SRR805420_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR805420_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18589801
Sequences flagged as poor quality	0
Sequence length	53
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	386333	2.078198685397439	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG	29794	0.16027067745372853	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCC	21864	0.11761287815829766	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCAGTG	21015	0.11304585777975784	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	171600	44.408978	1
TCAACGC	174240	43.339592	12
CAACGCA	174370	43.29919	13
AACGCAG	175215	43.0944	14
ATCAACG	175860	43.090015	11
AGTGGTA	175390	43.087578	5
GTGGTAT	175405	43.08389	6
ACGCAGA	175165	43.081207	15
GTATCAA	175860	43.051266	9
GGTATCA	176155	42.956486	8
TGGTATC	176440	42.820507	7
TATCAAC	176605	42.732597	10
CGCAGAG	176850	42.681366	16
AGCAGTG	179035	42.593628	2
AGAGTAC	175220	42.566086	19
GCAGTGG	179525	42.328144	3
CAGTGGT	179550	42.115456	4
CAGAGTA	177145	42.110165	18
GAGTACT	63310	41.87016	20
GCAGAGT	179560	41.768906	17