##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805409_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 20186135 Sequences flagged as poor quality 0 Sequence length 53 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 34.16949084111446 35.0 33.0 35.0 32.0 35.0 2 35.138853178183936 35.0 35.0 37.0 35.0 37.0 3 37.665368085569625 39.0 37.0 39.0 35.0 39.0 4 37.678647249708774 39.0 37.0 39.0 35.0 39.0 5 37.63850583581255 39.0 37.0 39.0 35.0 39.0 6 37.565749609818816 39.0 37.0 39.0 35.0 39.0 7 37.558275519310655 39.0 37.0 39.0 35.0 39.0 8 38.561523293092016 40.0 38.0 40.0 36.0 40.0 9 38.52513658508674 40.0 38.0 40.0 36.0 40.0 10 38.34950875935388 40.0 38.0 40.0 35.0 40.0 11 38.450565202303466 40.0 38.0 40.0 35.0 40.0 12 38.52396439437267 40.0 38.0 40.0 36.0 40.0 13 38.577654811086916 40.0 39.0 40.0 36.0 40.0 14 38.55064102167156 40.0 39.0 40.0 35.0 40.0 15 38.528176741114635 40.0 39.0 40.0 35.0 40.0 16 38.47697570634497 40.0 38.0 40.0 35.0 40.0 17 38.41058583032363 40.0 38.0 40.0 35.0 40.0 18 38.38601366730184 40.0 38.0 40.0 35.0 40.0 19 38.3447852696913 40.0 38.0 40.0 35.0 40.0 20 38.193910226004135 40.0 38.0 40.0 34.0 40.0 21 38.14201842006902 40.0 38.0 40.0 34.0 40.0 22 38.122515379987306 40.0 38.0 40.0 34.0 40.0 23 37.86672629505351 40.0 38.0 40.0 34.0 40.0 24 37.75859474832602 40.0 38.0 40.0 33.0 40.0 25 37.87770288864114 40.0 38.0 40.0 34.0 40.0 26 38.01854946476876 40.0 38.0 40.0 34.0 40.0 27 38.05569783418173 40.0 38.0 40.0 34.0 40.0 28 37.99514374594245 40.0 38.0 40.0 34.0 40.0 29 37.95537803546841 40.0 38.0 40.0 34.0 40.0 30 37.93993654555466 40.0 38.0 40.0 34.0 40.0 31 37.98288805657943 40.0 38.0 40.0 34.0 40.0 32 37.914624815498364 40.0 38.0 40.0 33.0 40.0 33 37.94201698343937 40.0 38.0 40.0 34.0 40.0 34 37.94164177540674 40.0 38.0 40.0 33.0 40.0 35 37.91946011457865 40.0 38.0 40.0 33.0 40.0 36 37.904596595633585 40.0 38.0 40.0 33.0 40.0 37 37.75625755004611 40.0 38.0 40.0 33.0 40.0 38 37.70119381446721 40.0 38.0 40.0 33.0 40.0 39 37.70861271858134 40.0 38.0 40.0 33.0 40.0 40 37.621187909423966 40.0 37.0 40.0 33.0 40.0 41 37.55173905257247 40.0 37.0 40.0 33.0 40.0 42 37.51644457941057 40.0 37.0 40.0 33.0 40.0 43 37.47333632713742 40.0 37.0 40.0 33.0 40.0 44 37.3850092154838 40.0 37.0 40.0 33.0 40.0 45 37.27954231951783 40.0 37.0 40.0 32.0 40.0 46 37.2002302075162 40.0 36.0 40.0 32.0 40.0 47 37.09916806758699 40.0 36.0 40.0 32.0 40.0 48 36.94879728090593 40.0 36.0 40.0 31.0 40.0 49 36.877954843757855 39.0 36.0 40.0 31.0 40.0 50 36.80515695550436 39.0 36.0 40.0 31.0 40.0 51 36.706904516392065 39.0 35.0 40.0 31.0 40.0 52 36.56217364047154 39.0 35.0 40.0 31.0 40.0 53 36.07302101169937 38.0 35.0 40.0 30.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 16.0 13 56.0 14 159.0 15 380.0 16 851.0 17 1793.0 18 3609.0 19 6544.0 20 10967.0 21 17609.0 22 26394.0 23 37420.0 24 52282.0 25 70718.0 26 92421.0 27 120283.0 28 151847.0 29 192448.0 30 237393.0 31 294644.0 32 364459.0 33 460078.0 34 594380.0 35 807893.0 36 1170689.0 37 1957497.0 38 3551247.0 39 9962055.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 9.69298976748149 43.55212624903182 31.08472226109654 15.670161722390146 2 31.40445161988662 41.616441185992265 15.134432619221064 11.844674574900049 3 34.687363380855224 25.842455725179686 21.741967939875565 17.72821295408953 4 22.762787428103497 27.24403160882457 21.083793405721305 28.90938755735063 5 19.85585155355396 33.19384815369559 25.363825219637143 21.586475073113302 6 26.854343340119346 25.254250008731237 23.655707246582867 24.23569940456655 7 22.902452599271726 25.071337331292 29.575691433748958 22.450518635687317 8 24.862426611136804 26.40456927490082 26.401879309734134 22.33112480422825 9 26.399803627588938 25.300167664587597 26.362718767114163 21.937309940709305 10 22.048297011785564 26.703120731135506 29.674283858698065 21.57429839838087 11 21.47641438046461 31.04273799813585 25.950975756379318 21.529871865020223 12 21.596615696863218 26.062220430012978 30.308798588734298 22.032365284389506 13 21.526627063576065 26.63431607883332 25.60467370301447 26.234383154576147 14 21.880082541804065 31.199132473849005 25.289630729210916 21.63115425513601 15 21.82652597934176 30.702167601673132 25.256216705179074 22.215089713806037 16 22.082305503257558 26.067169371452238 25.402539911677003 26.447985213613208 17 26.68924982419864 25.811642496198505 25.51169404147946 21.987413638123396 18 22.0573230090852 25.758957819315086 25.31096220252168 26.872756969078033 19 22.173244159914717 30.770174676826446 25.22715220125101 21.82942896200783 20 26.968550443163092 26.152846991264056 25.302619842778224 21.57598272279463 21 22.50044399286936 30.33401886988272 25.177509216103033 21.988027921144884 22 26.587244165363998 26.02604213238443 25.540094723432695 21.846618978818878 23 22.168265495103444 26.008634144178664 30.10740292780168 21.715697432916205 24 22.421097451295157 30.088498863204865 25.17562178198055 22.31478190351942 25 21.938216503555534 26.142166392922668 25.26747195537927 26.652145148142527 26 22.189408720391494 28.50644761862536 27.482933211335403 21.82121044964774 27 22.474723368292146 25.45908367302607 29.938569220903354 22.127623737778432 28 24.938449088941496 25.849965830506928 27.27260072321918 21.938984357332398 29 25.110017346064513 25.79141078765202 27.2166563832056 21.881915483077865 30 25.217492105348548 25.498828775295518 27.180042142787613 22.10363697656832 31 24.112183932189097 26.256532020617122 27.35490474030814 22.27637930688564 32 23.5571346372151 26.51650749388132 27.54773511620724 22.37862275269634 33 23.513981254955443 26.001867123151605 27.618318216934547 22.8658334049584 34 22.982106282356675 26.399154667300106 27.81549811293742 22.8032409374058 35 22.943084448806076 26.33175692127294 28.06215256164689 22.66300606827409 36 23.200994147715747 26.06510359709771 27.928179416218114 22.805722838968432 37 23.13715825243416 26.395989128181295 27.827664879879183 22.63918773950536 38 23.186211724037314 26.37320120964216 27.98861198540483 22.451975080915687 39 23.271924021116476 26.06142285286411 27.908076508950323 22.758576617069092 40 22.947691571467246 26.64208378671796 27.703089273900126 22.70713536791466 41 23.186687297989437 26.595477539410094 27.731014381901243 22.486820780699226 42 23.287850794617196 26.25151372464318 27.67988522815289 22.78075025258674 43 23.04992510948728 26.64214818735731 27.823642316867492 22.484284386287914 44 23.25807292976095 26.395013210800382 27.81871319100957 22.528200668429097 45 23.42975017258133 25.984260979132458 27.7322974407929 22.85369140749331 46 23.06469762537504 26.33365921708143 27.672989405847133 22.928653751696398 47 23.119121119520898 26.361460477699172 27.75284124474546 22.766577158034462 48 23.130698372917845 26.08309614495296 27.70347567773623 23.082729804392965 49 22.938051291146124 26.56383700990804 27.614840582409663 22.88327111653618 50 23.30061202899911 26.448832329715422 27.63222380113875 22.618331840146716 51 23.33914342691159 26.063939431694084 27.64387536296572 22.95304177842861 52 23.323167114457522 26.41403616888523 27.466407016499193 22.796389700158056 53 23.45109155368276 26.40535694425902 27.38403859877089 22.75951290328733 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 13903.0 1 8270.5 2 2638.0 3 2144.0 4 1650.0 5 1626.0 6 1602.0 7 1783.0 8 2375.5 9 2787.0 10 3866.0 11 4945.0 12 6933.5 13 8922.0 14 12465.5 15 16009.0 16 22867.0 17 29725.0 18 40890.5 19 52056.0 20 71146.5 21 90237.0 22 272622.5 23 455008.0 24 351228.0 25 270420.0 26 293392.0 27 329879.5 28 366367.0 29 410313.5 30 454260.0 31 493099.5 32 531939.0 33 588862.5 34 645786.0 35 718273.0 36 790760.0 37 859019.5 38 927279.0 39 986025.5 40 1044772.0 41 1104469.5 42 1211763.0 43 1259359.0 44 1306675.0 45 1353991.0 46 1373654.0 47 1393317.0 48 1399872.0 49 1406427.0 50 1398672.5 51 1390918.0 52 1359647.0 53 1328376.0 54 1271143.0 55 1213910.0 56 1144472.5 57 1075035.0 58 962053.0 59 738260.5 60 627450.0 61 537711.0 62 447972.0 63 373643.5 64 299315.0 65 240781.0 66 182247.0 67 143063.0 68 103879.0 69 79534.0 70 55189.0 71 41075.0 72 26961.0 73 20147.5 74 13334.0 75 9852.0 76 4616.5 77 2863.0 78 2129.0 79 1395.0 80 1026.0 81 657.0 82 462.5 83 268.0 84 180.0 85 92.0 86 71.5 87 51.0 88 38.5 89 26.0 90 21.0 91 16.0 92 17.0 93 11.5 94 5.0 95 5.0 96 5.0 97 3.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 53 2.0186135E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.49881109828284 #Duplication Level Percentage of deduplicated Percentage of total 1 70.71205284996337 35.0016254639213 2 15.833513247424225 15.674801625128213 3 5.427727582316887 8.059981868701291 4 2.4644730324546624 4.879539403611425 5 1.3972535217248179 3.45811940641336 6 0.9009529509705181 2.6757659957118096 7 0.5843938899849694 2.024876193714968 8 0.4444984240401863 1.7601714820039687 9 0.33602416222499143 1.496951687739024 >10 1.7484584844139335 15.369161963245642 >50 0.10544105679895815 3.5833682887150142 >100 0.043904917182344766 3.555120761946679 >500 8.393376166890196E-4 0.27418894514969494 >1k 3.550818025584132E-4 0.29087588745802617 >5k 5.066412768191366E-5 0.17028057641131003 >10k+ 6.079695321829322E-5 1.7251704501282847 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 271681 1.345879238398039 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG 22353 0.11073442241419668 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4861686003784281E-5 4.953895334594761E-6 0.0 0.0 4.953895334594761E-6 2 3.764960454292018E-4 4.953895334594761E-6 0.0 0.0 4.953895334594761E-6 3 3.764960454292018E-4 4.953895334594761E-6 0.0 0.0 4.953895334594761E-6 4 3.963116267675808E-4 4.953895334594761E-6 0.0 0.0 9.907790669189521E-6 5 4.0126552210217555E-4 4.953895334594761E-6 0.0 0.0 1.9815581338379043E-5 6 4.0126552210217555E-4 4.953895334594761E-6 0.0 0.0 1.9815581338379043E-5 7 4.0126552210217555E-4 4.953895334594761E-6 0.0 4.953895334594761E-6 1.9815581338379043E-5 8 4.0126552210217555E-4 4.953895334594761E-6 0.0 9.907790669189521E-6 2.9723372007568562E-5 9 4.2108110344055464E-4 9.907790669189521E-6 0.0 9.907790669189521E-6 2.9723372007568562E-5 10 4.3098889410974413E-4 9.907790669189521E-6 0.0 9.907790669189521E-6 2.9723372007568562E-5 11 4.3098889410974413E-4 9.907790669189521E-6 0.0 9.907790669189521E-6 5.449284868054236E-5 12 4.359427894443389E-4 9.907790669189521E-6 0.0 1.9815581338379043E-5 6.935453468432664E-5 13 4.607122661173127E-4 9.907790669189521E-6 0.0 2.47694766729738E-5 7.43084300189214E-5 14 4.904356381248813E-4 9.907790669189521E-6 0.0 2.9723372007568562E-5 7.926232535351617E-5 15 5.300668008016393E-4 9.907790669189521E-6 0.0 2.9723372007568562E-5 7.926232535351617E-5 16 5.399745914708288E-4 9.907790669189521E-6 0.0 2.9723372007568562E-5 8.421622068811093E-5 17 5.449284868054236E-4 1.4861686003784281E-5 0.0 2.9723372007568562E-5 8.917011602270569E-5 18 5.746518588129922E-4 1.4861686003784281E-5 0.0 3.467726734216332E-5 9.412401135730044E-5 19 5.845596494821817E-4 1.4861686003784281E-5 0.0 3.467726734216332E-5 9.90779066918952E-5 20 5.99421335485966E-4 1.9815581338379043E-5 0.0 3.467726734216332E-5 1.0898569736108472E-4 21 6.241908121589398E-4 1.9815581338379043E-5 0.0 4.458505801135284E-5 1.23847383364869E-4 22 6.340986028281294E-4 1.9815581338379043E-5 0.0 4.458505801135284E-5 1.2880127869946376E-4 23 6.539141841665083E-4 1.9815581338379043E-5 0.0 4.458505801135284E-5 1.486168600378428E-4 24 7.084070328470507E-4 1.9815581338379043E-5 0.0 4.458505801135284E-5 1.486168600378428E-4 25 7.331765095200245E-4 1.9815581338379043E-5 0.0 4.95389533459476E-5 1.486168600378428E-4 26 7.728076721967826E-4 1.9815581338379043E-5 0.0 4.95389533459476E-5 1.5852465070703234E-4 27 8.718855788886777E-4 1.9815581338379043E-5 0.0 5.449284868054236E-5 1.6347854604162708E-4 28 9.016089508962463E-4 1.9815581338379043E-5 0.0 5.449284868054236E-5 1.8329412738000612E-4 29 0.0010105946482573311 1.9815581338379043E-5 0.0 5.449284868054236E-5 1.882480227146009E-4 30 0.0010452719155994944 1.9815581338379043E-5 0.0 6.440063934973188E-5 1.981558133837904E-4 31 0.0012137043569757163 1.9815581338379043E-5 0.0 6.440063934973188E-5 1.981558133837904E-4 32 0.001302874472998422 3.9631162676758085E-5 0.0 7.926232535351617E-5 2.0806360405297992E-4 33 0.0013821367983519381 3.9631162676758085E-5 0.0 7.926232535351617E-5 2.1797139472216944E-4 34 0.0014366296470324804 4.458505801135284E-5 0.0 8.421622068811093E-5 2.1797139472216944E-4 35 0.0016050620884087022 4.458505801135284E-5 0.0 8.917011602270569E-5 2.1797139472216944E-4 36 0.0016793705184276237 4.458505801135284E-5 0.0 9.90779066918952E-5 2.3283308072595372E-4 37 0.0018279873784654665 4.458505801135284E-5 0.0 1.0403180202648996E-4 2.4274087139514324E-4 38 0.0019270652851573616 4.458505801135284E-5 0.0 1.0403180202648996E-4 2.4274087139514324E-4 39 0.002001373715176283 4.458505801135284E-5 0.0 1.0898569736108472E-4 2.47694766729738E-4 40 0.002105405517202773 4.95389533459476E-5 0.0 1.3375517403405854E-4 2.5760255739892753E-4 41 0.0022391606912368317 4.95389533459476E-5 0.0 1.3870906936865328E-4 2.9227982474109085E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGCAGT 107125 0.0 42.167282 1 TCAACGC 107510 0.0 42.167103 12 CAACGCA 107565 0.0 42.149906 13 AACGCAG 108505 0.0 41.786922 14 ATCAACG 108710 0.0 41.734062 11 ACGCAGA 108595 0.0 41.728485 15 GGTATCA 109040 0.0 41.407326 8 GTATCAA 109310 0.0 41.3201 9 GTGGTAT 108790 0.0 41.30375 6 AGTGGTA 109120 0.0 41.211143 5 CGCAGAG 109945 0.0 41.194736 16 TGGTATC 109365 0.0 41.144608 7 TATCAAC 110265 0.0 40.96862 10 AGAGTAC 108285 0.0 40.78021 19 CAGAGTA 111255 0.0 39.84787 18 GCAGTGG 113805 0.0 39.799572 3 CAGTGGT 113080 0.0 39.799126 4 AGCAGTG 114435 0.0 39.67082 2 GCAGAGT 113070 0.0 39.59481 17 GAGTACT 46665 0.0 39.45623 20 >>END_MODULE