SRR805446_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR805446_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	23317805
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	661002	2.8347522419027005	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATC	75360	0.3231865091932967	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGT	40717	0.1746176366085916	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCAG	27695	0.11877189984220213	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	253270	43.259666	1
TCAACGC	260540	42.209736	12
CAACGCA	261510	42.151253	13
GTGGTAT	260280	42.112724	6
GTATCAA	261090	42.086353	9
GGTATCA	261320	42.043278	8
AGTGGTA	261130	42.042854	5
ACGCAGA	262150	42.026894	15
AACGCAG	262335	42.008404	14
ATCAACG	261800	41.985962	11
TGGTATC	262095	41.92411	7
CGCAGAG	263190	41.866806	16
TATCAAC	262695	41.824074	10
AGAGTAC	262020	41.633846	19
AGCAGTG	265515	41.424778	2
CAGTGGT	265395	41.39349	4
GCAGTGG	265960	41.3377	3
CAGAGTA	264770	41.323788	18
GCAGAGT	267425	41.10788	17
GTACATG	168590	40.94015	22