##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805447_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 17852717 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 35.95934960488087 37.0 37.0 37.0 35.0 37.0 2 36.038065746519145 37.0 37.0 37.0 35.0 37.0 3 37.840808376674545 39.0 39.0 39.0 35.0 39.0 4 37.82512112862149 39.0 38.0 39.0 35.0 39.0 5 37.85603911158173 39.0 38.0 39.0 35.0 39.0 6 37.88075238071605 39.0 38.0 39.0 35.0 39.0 7 37.76991110092654 39.0 38.0 39.0 35.0 39.0 8 38.682091302965254 40.0 39.0 40.0 36.0 40.0 9 38.70109238834627 40.0 39.0 40.0 36.0 40.0 10 38.44161698188573 40.0 38.0 40.0 36.0 40.0 11 38.66825604192348 40.0 39.0 40.0 36.0 40.0 12 38.75432803869573 40.0 39.0 40.0 36.0 40.0 13 38.835112268905625 40.0 39.0 40.0 36.0 40.0 14 38.79537025092595 40.0 39.0 40.0 36.0 40.0 15 38.77437708781246 40.0 39.0 40.0 36.0 40.0 16 38.50779940106595 40.0 39.0 40.0 36.0 40.0 17 38.273720241014296 40.0 39.0 40.0 35.0 40.0 18 38.49284369432395 40.0 39.0 40.0 35.0 40.0 19 38.505380161462256 40.0 39.0 40.0 35.0 40.0 20 38.39955878984695 40.0 39.0 40.0 35.0 40.0 21 38.30963875134524 40.0 38.0 40.0 35.0 40.0 22 38.17103469460699 40.0 38.0 40.0 34.0 40.0 23 37.85456443408586 40.0 38.0 40.0 34.0 40.0 24 38.05016317684306 40.0 38.0 40.0 34.0 40.0 25 37.91523486313036 40.0 38.0 40.0 34.0 40.0 26 37.929091129378236 40.0 38.0 40.0 34.0 40.0 27 37.65973005677511 40.0 38.0 40.0 33.0 40.0 28 37.79352308110861 40.0 38.0 40.0 33.0 40.0 29 37.836319648152156 40.0 38.0 40.0 34.0 40.0 30 37.751270072785 40.0 38.0 40.0 33.0 40.0 31 37.61508267901183 40.0 38.0 40.0 33.0 40.0 32 37.50075868003733 40.0 38.0 40.0 33.0 40.0 33 37.353130002564875 40.0 37.0 40.0 32.0 40.0 34 37.065219820602096 40.0 37.0 40.0 31.0 40.0 35 37.07925639553912 40.0 37.0 40.0 31.0 40.0 36 36.973857984753806 39.0 37.0 40.0 31.0 40.0 37 36.46103307412535 39.0 36.0 40.0 30.0 40.0 38 36.49990861335 39.0 35.0 40.0 30.0 40.0 39 36.46508836722164 39.0 35.0 40.0 30.0 40.0 40 36.335545116185955 39.0 35.0 40.0 30.0 40.0 41 36.49041140348553 39.0 35.0 40.0 30.0 40.0 42 36.44491043016029 39.0 35.0 40.0 30.0 40.0 43 36.381059364801445 39.0 35.0 40.0 30.0 40.0 44 36.24481198015966 39.0 35.0 40.0 30.0 40.0 45 36.11970665305454 39.0 35.0 40.0 29.0 40.0 46 35.880924455364415 39.0 35.0 40.0 28.0 40.0 47 35.68368585017059 38.0 35.0 40.0 28.0 40.0 48 30.170983890015172 37.0 27.0 40.0 3.0 40.0 49 31.485361191800667 37.0 26.0 40.0 12.0 40.0 50 33.184911966060966 36.0 29.0 40.0 20.0 40.0 51 33.696394391957256 36.0 31.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 54.0 9 169.0 10 225.0 11 350.0 12 540.0 13 869.0 14 1119.0 15 1569.0 16 2310.0 17 3741.0 18 6192.0 19 10412.0 20 16811.0 21 25545.0 22 36658.0 23 49691.0 24 66478.0 25 85843.0 26 107455.0 27 131983.0 28 161201.0 29 194927.0 30 235800.0 31 287444.0 32 354739.0 33 456792.0 34 620627.0 35 925230.0 36 1550528.0 37 2822935.0 38 3793685.0 39 5900790.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 14.651484141041388 35.73307077012423 27.092296371471075 22.523148717363302 2 25.36641901622033 37.691142474279964 18.23969427174586 18.702744237753837 3 33.59518890037858 24.051857204704472 20.534734292825007 21.81821960209194 4 21.445760888944804 23.240272054948274 21.659168181515454 33.65479887459147 5 21.875902698732077 33.72697836413359 23.127807380803716 21.269311556330614 6 32.51567254440879 23.17602973261717 22.167886266275325 22.14041145669872 7 22.513805601690766 22.867314818243074 33.35646333272409 21.262416247342074 8 31.747033238694144 23.836164545710325 23.235214001319797 21.18158821427573 9 31.570175004734573 23.395794600900246 23.741809159916667 21.292221234448515 10 21.34937780058912 23.784452528990403 33.48266821235109 21.38350145806938 11 21.13197111677735 34.00589949417783 23.453600928082825 21.408528460961993 12 21.056918115040975 23.727127921201014 33.59829206949284 21.61766189426517 13 21.13739886203316 23.83060236713549 23.395060819033876 31.636937951797478 14 21.450124370424962 34.1011174937686 23.150722660309913 21.29803547549653 15 21.280553542634433 33.80084947294017 23.164944585185548 21.753652399239847 16 21.771929729239535 23.35729065777495 23.402953175138553 31.46782643784697 17 32.31254379935558 23.07472862534033 23.35735227304617 21.255375302257914 18 21.487832916412668 23.52956695611094 23.218297808675285 31.764302318801107 19 21.764255827278276 33.64129952880561 23.200474191127324 21.393970452788782 20 31.97714387115418 23.537168040024383 23.235230805484676 21.25045728333676 21 21.69736404828464 33.6426494633842 23.205745097510928 21.45424139082023 22 31.827962096749758 23.204064681023063 23.602345794200403 21.36562742802678 23 21.628719034755324 23.55853173497345 33.42535480733829 21.387394422932935 24 21.544233295133733 33.403918294341416 23.280680470093152 21.7711679404317 25 21.790296681451903 23.37723160009762 23.40029251569943 31.432179202751044 26 21.82117153372229 30.28047215446254 26.521296450282613 21.37705986153256 27 22.011081002404286 23.3442618286057 33.27576413158849 21.368893037401534 28 28.841419488137294 23.257356289241578 26.42829660045583 21.472927622165297 29 28.970128188331223 23.378211843048877 26.254205452312945 21.397454516306958 30 28.81025336367568 23.27472059294952 26.2813273744271 21.6336986689477 31 26.102127760161096 24.251025768234605 26.998596348107682 22.64825012349661 32 24.712227276105928 25.47488429912377 27.3618631830662 22.451025241704105 33 24.33328775670392 25.017788608871133 27.635989524731723 23.01293410969322 34 23.951855619511583 24.598569506254986 28.116314172234958 23.33326070199847 35 23.448772531374356 25.07197643921651 28.08999324864669 23.389257780762446 36 23.55594949497043 25.07521964303809 28.106971056562426 23.261859805429054 37 24.422669109693498 24.643683087565886 28.106478134392653 22.82716966834796 38 24.113999006425747 24.894378822002274 28.030657742460154 22.960964429111826 39 24.146240597439594 24.862366887908436 27.913011784144675 23.078380730507295 40 23.6415555122506 25.204012364056403 27.704242441080535 23.450189682612457 41 23.880695582638765 25.50773084007325 27.59791688850498 23.013656688783 42 23.822788430466915 25.463054167049194 27.754514901009188 22.959642501474704 43 23.756708852775745 25.050153430427425 28.319538140889144 22.87359957590769 44 23.970989961920083 24.824333461399743 27.91113531906656 23.29354125761362 45 24.00921383563073 24.599241672850134 27.85050029079607 23.54104420072306 46 23.933707121442634 24.65419129200334 27.714397758055537 23.697703828498486 47 23.764377153348704 24.81727011076241 27.781356753708693 23.636995982180192 48 21.25945871432343 34.769682396242544 24.387755656463945 19.583103232970085 49 23.47961937670328 25.366256575959838 27.62997923509346 23.524144812243424 50 24.02954687513391 25.11241846269114 27.63551340672683 23.222521255448118 51 23.946691139505543 24.845047395306832 27.709597368288534 23.498664096899088 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 5934.0 1 3644.0 2 1354.0 3 1158.5 4 963.0 5 1086.0 6 1209.0 7 1467.0 8 1725.0 9 2173.0 10 2621.0 11 3666.5 12 4712.0 13 6494.5 14 8277.0 15 11101.5 16 13926.0 17 19975.5 18 26025.0 19 35584.0 20 45143.0 21 66874.0 22 88605.0 23 342759.0 24 596913.0 25 409473.0 26 228696.5 27 235360.0 28 261613.0 29 287866.0 30 316718.0 31 345570.0 32 382474.5 33 419379.0 34 465771.5 35 512164.0 36 570883.5 37 629603.0 38 684713.5 39 739824.0 40 803607.0 41 867390.0 42 926806.0 43 986222.0 44 1056431.5 45 1126641.0 46 1193467.5 47 1260294.0 48 1286783.0 49 1313272.0 50 1335802.0 51 1358332.0 52 1360966.5 53 1363601.0 54 1334115.5 55 1304630.0 56 1225102.5 57 1145575.0 58 1028704.0 59 911833.0 60 803441.0 61 695049.0 62 601562.5 63 508076.0 64 431026.5 65 353977.0 66 282536.5 67 211096.0 68 171219.5 69 131343.0 70 98661.0 71 65979.0 72 48134.0 73 30289.0 74 22443.0 75 10957.0 76 7317.0 77 5497.0 78 3677.0 79 2805.0 80 1933.0 81 1502.5 82 1072.0 83 819.0 84 566.0 85 431.0 86 296.0 87 245.0 88 194.0 89 168.0 90 142.0 91 105.0 92 68.0 93 46.5 94 25.0 95 21.0 96 17.0 97 12.5 98 8.0 99 4.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1.7852717E7 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.540661692904806 #Duplication Level Percentage of deduplicated Percentage of total 1 74.4877903314961 37.6466221139617 2 13.877448277965978 14.02750837154926 3 4.509338074614777 6.837147902641207 4 2.0138414566485072 4.071235190544753 5 1.1482119949198317 2.9015696993489275 6 0.7494117927720081 2.272546073229801 7 0.5256933334757089 1.8598222244987836 8 0.4048994633720834 1.6371109438341735 9 0.3073088444575365 1.3978433108669273 >10 1.8327284126315415 15.901981975052577 >50 0.10047386988655206 3.483796686003297 >100 0.04045985175540517 3.574056329363288 >500 0.001791390170204678 0.5823136018564666 >1k 4.7782102016704123E-4 0.45658476601888504 >5k 6.822808012140694E-5 0.23009879905094327 >10k+ 5.685673343450559E-5 3.119762012179172 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 383455 2.1478803478484534 No Hit AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTATTT 60849 0.3408388762337968 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATC 36010 0.20170599242681098 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGT 35372 0.19813230669594997 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCAG 27150 0.15207769215184447 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.161527122174176E-5 0.0 0.0 5.601388292885615E-6 1.6804164878656847E-5 2 1.1762915415059792E-4 0.0 0.0 5.601388292885615E-6 1.6804164878656847E-5 3 1.1762915415059792E-4 0.0 0.0 1.120277658577123E-5 2.240555317154246E-5 4 1.1762915415059792E-4 0.0 0.0 1.120277658577123E-5 2.240555317154246E-5 5 1.1762915415059792E-4 0.0 0.0 1.6804164878656847E-5 2.240555317154246E-5 6 1.2883193073636915E-4 0.0 0.0 1.6804164878656847E-5 2.8006941464428077E-5 7 1.2883193073636915E-4 0.0 0.0 2.240555317154246E-5 2.8006941464428077E-5 8 1.2883193073636915E-4 0.0 0.0 2.240555317154246E-5 3.920971805019931E-5 9 1.3443331902925477E-4 0.0 0.0 2.240555317154246E-5 5.0412494635970534E-5 10 1.45636095615026E-4 0.0 0.0 2.240555317154246E-5 5.6013882928856154E-5 11 1.45636095615026E-4 0.0 0.0 2.240555317154246E-5 5.6013882928856154E-5 12 1.5683887220079723E-4 0.0 0.0 2.240555317154246E-5 5.6013882928856154E-5 13 1.6804164878656845E-4 0.0 0.0 2.240555317154246E-5 6.161527122174176E-5 14 1.7924442537233968E-4 0.0 0.0 2.240555317154246E-5 7.2818047807513E-5 15 2.0725136683676776E-4 0.0 0.0 2.240555317154246E-5 7.2818047807513E-5 16 2.0725136683676776E-4 0.0 0.0 3.920971805019931E-5 7.841943610039861E-5 17 2.2405553171542461E-4 0.0 0.0 3.920971805019931E-5 8.962221268616984E-5 18 2.632652497656239E-4 0.0 0.0 4.481110634308492E-5 1.0082498927194107E-4 19 2.744680263513951E-4 0.0 0.0 4.481110634308492E-5 1.0082498927194107E-4 20 3.024749678158232E-4 0.0 0.0 4.481110634308492E-5 1.1202776585771231E-4 21 3.5848885074467936E-4 0.0 0.0 4.481110634308492E-5 1.1202776585771231E-4 22 3.9209718050199307E-4 0.0 0.0 4.481110634308492E-5 1.1202776585771231E-4 23 4.089013453806499E-4 0.0 0.0 4.481110634308492E-5 1.1202776585771231E-4 24 4.145027336735355E-4 0.0 0.0 4.481110634308492E-5 1.1762915415059792E-4 25 4.6491522830950606E-4 0.0 0.0 4.481110634308492E-5 1.1762915415059792E-4 26 5.433346644099046E-4 0.0 0.0 4.481110634308492E-5 1.1762915415059792E-4 27 5.82544382460104E-4 0.0 0.0 4.481110634308492E-5 1.2323054244348352E-4 28 6.665652068533882E-4 0.0 0.0 4.481110634308492E-5 1.3443331902925477E-4 29 7.225790897822444E-4 0.0 0.0 4.481110634308492E-5 1.4003470732214037E-4 30 8.065999141755285E-4 5.601388292885615E-6 0.0 4.481110634308492E-5 1.45636095615026E-4 31 9.634387863763258E-4 5.601388292885615E-6 0.0 4.481110634308492E-5 1.5683887220079723E-4 32 0.0012042984829704073 5.601388292885615E-6 0.0 4.481110634308492E-5 1.6244026049368283E-4 33 0.0013163262488281196 5.601388292885615E-6 0.0 5.6013882928856154E-5 1.6804164878656845E-4 34 0.0014003470732214037 5.601388292885615E-6 0.0 5.6013882928856154E-5 1.7924442537233968E-4 35 0.0014787665093218025 5.601388292885615E-6 0.0 6.161527122174176E-5 1.7924442537233968E-4 36 0.0015795914985937435 5.601388292885615E-6 0.0 6.161527122174176E-5 1.848458136652253E-4 37 0.0017196262059158839 5.601388292885615E-6 0.0 1.0082498927194107E-4 1.848458136652253E-4 38 0.0019100734078739948 5.601388292885615E-6 0.0 1.45636095615026E-4 1.904472019581109E-4 39 0.002078115056660563 5.601388292885615E-6 0.0 2.632652497656239E-4 1.9604859025099653E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGCAGT 191960 0.0 43.051937 1 TCAACGC 192650 0.0 42.31845 12 CAACGCA 192615 0.0 42.281754 13 AGTGGTA 194420 0.0 42.162327 5 ACGCAGA 193060 0.0 42.122528 15 GTATCAA 195485 0.0 42.10067 9 ATCAACG 193575 0.0 42.09531 11 AACGCAG 193250 0.0 42.09508 14 GTGGTAT 195255 0.0 42.011986 6 GGTATCA 195610 0.0 41.992104 8 TGGTATC 195670 0.0 41.940132 7 CGCAGAG 193435 0.0 41.902447 16 TATCAAC 195710 0.0 41.788998 10 AGAGTAC 192620 0.0 41.672073 19 AGCAGTG 198320 0.0 41.62477 2 GCAGTGG 198240 0.0 41.560986 3 CAGTGGT 198695 0.0 41.333324 4 CAGAGTA 196870 0.0 41.267334 18 GCAGAGT 197055 0.0 41.164646 17 GTACATG 132435 0.0 40.876656 22 >>END_MODULE