SRR805444_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR805444_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	28051985
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	571297	2.036565326838725	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGT	52909	0.18861053861250818	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCAG	37072	0.13215464075002178	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATC	33359	0.11891850077632653	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCAACGC	248750	42.743217	12
CAACGCA	249475	42.724525	13
AAGCAGT	247815	42.72381	1
ATCAACG	249620	42.59064	11
AACGCAG	250630	42.512367	14
ACGCAGA	250635	42.489975	15
GTATCAA	250355	42.443134	9
GTGGTAT	249895	42.42942	6
GGTATCA	250800	42.3759	8
AGTGGTA	250750	42.3691	5
TATCAAC	251585	42.248154	10
CGCAGAG	252405	42.212517	16
TGGTATC	251835	42.204422	7
AGAGTAC	250555	41.980003	19
CAGAGTA	254310	41.52294	18
AGCAGTG	257215	41.398636	2
GCAGTGG	257635	41.29709	3
CAGTGGT	257525	41.28066	4
GCAGAGT	257700	41.238647	17
GAGTACA	169815	40.976067	20