##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805405_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 17109872 Sequences flagged as poor quality 0 Sequence length 53 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.79976314258809 35.0 32.0 37.0 28.0 37.0 2 35.035469230862745 35.0 35.0 37.0 33.0 37.0 3 37.622399045416586 39.0 37.0 39.0 35.0 39.0 4 37.832602721984124 39.0 37.0 39.0 35.0 39.0 5 37.7951504254386 39.0 37.0 39.0 35.0 39.0 6 37.88816503127551 39.0 38.0 39.0 35.0 39.0 7 37.76892498085316 39.0 37.0 39.0 35.0 39.0 8 38.87248636342808 40.0 39.0 40.0 36.0 40.0 9 38.89842185844523 40.0 39.0 40.0 36.0 40.0 10 38.53681062020803 40.0 38.0 40.0 36.0 40.0 11 38.712277157888735 40.0 39.0 40.0 36.0 40.0 12 38.72911913075679 40.0 39.0 40.0 36.0 40.0 13 38.85855376358163 40.0 39.0 40.0 36.0 40.0 14 38.82963262378585 40.0 39.0 40.0 36.0 40.0 15 38.860158451214595 40.0 39.0 40.0 36.0 40.0 16 38.817739372918744 40.0 39.0 40.0 36.0 40.0 17 38.64158843502745 40.0 39.0 40.0 36.0 40.0 18 38.644936151480266 40.0 39.0 40.0 36.0 40.0 19 38.64235565292365 40.0 39.0 40.0 36.0 40.0 20 38.525371843810404 40.0 39.0 40.0 36.0 40.0 21 38.42526069160541 40.0 39.0 40.0 35.0 40.0 22 38.44540111112462 40.0 39.0 40.0 35.0 40.0 23 38.11659105339888 40.0 38.0 40.0 34.0 40.0 24 37.809197462143494 40.0 38.0 40.0 34.0 40.0 25 38.106075428267374 40.0 38.0 40.0 34.0 40.0 26 38.177425348360295 40.0 38.0 40.0 34.0 40.0 27 38.16420572871615 40.0 38.0 40.0 35.0 40.0 28 38.19332388927281 40.0 38.0 40.0 35.0 40.0 29 38.156658214626034 40.0 38.0 40.0 34.0 40.0 30 38.031689483124126 40.0 38.0 40.0 34.0 40.0 31 37.85543866137631 40.0 38.0 40.0 34.0 40.0 32 37.84842440668171 40.0 38.0 40.0 33.0 40.0 33 37.83626721462323 40.0 38.0 40.0 33.0 40.0 34 37.804191580159106 40.0 38.0 40.0 33.0 40.0 35 37.70916632222614 40.0 38.0 40.0 33.0 40.0 36 37.62413050196986 40.0 37.0 40.0 33.0 40.0 37 37.45562012386767 40.0 37.0 40.0 33.0 40.0 38 37.27942371515111 40.0 37.0 40.0 33.0 40.0 39 30.53675620717677 38.0 30.0 40.0 3.0 40.0 40 32.54248833655798 38.0 29.0 40.0 15.0 40.0 41 34.8474839554615 38.0 30.0 40.0 25.0 40.0 42 36.06514449669758 38.0 35.0 40.0 30.0 40.0 43 36.483162702795205 39.0 35.0 40.0 31.0 40.0 44 36.591278181391424 39.0 35.0 40.0 31.0 40.0 45 36.60250690361681 39.0 35.0 40.0 31.0 40.0 46 36.38350292743277 39.0 35.0 40.0 30.0 40.0 47 36.26949552866322 39.0 35.0 40.0 30.0 40.0 48 36.093949972273315 38.0 35.0 40.0 30.0 40.0 49 36.35415618538818 39.0 35.0 40.0 30.0 40.0 50 36.389514135465184 39.0 35.0 40.0 31.0 40.0 51 36.32235927890051 39.0 35.0 40.0 30.0 40.0 52 36.13605192370814 39.0 35.0 40.0 30.0 40.0 53 35.84602865526989 38.0 35.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 10.0 13 22.0 14 90.0 15 262.0 16 601.0 17 1137.0 18 2322.0 19 4115.0 20 7129.0 21 12123.0 22 18273.0 23 26988.0 24 38701.0 25 53619.0 26 71941.0 27 94190.0 28 122336.0 29 157104.0 30 200299.0 31 257818.0 32 333651.0 33 443933.0 34 618133.0 35 916439.0 36 1496620.0 37 2835414.0 38 3980325.0 39 5416275.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 10.288680125719234 39.33844741795847 26.258028113828086 24.114844342494205 2 26.84899688320287 42.11696615848441 15.307303292508559 15.726733665804163 3 32.332503714814465 26.807950404304602 20.336405789593282 20.52314009128765 4 20.738863505232537 25.234274107953585 21.938872482506007 32.087989904307875 5 19.730457364029373 33.43771946394456 25.38567208451355 21.44615108751252 6 28.742611283123566 24.772756920682983 23.684408626785753 22.800223169407698 7 22.40874157328588 24.424028420551597 31.661581103587448 21.505648902575075 8 28.005013713720363 25.932794821609416 24.991244820534018 21.070946644136203 9 28.44508129575721 24.981583731310206 25.535930368152375 21.03740460478021 10 20.994306678623897 25.777475132484916 32.14403357313252 21.08418461575867 11 20.644596289206604 33.3140598597114 25.02636489624236 21.014978954839638 12 20.613023873001506 25.464229071965004 32.52204925904764 21.40069779598585 13 20.596881145574905 25.846487922294216 24.94473950477245 28.611891427358426 14 21.16910050525217 33.527544799867584 24.426027266597902 20.87732742828234 15 20.92011559174727 33.108120271151066 24.479867529108343 21.491896607993326 16 21.29167886235502 25.30418696294163 24.6115984970548 28.79253567764855 17 29.10124634480024 25.1384639230498 24.594731041821937 21.165558690328016 18 21.121736036365437 25.352778793435743 24.691260109952896 28.83422506024592 19 21.379236501593933 32.90187091989934 24.576829096091426 21.1420634824153 20 29.240651245082372 25.497443814892364 24.502415915209653 20.759489024815615 21 21.520938321455592 32.75171783868401 24.696543609443715 21.030800230416684 22 28.70296750320517 25.062010984068145 25.02974890753128 21.20527260519541 23 21.29152690329887 25.43411195595151 32.271287593501576 21.003073547248043 24 21.2769329893292 32.27349684439486 24.93840398104673 21.511166185229204 25 21.00603674884301 25.291024970847236 24.913634654893972 28.789303625415783 26 21.289165693349428 28.931151559754507 28.811892923570674 20.96778982332539 27 21.739519734571946 24.830799435553928 32.329774296382816 21.099906533491307 28 25.09623099459774 25.008924672259386 28.620202418814124 21.274641914328758 29 25.27196579845834 25.205565535499037 28.46985062190997 21.05261804413265 30 25.199557308201953 24.96976014782577 28.564299019887468 21.26638352408481 31 23.8090559648839 25.68332480804065 28.844289425426446 21.663329801649013 32 23.04757744534851 26.246151929131905 29.06223962400186 21.644031001517718 33 22.900071958457666 25.78001167980684 29.24334559603953 22.07657076569597 34 22.39834991167672 25.90716634233149 29.34634461321511 22.34813913277668 35 22.30750761899329 25.940433686470595 29.512435861589147 22.239622832946967 36 22.319646809748196 25.886961632442368 29.611349517985875 22.18204203982356 37 22.541489497992735 25.962117074867656 29.39203168790509 22.10436173923452 38 22.65438338755544 26.084742188603165 29.37692345097614 21.883950972865257 39 19.468859848863858 38.68304800877528 24.09826911621548 17.74982302614537 40 22.3268005745455 26.20927847969874 29.344474347908623 22.119446597847137 41 22.550344035303127 26.295205481373564 29.24630879763449 21.908141685688822 42 22.57507829398139 26.099710155634128 29.317174319013024 22.008037231371453 43 22.38201431314039 26.17804504908044 29.511804647048205 21.928135990730965 44 22.641139571353893 26.045425705113402 29.33214813062307 21.981286592909637 45 22.66065462091125 25.724342064043494 29.464516157689545 22.150487157355705 46 22.62286941714117 25.78996499798479 29.268296104143854 22.31886948073019 47 22.45730418088458 26.054946524439227 29.277513005357374 22.21023628931882 48 22.386076295602912 25.947318600630094 29.2592253174074 22.407379786359595 49 22.227974586835014 26.191382378547306 29.202772528046967 22.37787050657071 50 22.674196510646016 26.26040101293569 28.987078336997495 22.078324139420797 51 22.62487410776656 26.001474470411 29.182620419369588 22.191031002452853 52 22.673939349166375 26.1065015565283 28.992572241335296 22.22698685297003 53 23.117215605119664 26.299425267471317 28.46642569856747 22.11693342884155 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 8576.0 1 5240.0 2 1904.0 3 1564.5 4 1225.0 5 1340.5 6 1456.0 7 1744.5 8 2498.0 9 2963.0 10 4224.0 11 5485.0 12 7804.0 13 10123.0 14 12672.5 15 15222.0 16 21514.5 17 27807.0 18 37125.0 19 46443.0 20 66038.0 21 85633.0 22 360516.5 23 635400.0 24 446115.0 25 269399.0 26 281968.0 27 313570.5 28 345173.0 29 374518.5 30 403864.0 31 429575.0 32 455286.0 33 501305.0 34 547324.0 35 610320.0 36 673316.0 37 733142.5 38 792969.0 39 848332.5 40 903696.0 41 945832.0 42 1020411.5 43 1052855.0 44 1078078.5 45 1103302.0 46 1115472.0 47 1127642.0 48 1134257.0 49 1140872.0 50 1122099.0 51 1103326.0 52 1074927.5 53 1046529.0 54 1006532.5 55 966536.0 56 919829.5 57 873123.0 58 782593.0 59 608266.0 60 524469.0 61 451512.0 62 378555.0 63 316446.5 64 254338.0 65 206337.0 66 158336.0 67 125839.5 68 93343.0 69 72078.5 70 50814.0 71 38227.5 72 25641.0 73 19336.0 74 13031.0 75 9851.0 76 4863.0 77 3055.0 78 2238.5 79 1422.0 80 1052.0 81 682.0 82 498.0 83 314.0 84 231.0 85 148.0 86 100.0 87 52.0 88 45.5 89 39.0 90 31.0 91 23.0 92 18.5 93 9.0 94 4.0 95 5.0 96 6.0 97 4.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 53 1.7109872E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.62889814257564 #Duplication Level Percentage of deduplicated Percentage of total 1 67.93515248749398 32.35676458127195 2 17.74220490305675 16.900833403047923 3 6.401049749311357 9.1462483954653 4 2.76871017733499 5.274824600904031 5 1.4047464693026586 3.3453263251279544 6 0.8366578061675203 2.390945365808617 7 0.5540927340569195 1.847357847435679 8 0.38575106706523804 1.469831862531207 9 0.2685790739773704 1.1512912821925916 >10 1.5243069848867958 12.925726594492284 >50 0.09891784155685829 3.2910525649386417 >100 0.07849184093137264 6.471911717759657 >500 7.888251396765726E-4 0.2522228921911528 >1k 4.1255917637655865E-4 0.3757713561809259 >5k 6.249115552571527E-5 0.20775761748772367 >10k+ 7.498938663085832E-5 2.592133593164358 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 363973 2.127268982491511 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG 18978 0.11091842183272907 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0520242348978415E-4 0.0 0.0 1.7533737248297357E-5 5.844579082765786E-6 2 0.0019228665182299434 0.0 0.0 1.7533737248297357E-5 5.844579082765786E-6 3 0.0019462448345610066 0.0 0.0 2.3378316331063142E-5 5.844579082765786E-6 4 0.002092359311630151 0.0 0.0 2.9222895413828928E-5 5.844579082765786E-6 5 0.002098203890712917 0.0 0.0 2.9222895413828928E-5 5.844579082765786E-6 6 0.0021098930488784484 0.0 0.0 4.09120535793605E-5 5.844579082765786E-6 7 0.0021098930488784484 0.0 0.0 4.09120535793605E-5 5.844579082765786E-6 8 0.0021098930488784484 0.0 0.0 4.09120535793605E-5 1.1689158165531571E-5 9 0.0021098930488784484 0.0 0.0 4.6756632662126285E-5 1.1689158165531571E-5 10 0.0021098930488784484 0.0 0.0 4.6756632662126285E-5 1.7533737248297357E-5 11 0.0021098930488784484 0.0 0.0 6.429036991042364E-5 1.7533737248297357E-5 12 0.0021391159442922776 0.0 0.0 7.013494899318943E-5 1.7533737248297357E-5 13 0.0023086087376924854 0.0 0.0 8.1824107158721E-5 2.3378316331063142E-5 14 0.0023319870540235484 0.0 0.0 8.1824107158721E-5 2.3378316331063142E-5 15 0.0024138111611822694 0.0 0.0 8.1824107158721E-5 2.3378316331063142E-5 16 0.0024488786356788644 0.0 0.0 8.1824107158721E-5 3.5067474496594714E-5 17 0.00245472321476163 0.0 0.0 8.766868624148679E-5 5.2601211744892074E-5 18 0.0025190135846720535 0.0 0.0 9.935784440701835E-5 5.2601211744892074E-5 19 0.0025482364800858827 0.0 0.0 9.935784440701835E-5 5.2601211744892074E-5 20 0.0025540810591686484 0.0 0.0 1.0520242348978415E-4 5.2601211744892074E-5 21 0.0026066822709135407 0.0 0.0 1.0520242348978415E-4 5.2601211744892074E-5 22 0.002624216008161838 0.0 0.0 1.1104700257254993E-4 5.2601211744892074E-5 23 0.002647594324492901 0.0 0.0 1.227361607380815E-4 6.429036991042364E-5 24 0.0026826617989894955 0.0 0.0 1.285807398208473E-4 6.429036991042364E-5 25 0.002729418431651622 0.0 0.0 1.4026989798637885E-4 6.429036991042364E-5 26 0.0027761750643137484 0.0 0.0 1.4026989798637885E-4 7.013494899318943E-5 27 0.0029106003832173612 0.0 0.0 1.4026989798637885E-4 7.013494899318943E-5 28 0.0029339786995484242 0.0 0.0 4.149651148763708E-4 7.013494899318943E-5 29 0.0030450257021209745 0.0 0.0 4.208096939591366E-4 7.013494899318943E-5 30 0.0031210052301969297 0.0 0.0 6.54592857269768E-4 7.597952807595521E-5 31 0.0032612751281833083 0.0 0.0 6.604374363525338E-4 7.597952807595521E-5 32 0.003325565498093732 0.0 0.0 6.721265945180653E-4 8.1824107158721E-5 33 0.00338401128892139 0.0 0.0 6.721265945180653E-4 8.1824107158721E-5 34 0.0034775245542456425 0.0 0.0 6.779711736008312E-4 8.1824107158721E-5 35 0.0035885715568181923 0.0 0.0 6.779711736008312E-4 8.1824107158721E-5 36 0.0036996185593907425 0.0 0.0 6.838157526835969E-4 8.1824107158721E-5 37 0.0038574221946254188 0.0 0.0 6.838157526835969E-4 8.766868624148679E-5 38 0.00393924630178414 0.0 0.0 6.955049108491285E-4 8.766868624148679E-5 39 0.004026914988025626 0.0 0.0 6.955049108491285E-4 8.766868624148679E-5 40 0.004178874044177537 0.0 0.0 7.013494899318943E-4 9.351326532425257E-5 41 0.004360055995743276 0.0 0.0 7.071940690146601E-4 9.351326532425257E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGCAGT 139305 0.0 44.37511 1 TCAACGC 143325 0.0 43.025536 12 CAACGCA 143865 0.0 42.984913 13 AGTGGTA 143570 0.0 42.8359 5 GGTATCA 143875 0.0 42.727123 8 ACGCAGA 144605 0.0 42.699944 15 AACGCAG 144810 0.0 42.673573 14 GTATCAA 144100 0.0 42.668564 9 TGGTATC 143695 0.0 42.643272 7 ATCAACG 144655 0.0 42.642944 11 GTGGTAT 143835 0.0 42.640976 6 CGCAGAG 145405 0.0 42.41491 16 TATCAAC 145365 0.0 42.30372 10 AGCAGTG 146775 0.0 42.187122 2 GCAGTGG 146980 0.0 42.11549 3 CAGTGGT 146725 0.0 41.95645 4 AGAGTAC 143375 0.0 41.907444 19 GAGTACT 72115 0.0 41.763294 20 GCAGAGT 147320 0.0 41.47115 17 CAGAGTA 145480 0.0 41.45453 18 >>END_MODULE