##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805380_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 17154972 Sequences flagged as poor quality 0 Sequence length 53 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.164084791278 35.0 28.0 37.0 26.0 37.0 2 35.03113808638102 35.0 33.0 37.0 33.0 37.0 3 37.60844465382981 39.0 37.0 39.0 35.0 39.0 4 38.09193719465121 39.0 39.0 39.0 37.0 39.0 5 38.141390612587415 39.0 39.0 39.0 37.0 39.0 6 38.121475919634264 39.0 39.0 39.0 37.0 39.0 7 38.14624168433502 39.0 39.0 39.0 37.0 39.0 8 39.11451251567184 40.0 40.0 40.0 37.0 40.0 9 39.15447655641758 40.0 40.0 40.0 37.0 40.0 10 39.11475250440514 40.0 40.0 40.0 38.0 40.0 11 39.17967881264977 40.0 40.0 40.0 38.0 40.0 12 39.189791041337756 40.0 40.0 40.0 38.0 40.0 13 39.205745774461185 40.0 40.0 40.0 38.0 40.0 14 39.17209267377411 40.0 40.0 40.0 38.0 40.0 15 39.14869852308707 40.0 40.0 40.0 38.0 40.0 16 39.09735643987061 40.0 40.0 40.0 37.0 40.0 17 39.055696389361636 40.0 40.0 40.0 37.0 40.0 18 39.0397063312024 40.0 40.0 40.0 37.0 40.0 19 39.009700336438904 40.0 40.0 40.0 37.0 40.0 20 38.98284141763682 40.0 40.0 40.0 37.0 40.0 21 38.95810748044357 40.0 40.0 40.0 37.0 40.0 22 38.92430381116332 40.0 40.0 40.0 37.0 40.0 23 38.885510742891334 40.0 40.0 40.0 37.0 40.0 24 38.8505349935867 40.0 40.0 40.0 37.0 40.0 25 38.850317097573814 40.0 40.0 40.0 37.0 40.0 26 38.84743402670666 40.0 40.0 40.0 37.0 40.0 27 38.85454910681288 40.0 40.0 40.0 37.0 40.0 28 38.83697222006541 40.0 40.0 40.0 37.0 40.0 29 38.80974880052267 40.0 40.0 40.0 37.0 40.0 30 38.70758914674999 40.0 39.0 40.0 36.0 40.0 31 38.729898305867245 40.0 39.0 40.0 36.0 40.0 32 38.71607904693753 40.0 39.0 40.0 36.0 40.0 33 38.62336749952142 40.0 39.0 40.0 36.0 40.0 34 38.62500562519134 40.0 39.0 40.0 36.0 40.0 35 38.588742202552126 40.0 39.0 40.0 36.0 40.0 36 38.52768561790716 40.0 39.0 40.0 35.0 40.0 37 38.50675920660203 40.0 39.0 40.0 35.0 40.0 38 38.34795661572633 40.0 39.0 40.0 35.0 40.0 39 38.36678416030058 40.0 38.0 40.0 35.0 40.0 40 38.3790822858819 40.0 38.0 40.0 35.0 40.0 41 38.34690461750681 40.0 38.0 40.0 35.0 40.0 42 38.32175878806447 40.0 38.0 40.0 35.0 40.0 43 38.21084831849332 40.0 38.0 40.0 35.0 40.0 44 38.01968700386104 40.0 38.0 40.0 34.0 40.0 45 37.959886731380266 40.0 38.0 40.0 34.0 40.0 46 37.89991659560855 40.0 38.0 40.0 34.0 40.0 47 38.021161969835916 40.0 38.0 40.0 34.0 40.0 48 38.02398156056448 40.0 38.0 40.0 34.0 40.0 49 37.97103113896076 40.0 38.0 40.0 34.0 40.0 50 37.91093007904647 40.0 38.0 40.0 34.0 40.0 51 37.90318276240847 40.0 38.0 40.0 34.0 40.0 52 37.852560645391904 40.0 38.0 40.0 34.0 40.0 53 37.4499589390178 40.0 37.0 40.0 33.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 6.0 11 21.0 12 48.0 13 83.0 14 198.0 15 504.0 16 1102.0 17 1888.0 18 3138.0 19 4584.0 20 6379.0 21 8940.0 22 12405.0 23 16679.0 24 23287.0 25 31339.0 26 43132.0 27 56012.0 28 73668.0 29 93908.0 30 118343.0 31 149641.0 32 185654.0 33 231322.0 34 298159.0 35 405513.0 36 595457.0 37 1017423.0 38 2660263.0 39 1.1115874E7 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 18.688004853636603 32.5526150669322 19.433112452762966 29.326267626668233 2 22.713648264771287 23.84761688914444 33.522345591703676 19.916389254380597 3 17.54505341075462 27.835953331780434 29.948227254465937 24.670766002999013 4 18.944595187914036 30.512944002473454 29.603604132959237 20.938856676653277 5 23.626619734500295 29.467200529385885 27.52639293144868 19.379786804665144 6 21.747432755938046 28.0321530108006 29.80573795165623 20.414676281605125 7 22.14425648727378 29.13096564657756 28.518029641785485 20.206748224363174 8 20.16366450496101 27.363664598228432 30.669744025230706 21.802926871579857 9 20.214996561929684 26.874389535581873 31.68498322235676 21.225630680131687 10 21.0405764579505 28.272485667711962 29.548768718479984 21.138169155857554 11 21.03384954519308 28.339579918871333 29.27202679199943 21.354543743936162 12 21.111646232940515 28.225088330077135 28.818432347193575 21.84483308978878 13 21.386750150335423 28.670148805838913 28.273616535194577 21.669484508631083 14 21.63146637604538 28.502879515046715 28.22925038875027 21.63640372015763 15 21.54493752598372 28.32127618745166 28.12113013066999 22.012656155894632 16 21.965457011529953 28.280244351316924 28.037591667302053 21.716706969851074 17 22.277401560317323 28.016402475037555 27.884248368344757 21.82194759630036 18 21.79913205337788 28.299982069338263 27.852450006913447 22.048435870370408 19 22.336737127871732 28.208498387522873 27.729471082785796 21.725293401819602 20 22.157593728512058 28.23934658710023 27.894041447575663 21.709018236812046 21 22.125416468181935 28.245956915581093 27.90695898541834 21.721667630818633 22 22.041213474437615 28.129349322167357 28.123042112805546 21.70639509058948 23 21.84830147201639 28.226434878471384 28.300121970470137 21.625141679042088 24 21.78903585502792 28.078850842776077 28.178326376749553 21.953786925446455 25 21.833262100340356 28.095580686462213 28.195347681127082 21.875809532070353 26 21.89194479594604 27.884545658249984 28.612975876614666 21.610533669189316 27 21.986343084675394 27.781071283590553 28.47973753614987 21.752848095584184 28 22.204717093096978 27.848730968491235 28.235202016068577 21.711349922343214 29 22.148978150474395 27.89503824314024 28.342611110061856 21.613372496323517 30 22.04859908835759 27.808882462763563 28.28189401883023 21.860624430048617 31 22.095908987785 27.98852717451244 28.095149324638946 21.820414513063618 32 22.059616302492362 27.944091077502197 28.269466134949102 21.726826485056343 33 22.116608526087948 27.9127765408186 28.052636868191914 21.917978064901533 34 22.054439960613166 28.092951711025815 27.981374729145582 21.871233599215433 35 22.05308758300509 27.96272707411006 28.173435666347924 21.810749676536926 36 22.045888503927607 27.969908665546058 28.143036316235314 21.841166514291015 37 22.05306426614978 28.1021968441569 27.935376402829455 21.909362486863866 38 22.00183713503001 28.04270388782914 28.229186267398166 21.72627270974269 39 22.03702226969534 28.02489563958484 28.128061065911385 21.810021024808435 40 22.09184602574694 28.06785111628279 28.006399544108845 21.833903313861427 41 22.041213474437615 27.926218707905793 28.20095538482954 21.831612432827054 42 22.06943852779241 27.91807529618818 28.168533297518643 21.843952878500765 43 22.007054281405996 28.05725943475746 27.981223169586055 21.95446311425049 44 21.94409294285062 27.93275325660689 28.251751154126048 21.871402646416442 45 22.025795203862764 27.920739246907544 28.143910698309504 21.909554850920188 46 22.183557046901623 27.941969243668836 27.96707566762569 21.90739804180386 47 22.059103331675505 27.919655013135554 28.1750795046474 21.846162150541545 48 22.035914719068035 27.89415803185222 28.084062159938238 21.985865089141505 49 22.07094829417384 28.068148406188016 27.937725576002105 21.92317772363604 50 22.113728894456955 27.99605851877811 28.079725224850264 21.810487361914667 51 22.085888569214802 27.911121044091473 28.080727849628666 21.922262537065055 52 22.102740826391322 28.050252719736296 27.875830983577238 21.971175470295144 53 22.267608481086416 27.91887972769644 28.00097254603505 21.812539245182098 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 519.0 1 557.5 2 596.0 3 693.0 4 790.0 5 892.0 6 994.0 7 1217.0 8 2013.0 9 2586.0 10 3814.5 11 5043.0 12 7696.5 13 10350.0 14 15294.5 15 20239.0 16 30583.0 17 40927.0 18 58882.0 19 76837.0 20 102110.0 21 127383.0 22 171219.5 23 215056.0 24 240535.0 25 305391.5 26 344769.0 27 394371.0 28 443973.0 29 497704.5 30 551436.0 31 602503.5 32 653571.0 33 707837.0 34 762103.0 35 821556.5 36 881010.0 37 934673.5 38 988337.0 39 1045716.0 40 1103095.0 41 1149397.0 42 1215030.5 43 1234362.0 44 1228197.0 45 1222032.0 46 1187030.0 47 1152028.0 48 1120069.0 49 1088110.0 50 1051537.0 51 1014964.0 52 963007.5 53 911051.0 54 845459.0 55 779867.0 56 707144.0 57 634421.0 58 555457.0 59 405835.0 60 335177.0 61 282157.5 62 229138.0 63 191649.5 64 154161.0 65 125512.0 66 96863.0 67 77657.0 68 58451.0 69 46324.5 70 34198.0 71 26429.0 72 18660.0 73 14270.0 74 9880.0 75 7647.0 76 4280.0 77 3146.0 78 2483.0 79 1820.0 80 1412.0 81 1004.0 82 742.0 83 480.0 84 357.5 85 235.0 86 169.0 87 103.0 88 77.0 89 51.0 90 47.0 91 43.0 92 35.0 93 21.0 94 15.0 95 11.0 96 7.0 97 4.0 98 1.0 99 2.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 53 1.7154972E7 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.209226258553 #Duplication Level Percentage of deduplicated Percentage of total 1 71.22327874713241 37.185122749850244 2 17.040629440552106 17.793561560998885 3 5.398023173696026 8.454798396732244 4 2.18359463120213 4.560151446295744 5 1.1163321101830468 2.9141417860117302 6 0.679058819800871 2.1271881339509786 7 0.46282981272226476 1.6914790488134304 8 0.3021049338713026 1.2618131877049623 9 0.232062576546444 1.0904226808550461 >10 1.164552606081934 11.313253233946034 >50 0.12155059617489584 4.433114475705696 >100 0.07514428077228613 6.765062959903785 >500 7.93599749883184E-4 0.24821772154255797 >1k 2.2335758501277136E-5 0.03024365076865307 >5k 1.1167877927798265E-5 0.05641749185561652 >10k+ 1.1167877927798265E-5 0.0750114750643351 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5738877335387083E-4 0.0 0.0 0.0 0.0 2 1.5738877335387083E-4 0.0 0.0 0.0 0.0 3 1.5738877335387083E-4 1.1658427655842284E-5 0.0 0.0 0.0 4 1.6321798718179197E-4 1.1658427655842284E-5 0.0 0.0 0.0 5 1.690472010097131E-4 1.1658427655842284E-5 0.0 0.0 0.0 6 1.7487641483763424E-4 2.3316855311684567E-5 0.0 5.829213827921142E-6 0.0 7 1.7487641483763424E-4 2.9146069139605708E-5 0.0 5.829213827921142E-6 0.0 8 1.8653484249347654E-4 2.9146069139605708E-5 0.0 1.7487641483763424E-5 0.0 9 1.8653484249347654E-4 2.9146069139605708E-5 0.0 1.7487641483763424E-5 0.0 10 1.981932701493188E-4 2.9146069139605708E-5 0.0 2.3316855311684567E-5 0.0 11 2.1568091163308222E-4 4.080449679544799E-5 0.0 3.497528296752685E-5 0.0 12 2.3316855311684566E-4 4.080449679544799E-5 0.0 4.080449679544799E-5 0.0 13 2.681438360843725E-4 4.080449679544799E-5 0.0 5.8292138279211415E-5 0.0 14 2.7397304991229365E-4 4.6633710623369135E-5 0.0 7.577977976297483E-5 0.0 15 2.9146069139605706E-4 4.6633710623369135E-5 0.0 7.577977976297483E-5 0.0 16 3.089483328798205E-4 4.6633710623369135E-5 0.0 7.577977976297483E-5 0.0 17 3.206067605356628E-4 4.6633710623369135E-5 0.0 8.160899359089598E-5 0.0 18 3.4392361584734734E-4 4.6633710623369135E-5 0.0 8.743820741881712E-5 0.0 19 3.8472811264279535E-4 4.6633710623369135E-5 0.0 9.326742124673827E-5 0.0 20 4.255326094382433E-4 4.6633710623369135E-5 0.0 9.90966350746594E-5 0.0 21 4.663371062336913E-4 4.6633710623369135E-5 0.0 9.90966350746594E-5 0.0 22 5.246292445129027E-4 4.6633710623369135E-5 0.0 9.90966350746594E-5 0.0 23 6.062382381037987E-4 4.6633710623369135E-5 0.0 9.90966350746594E-5 0.0 24 6.761888040388524E-4 4.6633710623369135E-5 0.0 1.0492584890258054E-4 0.0 25 7.752854391135118E-4 4.6633710623369135E-5 0.0 1.107550627305017E-4 0.0 26 8.918697156719347E-4 5.8292138279211415E-5 0.0 1.107550627305017E-4 0.0 27 0.0010142832060582787 5.8292138279211415E-5 0.0 1.2824270421426512E-4 0.0 28 0.001154184337928386 5.8292138279211415E-5 0.0 1.3407191804218625E-4 0.0 29 0.0013290607527660203 5.8292138279211415E-5 0.0 1.399011318701074E-4 0.0 30 0.0014689618846361276 5.8292138279211415E-5 0.0 1.399011318701074E-4 0.0 31 0.0016554967271296041 6.412135210713256E-5 0.0 1.399011318701074E-4 0.0 32 0.0018420315696230807 6.99505659350537E-5 0.0 1.4573034569802853E-4 0.0 33 0.001976103487665267 7.577977976297483E-5 0.0 1.5738877335387083E-4 0.0 34 0.002220930468437955 7.577977976297483E-5 0.0 1.5738877335387083E-4 0.0 35 0.0024249529524151946 7.577977976297483E-5 0.0 1.690472010097131E-4 0.0 36 0.002681438360843725 8.160899359089598E-5 0.0 1.690472010097131E-4 0.0 37 0.0029495821969280976 8.160899359089598E-5 0.0 1.7487641483763424E-4 0.0 38 0.0031885799638728643 8.160899359089598E-5 0.0 1.7487641483763424E-4 0.0 39 0.0035558204350318963 8.743820741881712E-5 0.0 1.9236405632139768E-4 0.0 40 0.003841451912600032 8.743820741881712E-5 0.0 1.9236405632139768E-4 0.0 41 0.004092108107200641 8.743820741881712E-5 0.0 1.981932701493188E-4 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATCGGA 1425 0.0 27.54035 1 CTCGTAT 1495 0.0 26.565218 12 GCTCGTA 1565 0.0 24.776358 11 TATGCCG 1680 0.0 22.800594 16 TCGTATG 1790 0.0 22.187151 13 ATGCCGT 1965 0.0 19.613232 17 CGTATGC 2085 0.0 18.935253 14 GCCGTCT 2145 0.0 18.624708 19 TGCCGTC 2200 0.0 17.945456 18 GAGCTCG 2355 0.0 17.163483 9 TCAACGC 15925 0.0 17.132496 11 CAACGCA 16100 0.0 16.873293 12 ATCAACG 16335 0.0 16.616161 10 AGTGGTA 16750 0.0 16.288656 4 AACGCAG 17065 0.0 15.960445 13 AAGCAGT 9595 0.0 15.821782 1 GGTATCA 17105 0.0 15.813213 7 CGCAGAG 17320 0.0 15.711894 15 ACGCAGA 17395 0.0 15.64415 14 GTGGTAT 17570 0.0 15.515083 5 >>END_MODULE