##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805419_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 17658967 Sequences flagged as poor quality 0 Sequence length 53 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 35.42230097604237 36.0 35.0 37.0 35.0 37.0 2 35.83460402865015 37.0 35.0 37.0 35.0 37.0 3 37.734355469377114 39.0 38.0 39.0 35.0 39.0 4 37.80334449914313 39.0 38.0 39.0 35.0 39.0 5 37.78574573473069 39.0 38.0 39.0 35.0 39.0 6 37.770193239502625 39.0 38.0 39.0 35.0 39.0 7 37.788984485898865 39.0 38.0 39.0 35.0 39.0 8 38.649061465486625 40.0 39.0 40.0 36.0 40.0 9 38.613710077152305 40.0 39.0 40.0 36.0 40.0 10 38.6110742491336 40.0 39.0 40.0 36.0 40.0 11 38.623903595266924 40.0 39.0 40.0 36.0 40.0 12 38.67955481201137 40.0 39.0 40.0 36.0 40.0 13 38.73407844298027 40.0 39.0 40.0 36.0 40.0 14 38.698009685391 40.0 39.0 40.0 36.0 40.0 15 38.64462156818119 40.0 39.0 40.0 36.0 40.0 16 38.48421614922322 40.0 39.0 40.0 35.0 40.0 17 38.54093016879187 40.0 39.0 40.0 35.0 40.0 18 38.463176243548105 40.0 39.0 40.0 35.0 40.0 19 38.464024707674014 40.0 39.0 40.0 35.0 40.0 20 38.38370653277737 40.0 38.0 40.0 35.0 40.0 21 38.369160381804896 40.0 38.0 40.0 35.0 40.0 22 38.312835909371145 40.0 38.0 40.0 35.0 40.0 23 38.239652523276135 40.0 38.0 40.0 34.0 40.0 24 38.28097073854887 40.0 38.0 40.0 35.0 40.0 25 38.273704231963286 40.0 38.0 40.0 35.0 40.0 26 38.19648895657373 40.0 38.0 40.0 34.0 40.0 27 38.24127889247429 40.0 38.0 40.0 35.0 40.0 28 38.223047871373225 40.0 38.0 40.0 35.0 40.0 29 38.153328730950115 40.0 38.0 40.0 34.0 40.0 30 38.03052539822969 40.0 38.0 40.0 34.0 40.0 31 38.02058359359299 40.0 38.0 40.0 34.0 40.0 32 37.969212581913766 40.0 38.0 40.0 34.0 40.0 33 37.90756684691692 40.0 38.0 40.0 34.0 40.0 34 37.88346639981829 40.0 38.0 40.0 34.0 40.0 35 37.80587488498053 40.0 38.0 40.0 33.0 40.0 36 37.74720423907016 40.0 38.0 40.0 33.0 40.0 37 37.705545856674405 40.0 38.0 40.0 33.0 40.0 38 37.61343950639921 40.0 38.0 40.0 33.0 40.0 39 37.59583400320076 40.0 38.0 40.0 33.0 40.0 40 37.50399080535119 40.0 37.0 40.0 33.0 40.0 41 37.47433238875185 40.0 37.0 40.0 33.0 40.0 42 37.41798316968371 40.0 37.0 40.0 33.0 40.0 43 37.32160720386419 40.0 37.0 40.0 33.0 40.0 44 37.2391505686601 40.0 37.0 40.0 32.0 40.0 45 37.113111033051936 40.0 37.0 40.0 32.0 40.0 46 37.023695666909624 39.0 36.0 40.0 31.0 40.0 47 36.837723293780435 39.0 36.0 40.0 31.0 40.0 48 36.8110640333605 39.0 36.0 40.0 31.0 40.0 49 36.67631538130175 39.0 36.0 40.0 31.0 40.0 50 36.60798494045547 39.0 36.0 40.0 31.0 40.0 51 36.485285860718804 39.0 35.0 40.0 31.0 40.0 52 36.32643098545912 39.0 35.0 40.0 30.0 40.0 53 36.1859312608716 38.0 35.0 40.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 12.0 11 29.0 12 65.0 13 135.0 14 211.0 15 487.0 16 1060.0 17 2005.0 18 3571.0 19 5774.0 20 9717.0 21 15383.0 22 23128.0 23 33243.0 24 45655.0 25 61009.0 26 79209.0 27 101255.0 28 126836.0 29 158306.0 30 195785.0 31 242523.0 32 301845.0 33 377566.0 34 487388.0 35 659398.0 36 957517.0 37 1550419.0 38 3195132.0 39 9024298.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 14.270557275519005 28.27340353487268 27.333631689781175 30.12240749982714 2 23.961599792332134 25.688846918395626 30.25182050569549 20.097732783576753 3 17.3451652070022 25.740412788584973 32.2049641975094 24.70945780690343 4 17.80936563276889 28.17192534535004 31.474972460167123 22.543736561713946 5 23.16628713333005 28.532439071889087 29.107891758334446 19.193382036446412 6 22.607268024228144 26.90267782934302 29.66335460052675 20.82669954590209 7 23.075630641361975 27.519905326285503 29.341263280009528 20.06320075234299 8 22.06535637107199 26.04085505114767 29.285433287235886 22.60835529054446 9 21.69838700077983 25.44271700604005 30.87341971928483 21.985476273895298 10 21.735240798626556 26.767047019228247 29.172901223497387 22.32481095864781 11 21.594422822127704 28.033361181319382 28.222556846048807 22.149659150504103 12 21.70912941849883 26.94627041321273 28.851076056713847 22.49352411157459 13 21.923196300213938 27.342199574867543 27.19793858836703 23.53666553655149 14 22.32874097335365 28.348175745500853 27.083690682473105 22.239392598672392 15 22.11000790703103 28.01436233501088 27.12490487127588 22.750724886682217 16 22.727575174697364 26.901664180016873 26.885038065929905 23.48572257935586 17 23.94476415296546 26.552062756558747 26.88132890219456 22.62184418828123 18 22.50142378090406 26.89363426524326 26.841354876533828 23.76358707731885 19 22.911238239473462 27.8630850830629 26.730340455361855 22.49533622210178 20 23.83972969653321 26.806024384099025 26.88800539691818 22.466240522449585 21 22.803672491148546 27.840320444565076 26.98251828660193 22.373488777684447 22 23.654673571789335 26.537645152176797 27.167682005408356 22.639999270625513 23 22.57589019788077 26.910634127126464 28.19877289537944 22.314702779613327 24 22.36708409953991 27.774501192510296 27.023692835486923 22.834721872462868 25 22.49524561657542 26.71303479982719 27.00387287659578 23.787846707001602 26 22.67296269368418 27.166940172661292 27.803053259004333 22.3570438746502 27 22.81981726337673 26.336240392770428 28.37618984168213 22.46775250217071 28 23.584969607791894 26.39768226533296 27.3539329905311 22.663415136344046 29 23.698832440198796 26.47101045038478 27.40208982779117 22.42806728162525 30 23.42552653278077 26.417456921460918 27.462529376718354 22.694487169039956 31 23.120168920413068 26.64474088433372 27.35077312279931 22.8843170724539 32 23.117139298125423 26.828681428534296 27.421292536533986 22.63288673680629 33 22.916113949360685 26.74653053035322 27.44932362125146 22.88803189903464 34 22.970024237544585 26.700304723373687 27.34356998345373 22.986101055628 35 23.077465403270757 26.760999100343753 27.381103322748153 22.780432173637337 36 22.93126206079891 26.699829044360296 27.432957998052775 22.935950896788018 37 23.002998986294045 26.754396222610303 27.233371012018992 23.009233779076656 38 23.168405037508705 26.813493677178286 27.340840491972152 22.677260793340857 39 22.9876583381123 26.73786637689509 27.385667576138513 22.88880770885409 40 23.045889377334472 26.76729052158034 27.227090916473202 22.959729184611987 41 23.052905642781937 26.840947151665212 27.390877393904184 22.715269811648668 42 22.920672539905645 26.747232723182506 27.467518343513525 22.864576393398323 43 22.963948004433103 26.767794514820714 27.294218285814793 22.974039194931393 44 23.124200866336068 26.696850387681227 27.323750024562592 22.855198721420113 45 22.97117945800567 26.59717864584038 27.436933315521795 22.99470858063215 46 22.984787275495787 26.666474884969205 27.277473251974477 23.07126458756053 47 23.009284744685235 26.930442760326805 27.22322885591213 22.83704363907583 48 22.956801493541494 26.64743073589752 27.3615325290545 23.034235241506483 49 23.066286946456156 26.761916481298144 27.139679234917875 23.03211733732783 50 23.177607161279592 26.776951335828418 27.235721092858945 22.809720410033044 51 23.067917845930623 26.682800868250105 27.26190608997684 22.98737519584243 52 23.151405175625506 26.76534816560901 26.97802198735634 23.10522467140915 53 23.181622118666397 26.802654991087532 27.059634915224656 22.956087975021415 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 9734.0 1 6149.0 2 2564.0 3 2193.0 4 1822.0 5 1943.5 6 2065.0 7 2377.0 8 3381.5 9 4074.0 10 5429.0 11 6784.0 12 9458.0 13 12132.0 14 16487.0 15 20842.0 16 29459.0 17 38076.0 18 51932.5 19 65789.0 20 88659.0 21 111529.0 22 173817.5 23 236106.0 24 233264.0 25 270489.5 26 310557.0 27 354992.0 28 399427.0 29 435599.0 30 471771.0 31 504206.5 32 536642.0 33 581743.0 34 626844.0 35 688774.5 36 750705.0 37 811215.5 38 871726.0 39 919858.0 40 967990.0 41 1010962.5 42 1087676.5 43 1121418.0 44 1142677.0 45 1163936.0 46 1175730.5 47 1187525.0 48 1184983.0 49 1182441.0 50 1168854.5 51 1155268.0 52 1120001.5 53 1084735.0 54 1031444.0 55 978153.0 56 908064.5 57 837976.0 58 759859.0 59 599181.0 60 516620.0 61 448803.0 62 380986.0 63 323643.5 64 266301.0 65 215390.0 66 164479.0 67 131715.5 68 98952.0 69 76095.0 70 53238.0 71 40090.0 72 26942.0 73 19623.5 74 12305.0 75 9058.0 76 4392.5 77 2974.0 78 2120.0 79 1266.0 80 1103.5 81 941.0 82 710.5 83 480.0 84 309.0 85 138.0 86 89.5 87 41.0 88 34.0 89 27.0 90 23.0 91 19.0 92 17.0 93 10.5 94 6.0 95 5.5 96 5.0 97 3.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 53 1.7658967E7 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.498155587909224 #Duplication Level Percentage of deduplicated Percentage of total 1 70.23629964354875 35.46803587318937 2 16.93324775526252 17.10195559507723 3 5.685860575731104 8.61376416013285 4 2.479997782469244 5.0094125550720685 5 1.277169907989779 3.2247362362931775 6 0.7441810601402891 2.2547862576323725 7 0.47228841677728384 1.6694785766950615 8 0.34421731573011066 1.390587165263328 9 0.25357228040609103 1.1524439221854956 >10 1.4021176998717362 12.712457424338 >50 0.09408742548913397 3.282664964019718 >100 0.0751563590781856 6.938323585921448 >500 0.0014889959738826747 0.48593627672439593 >1k 2.798226383736637E-4 0.2561488518014873 >5k 1.165296450484088E-5 0.05140727282971323 >10k+ 2.330592900968176E-5 0.3878612828241825 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 51803 0.2933523801250662 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.361699016709188E-5 0.0 0.0 0.0 0.0 2 9.626837175696631E-5 5.662845397468606E-6 0.0 0.0 0.0 3 9.626837175696631E-5 1.1325690794937212E-5 0.0 5.662845397468606E-6 5.662845397468606E-6 4 9.626837175696631E-5 1.1325690794937212E-5 0.0 1.1325690794937212E-5 2.2651381589874425E-5 5 4.4736478640001987E-4 1.1325690794937212E-5 0.0 1.1325690794937212E-5 2.8314226987343032E-5 6 4.530276317974885E-4 1.6988536192405818E-5 0.0 1.1325690794937212E-5 3.3977072384811636E-5 7 4.8134185878483154E-4 2.2651381589874425E-5 0.0 2.2651381589874425E-5 3.3977072384811636E-5 8 4.870047041823001E-4 2.2651381589874425E-5 0.0 3.3977072384811636E-5 5.096560857721745E-5 9 4.870047041823001E-4 2.8314226987343032E-5 0.0 3.3977072384811636E-5 6.229129937215467E-5 10 5.153189311696432E-4 2.8314226987343032E-5 0.0 3.3977072384811636E-5 7.361699016709188E-5 11 5.266446219645804E-4 2.8314226987343032E-5 0.0 3.3977072384811636E-5 7.361699016709188E-5 12 5.719473851443292E-4 3.3977072384811636E-5 0.0 3.3977072384811636E-5 7.927983556456049E-5 13 6.455643753114211E-4 3.3977072384811636E-5 0.0 4.530276317974885E-5 1.0759406255190352E-4 14 7.361699016709188E-4 3.3977072384811636E-5 0.0 5.096560857721745E-5 1.1891975334684072E-4 15 8.041240464405421E-4 3.3977072384811636E-5 0.0 5.096560857721745E-5 1.1891975334684072E-4 16 8.211125826329479E-4 3.3977072384811636E-5 0.0 5.096560857721745E-5 1.1891975334684072E-4 17 8.834038820051026E-4 3.9639917782280246E-5 0.0 5.096560857721745E-5 1.2458259874430935E-4 18 8.947295728000397E-4 3.9639917782280246E-5 0.0 5.6628453974686064E-5 1.2458259874430935E-4 19 9.173809543899142E-4 4.530276317974885E-5 0.0 6.229129937215467E-5 1.4723398033418376E-4 20 9.570208721721944E-4 4.530276317974885E-5 0.0 6.229129937215467E-5 1.5289682573165237E-4 21 0.0010136493261468805 4.530276317974885E-5 0.0 7.361699016709188E-5 1.755482073215268E-4 22 0.0010249750169418178 4.530276317974885E-5 0.0 7.361699016709188E-5 1.755482073215268E-4 23 0.0010306378623392864 4.530276317974885E-5 0.0 7.361699016709188E-5 2.0952527970633842E-4 24 0.0010419635531342235 4.530276317974885E-5 0.0 7.927983556456049E-5 2.1518812510380703E-4 25 0.0010532892439291607 4.530276317974885E-5 0.0 7.927983556456049E-5 2.2651381589874426E-4 26 0.0010985920071089096 4.530276317974885E-5 0.0 7.927983556456049E-5 2.2651381589874426E-4 27 0.0011382319248911899 4.530276317974885E-5 0.0 8.494268096202909E-5 2.3217666129621287E-4 28 0.0011665461518785328 4.530276317974885E-5 0.0 9.06055263594977E-5 2.3783950669368145E-4 29 0.0012571516782380306 4.530276317974885E-5 0.0 9.06055263594977E-5 2.4350235209115006E-4 30 0.001336431513802591 5.096560857721745E-5 0.0 9.06055263594977E-5 2.4350235209115006E-4 31 0.0013987228131747457 5.096560857721745E-5 0.0 9.06055263594977E-5 2.4350235209115006E-4 32 0.0014440255763544946 5.096560857721745E-5 0.0 9.626837175696631E-5 2.548280428860873E-4 33 0.001523305411919055 5.096560857721745E-5 0.0 9.626837175696631E-5 2.661537336810245E-4 34 0.0015742710204962726 5.096560857721745E-5 0.0 1.019312171544349E-4 2.661537336810245E-4 35 0.001681865083048176 5.096560857721745E-5 0.0 1.019312171544349E-4 2.944679606683675E-4 36 0.0017215050008304563 5.096560857721745E-5 0.0 1.019312171544349E-4 3.1145649686077333E-4 37 0.0017894591456000795 5.096560857721745E-5 0.0 1.019312171544349E-4 3.1145649686077333E-4 38 0.0019083788989469202 5.096560857721745E-5 0.0 1.1325690794937213E-4 3.2278218765571055E-4 39 0.0020669385700760414 5.6628453974686064E-5 0.0 1.2458259874430935E-4 3.2844503305317913E-4 40 0.002146218405640602 5.6628453974686064E-5 0.0 1.2458259874430935E-4 3.3410787845064777E-4 41 0.0022198353958076938 5.6628453974686064E-5 0.0 1.4157113493671515E-4 3.567592600405222E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGCAGT 29450 0.0 35.142273 1 TCAACGC 39005 0.0 27.087809 12 CAACGCA 39005 0.0 27.075758 13 AGCAGTG 39780 0.0 26.873177 2 ACGCAGA 39560 0.0 26.672144 15 AACGCAG 39700 0.0 26.643198 14 AGTGGTA 39790 0.0 26.577028 5 GGTATCA 40310 0.0 26.263332 8 GTGGTAT 40580 0.0 26.059635 6 GTATCAA 40755 0.0 26.011164 9 CGCAGAG 40690 0.0 25.966087 16 ATCAACG 40820 0.0 25.946716 11 GCAGTGG 41155 0.0 25.941074 3 TGGTATC 40875 0.0 25.848564 7 TATCAAC 41940 0.0 25.237003 10 AGAGTAC 41795 0.0 25.02656 19 CAGTGGT 43650 0.0 24.329094 4 CAGAGTA 43890 0.0 23.944408 18 GCAGAGT 44425 0.0 23.751266 17 GTACATG 30070 0.0 22.530928 22 >>END_MODULE