SRR805393_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR805393_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17187137
Sequences flagged as poor quality	0
Sequence length	53
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	241361	1.4043118408842612	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG	39634	0.2306026885105995	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCAGTG	35838	0.20851640386644965	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	156695	44.55094	1
TCAACGC	162980	43.137165	12
CAACGCA	163340	43.059353	13
AGTGGTA	161880	42.98462	5
GGTATCA	162705	42.960205	8
GTATCAA	162830	42.93444	9
ATCAACG	163705	42.933205	11
AGCAGTG	163420	42.891598	2
GTGGTAT	162255	42.879482	6
ACGCAGA	164275	42.78852	15
AACGCAG	164435	42.785473	14
TGGTATC	163005	42.73697	7
GCAGTGG	164655	42.63697	3
TATCAAC	164145	42.609093	10
CGCAGAG	165495	42.504333	16
AGAGTAC	162870	42.18659	19
CAGTGGT	165480	42.103455	4
CAGAGTA	166030	41.80404	18
GAGTACT	55350	41.62918	20
GCAGAGT	167570	41.567104	17