6080130357040114 2.184553847770425 8 0.3827771615636937 1.5717657766792268 9 0.26916566961348487 1.243408983128827 >10 1.376227944257587 12.256999921349454 >50 0.061631772297603846 2.0970540460359666 >100 0.016832211066810706 1.4599013511883 >500 2.1956697272112547E-4 0.06834593716591639 >1k 7.54196665718705E-5 0.0792668181183264 >5k 9.41718971038242E-6 0.025951743914122916 >10k+ 2.8251569131074155E-5 0.5880590733067655 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 93183 0.44144696330934907 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.1740710796740164E-4 9.474839043803034E-6 0.0 0.0 1.894967808760607E-5 2 3.1740710796740164E-4 9.474839043803034E-6 0.0 0.0 2.3687097609507583E-5 3 3.1740710796740164E-4 9.474839043803034E-6 0.0 0.0 3.789935617521214E-5 4 3.1740710796740164E-4 9.474839043803034E-6 0.0 4.737419521901517E-6 3.789935617521214E-5 5 3.1740710796740164E-4 9.474839043803034E-6 0.0 9.474839043803034E-6 4.263677569711365E-5 6 3.2214452748930317E-4 9.474839043803034E-6 0.0 9.474839043803034E-6 5.211161474091668E-5 7 3.2214452748930317E-4 9.474839043803034E-6 0.0 9.474839043803034E-6 5.68490342628182E-5 8 3.2214452748930317E-4 1.421225856570455E-5 0.0 1.894967808760607E-5 5.68490342628182E-5 9 3.2214452748930317E-4 1.421225856570455E-5 0.0 1.894967808760607E-5 6.158645378471972E-5 10 3.2214452748930317E-4 1.421225856570455E-5 0.0 1.894967808760607E-5 7.106129282852276E-5 11 3.2214452748930317E-4 1.421225856570455E-5 0.0 1.894967808760607E-5 8.053613187232579E-5 12 3.2688194701120465E-4 1.421225856570455E-5 0.0 2.3687097609507583E-5 9.001097091612881E-5 13 3.410942055769092E-4 1.894967808760607E-5 0.0 2.3687097609507583E-5 9.948580995993185E-5 14 3.458316250988107E-4 1.894967808760607E-5 0.0 2.3687097609507583E-5 1.0896064900373488E-4 15 3.5056904462071225E-4 1.894967808760607E-5 0.0 2.3687097609507583E-5 1.4212258565704552E-4 16 3.553064641426138E-4 1.894967808760607E-5 0.0 2.3687097609507583E-5 1.4686000517894702E-4 17 3.647813031864168E-4 1.894967808760607E-5 0.0 2.3687097609507583E-5 1.658096832665531E-4 18 3.789935617521213E-4 1.894967808760607E-5 0.0 2.3687097609507583E-5 1.658096832665531E-4 19 4.12155498405432E-4 1.894967808760607E-5 0.0 2.84245171314091E-5 1.8002194183225763E-4 20 4.21630337449235E-4 1.894967808760607E-5 0.0 3.316193665331062E-5 1.8002194183225763E-4 21 4.3110517649303805E-4 1.894967808760607E-5 0.0 3.316193665331062E-5 1.8949678087606066E-4 22 4.547922741025456E-4 1.894967808760607E-5 0.0 3.316193665331062E-5 2.1318387848556826E-4 23 4.6426711314634866E-4 2.3687097609507583E-5 0.0 3.789935617521214E-5 2.1792129800746976E-4 24 4.8321679123395473E-4 2.84245171314091E-5 0.0 3.789935617521214E-5 2.226587175293713E-4 25 5.069038888434623E-4 2.84245171314091E-5 0.0 3.789935617521214E-5 2.3687097609507583E-4 26 5.542780840624774E-4 2.84245171314091E-5 0.0 4.263677569711365E-5 2.4160839561697736E-4 27 5.969148597595911E-4 2.84245171314091E-5 0.0 4.263677569711365E-5 2.558206541826819E-4 28 6.300767964129017E-4 2.84245171314091E-5 0.0 4.263677569711365E-5 2.6055807370458343E-4 29 6.632387330662124E-4 2.84245171314091E-5 0.0 4.263677569711365E-5 2.7003291274838644E-4 30 7.011380892414245E-4 2.84245171314091E-5 0.0 4.263677569711365E-5 2.795077517921895E-4 31 7.437748649385381E-4 2.84245171314091E-5 0.0 4.263677569711365E-5 2.8424517131409103E-4 32 8.24310996810864E-4 2.84245171314091E-5 0.0 4.263677569711365E-5 2.9845742987979557E-4 33 9.143219677269928E-4 2.84245171314091E-5 0.0 4.7374195219015165E-5 3.079322689235986E-4 34 9.616961629460079E-4 2.84245171314091E-5 0.0 5.211161474091668E-5 3.316193665331062E-4 35 0.001028020036252629 2.84245171314091E-5 0.0 5.211161474091668E-5 3.458316250988107E-4 36 0.0010990813290811519 2.84245171314091E-5 0.0 5.211161474091668E-5 3.647813031864168E-4 37 0.0011511929438220686 3.316193665331062E-5 0.0 8.053613187232579E-5 3.7425614223021985E-4 38 0.0012222542366505914 3.316193665331062E-5 0.0 8.053613187232579E-5 3.884684007959244E-4 39 0.0012696284318696066 3.316193665331062E-5 0.0 1.3738516613514399E-4 3.979432398397274E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGCAGT 36655 0.0 33.552036 1 TCAACGC 39635 0.0 30.893148 12 CAACGCA 39610 0.0 30.833122 13 AACGCAG 40455 0.0 30.177975 14 ATCAACG 40680 0.0 30.11615 11 ACGCAGA 40570 0.0 30.114616 15 GGTATCA 41185 0.0 29.834286 8 GTGGTAT 41430 0.0 29.54381 6 GTATCAA 41680 0.0 29.528551 9 AGTGGTA 41570 0.0 29.40101 5 CGCAGAG 41630 0.0 29.272158 16 TGGTATC 42200 0.0 29.042063 7 TATCAAC 42550 0.0 28.771444 10 AGAGTAC 42670 0.0 28.347786 19 AGCAGTG 43675 0.0 28.179737 2 GCAGTGG 44155 0.0 27.802061 3 GAGTACT 21625 0.0 27.332947 20 CAGAGTA 44880 0.0 27.227606 18 CAGTGGT 45610 0.0 26.91515 4 GCAGAGT 45955 0.0 26.629854 17 >>END_MODULE