SRR805418_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR805418_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	24801355
Sequences flagged as poor quality	0
Sequence length	53
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	743327	2.997122536248524	No Hit
AAGCAGTGGTATCAAAGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	135307	0.5455629339606647	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG	33925	0.13678688120064408	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTA	32239	0.12998886552771008	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTG	28330	0.11422762990167272	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	303920	45.232395	1
GTGGTAT	310055	44.01906	6
AGTGGTA	311055	43.963673	5
GTATCAA	310805	43.913593	9
GGTATCA	310775	43.904224	8
AGCAGTG	313375	43.84367	2
TGGTATC	311295	43.833904	7
TCAACGC	264565	43.75078	12
CAACGCA	264675	43.73171	13
GCAGTGG	314070	43.70325	3
AACGCAG	265440	43.581768	14
ACGCAGA	265235	43.539253	15
ATCAACG	266155	43.509716	11
AGAGTAC	309325	43.424004	19
GAGTACT	135965	43.363472	20
CGCAGAG	266810	43.27431	16
CAGTGGT	316305	43.263683	4
TATCAAC	268020	43.081577	10
CAGAGTA	312865	43.06712	18
GCAGAGT	314760	43.027332	17