SRR805414_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR805414_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20896146
Sequences flagged as poor quality	0
Sequence length	53
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	460667	2.2045548494923417	No Hit
AAGCAGTGGTATCAAAGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	88131	0.42175719867194644	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG	60419	0.2891394422684451	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCAGTG	37095	0.17752077344788844	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCC	24782	0.1185960320147074	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	243560	44.38042	1
GTGGTAT	247870	43.35369	6
AGTGGTA	248790	43.286884	5
TGGTATC	248255	43.27605	7
GTATCAA	248455	43.253506	9
GGTATCA	248515	43.23928	8
AGAGTAC	244865	43.15347	19
TCAACGC	210320	43.074764	12
CAACGCA	210395	43.063877	13
AGCAGTG	252430	42.890785	2
AACGCAG	211470	42.844967	14
ACGCAGA	211235	42.84368	15
GCAGTGG	252995	42.74948	3
ATCAACG	212130	42.720524	11
CGCAGAG	212440	42.594025	16
GCAGAGT	251135	42.510265	17
CAGAGTA	250025	42.497852	18
CAGTGGT	253665	42.49575	4
GAGTACT	87510	42.483143	20
GTACTTT	87080	42.42036	22