SRR805429_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR805429_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1086428
Sequences flagged as poor quality	0
Sequence length	53
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	31861	2.9326379658845316	No Hit
AAGCAGTGGTATCAACGCAGAGAACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6422	0.591111422017842	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1826	0.16807372416763927	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCAGTG	1763	0.1622749045495882	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG	1365	0.1256410917244401	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTA	1279	0.11772524272202116	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	11610	44.813953	1
AGTGGTA	12030	43.112637	5
CAACGCA	12135	43.10754	13
TCAACGC	12130	43.105938	12
GTGGTAT	12040	43.096344	6
TGGTATC	12050	43.060585	7
ATCAACG	12160	43.018913	11
GCAGTGG	12105	42.923172	3
GGTATCA	12165	42.904644	8
AACGCAG	12240	42.776146	14
GTATCAA	12230	42.753475	9
CGCAGAG	12215	42.74826	16
AGCAGTG	12175	42.73429	2
CAGTGGT	12140	42.721992	4
ACGCAGA	12240	42.69935	15
TATCAAC	12305	42.473793	10
AGAGTAC	10185	42.177715	19
GAGTACT	5165	42.08616	20
ACATGGG	5820	41.99313	24
GTACTTT	5120	41.492188	22