SRR805389_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR805389_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18211796
Sequences flagged as poor quality	0
Sequence length	53
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	803122	4.409900045003798	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTG	32631	0.17917507971207233	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTA	30319	0.16648001108731944	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG	28755	0.15789217054704544	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCC	27295	0.14987538845701984	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCAGTG	27241	0.14957887733862163	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTC	23188	0.12732407061884504	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	314460	45.82896	1
AGCAGTG	325030	44.3827	2
GCAGTGG	327835	44.000805	3
AGTGGTA	329350	43.572216	5
GAGTACT	155950	43.449757	20
GTGGTAT	329665	43.42936	6
TGGTATC	330510	43.302685	7
TCAACGC	332485	43.299908	12
CAACGCA	333310	43.29214	13
GGTATCA	331645	43.275654	8
GTATCAA	332025	43.267883	9
ATCAACG	333310	43.215996	11
AACGCAG	333635	43.20912	14
CAGTGGT	332215	43.203526	4
ACGCAGA	333520	43.197243	15
CGCAGAG	333580	43.111977	16
GTACTTT	156665	42.975456	22
TATCAAC	334545	42.953903	10
AGTACTT	157260	42.93091	21
AGAGTAC	328425	42.86849	19