SRR805411_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR805411_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	16264507
Sequences flagged as poor quality	0
Sequence length	53
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	340268	2.0920892345522675	No Hit
AAGCAGTGGTATCAACGCAGAGAACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	52551	0.3231023233596936	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCC	27726	0.1704693539127869	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG	21935	0.1348642169110936	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	183015	44.802994	1
TCAACGC	187855	43.846317	12
CAACGCA	188275	43.81341	13
GTGGTAT	186655	43.7505	6
AGTGGTA	186845	43.71985	5
ACGCAGA	188630	43.65994	15
GTATCAA	187385	43.656563	9
GGTATCA	187515	43.633816	8
AACGCAG	189100	43.633446	14
TGGTATC	187160	43.61739	7
ATCAACG	189055	43.551853	11
CGCAGAG	189270	43.483753	16
TATCAAC	189005	43.3147	10
AGCAGTG	190255	43.22775	2
GCAGTGG	190710	43.11352	3
CAGTGGT	190745	42.856747	4
AGAGTAC	163040	42.765274	19
CAGAGTA	164885	42.420715	18
GCAGAGT	167085	42.120956	17
ACATGGG	125115	42.0902	24