##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805375_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 30475548 Sequences flagged as poor quality 0 Sequence length 53 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 35.125942936284524 35.0 35.0 37.0 33.0 37.0 2 35.39984314638083 37.0 35.0 37.0 33.0 37.0 3 37.20873852703157 39.0 37.0 39.0 34.0 39.0 4 37.20855949825742 39.0 37.0 39.0 34.0 39.0 5 37.200714553188675 39.0 37.0 39.0 34.0 39.0 6 37.224180054120765 39.0 37.0 39.0 34.0 39.0 7 36.969421156922266 39.0 37.0 39.0 33.0 39.0 8 37.989667782183936 40.0 38.0 40.0 34.0 40.0 9 37.94538142513467 40.0 38.0 40.0 33.0 40.0 10 37.598375523879014 40.0 37.0 40.0 33.0 40.0 11 37.70774386075026 40.0 37.0 40.0 33.0 40.0 12 37.70635881592679 40.0 37.0 40.0 33.0 40.0 13 37.78234908195908 40.0 37.0 40.0 33.0 40.0 14 37.730135615608944 40.0 37.0 40.0 33.0 40.0 15 37.6421805442186 40.0 37.0 40.0 33.0 40.0 16 37.61604139161009 40.0 37.0 40.0 33.0 40.0 17 37.56787477619763 40.0 37.0 40.0 32.0 40.0 18 37.52663627246342 40.0 37.0 40.0 32.0 40.0 19 37.46342326641673 40.0 37.0 40.0 32.0 40.0 20 37.255831133865094 40.0 37.0 40.0 32.0 40.0 21 37.133494990803776 39.0 37.0 40.0 32.0 40.0 22 37.099347450618446 39.0 37.0 40.0 32.0 40.0 23 36.63791177766516 39.0 36.0 40.0 30.0 40.0 24 36.72568257017068 39.0 36.0 40.0 30.0 40.0 25 36.72296652385053 39.0 36.0 40.0 30.0 40.0 26 36.7425089452042 39.0 36.0 40.0 30.0 40.0 27 36.73449071366986 39.0 36.0 40.0 30.0 40.0 28 36.65506720338548 39.0 36.0 40.0 30.0 40.0 29 36.626524090723485 39.0 36.0 40.0 30.0 40.0 30 36.56504700095959 39.0 36.0 40.0 30.0 40.0 31 36.404220229280206 39.0 35.0 40.0 30.0 40.0 32 36.291728798445234 39.0 35.0 40.0 30.0 40.0 33 36.14224876284423 39.0 35.0 40.0 30.0 40.0 34 36.11662038037839 39.0 35.0 40.0 30.0 40.0 35 36.05500711586876 38.0 35.0 40.0 29.0 40.0 36 35.95011374364786 38.0 35.0 40.0 29.0 40.0 37 35.85363688948268 38.0 35.0 40.0 29.0 40.0 38 35.75697152353093 38.0 35.0 40.0 29.0 40.0 39 35.9116429670108 38.0 35.0 40.0 29.0 40.0 40 35.99703762504943 38.0 35.0 40.0 29.0 40.0 41 35.98895389838437 38.0 35.0 40.0 29.0 40.0 42 35.91112297636125 38.0 35.0 40.0 29.0 40.0 43 35.88308390713762 38.0 35.0 40.0 29.0 40.0 44 35.734375604993225 38.0 34.0 40.0 28.0 40.0 45 35.578543624547784 38.0 34.0 40.0 28.0 40.0 46 35.49355742511997 38.0 34.0 40.0 28.0 40.0 47 35.42659925262049 38.0 34.0 40.0 28.0 40.0 48 35.31034352524194 38.0 34.0 40.0 27.0 40.0 49 35.143843976160824 38.0 34.0 40.0 27.0 40.0 50 34.96952704509202 38.0 33.0 40.0 26.0 40.0 51 34.78356405600976 37.0 33.0 40.0 26.0 40.0 52 34.431906523879405 37.0 33.0 40.0 25.0 40.0 53 33.927701447731145 36.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 16.0 12 50.0 13 144.0 14 352.0 15 907.0 16 2216.0 17 5285.0 18 10790.0 19 20635.0 20 35613.0 21 56234.0 22 82386.0 23 114022.0 24 152736.0 25 200482.0 26 256067.0 27 322185.0 28 401921.0 29 497237.0 30 614901.0 31 761097.0 32 948887.0 33 1196824.0 34 1545162.0 35 2063682.0 36 2883340.0 37 4255659.0 38 6244756.0 39 7801958.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 18.783596606695966 37.71799608000486 24.607737980626304 18.890669332672868 2 27.32455212946458 39.9589434782272 16.051117440119533 16.665386952188683 3 35.10159029790047 24.595921950279614 19.057901764391573 21.244585987428348 4 22.35405578268847 24.520930681869938 19.613458632474796 33.5115549029668 5 20.88890739552903 34.72968558268419 21.667948349936154 22.713458671850624 6 32.16891456718022 23.089133622798187 22.44275312128924 22.299198688732357 7 21.618039485294897 22.881396587191805 32.783328457293045 22.717235470220256 8 31.569286301266843 23.92897742150527 22.91187019836362 21.589866078864276 9 32.17119180268719 23.82097280088286 22.503506745801584 21.504328650628366 10 21.24799199673128 24.20676734016399 33.50330566656258 21.041934996542146 11 21.120893379833564 34.568776253014384 23.18631645278372 21.124013914368334 12 20.97621673611907 23.609596782312167 33.9144680843803 21.49971839718846 13 21.166972944998395 23.777045781096373 23.343914931406648 31.712066342498584 14 21.33693215295095 34.23547297656469 23.19151406235583 21.236080808128534 15 21.213961435574515 34.00140335458447 23.146402486347416 21.6382327234936 16 21.532757999954587 23.443575157368787 23.097697865843134 31.92596897683349 17 31.887315036960125 23.43793785102732 23.15771975617961 21.517027355832948 18 21.36833765876827 23.428422025421824 23.11123330743716 32.09200700837275 19 21.617501348950313 33.915331071323145 23.028084679560152 21.43908290016639 20 32.150578555634176 23.551110549349268 23.090948192301582 21.207362702714978 21 21.68455182495816 33.72898167409492 23.066482676537923 21.519983824408996 22 32.047952017138456 23.331268727308856 23.27339281971238 21.347386435840303 23 21.686806091230913 23.444746588314015 33.52188121440835 21.346566106046723 24 21.639827444612315 33.57400825081144 23.092444473845063 21.69371983073118 25 21.52476798776514 23.4754794237006 23.061416319732793 31.938336268801464 26 21.64994703294589 30.273060225200872 26.642451187424093 21.434541554429146 27 21.825819178050548 23.2280220194892 33.40024599393586 21.545912808524395 28 28.636331658416776 23.278485427070912 26.59351687457761 21.491666039934703 29 28.709895552985625 23.413623275945685 26.43435320670854 21.44212796436015 30 28.623777331255862 23.305185521192268 26.48333017670429 21.587706970847577 31 26.53185760597316 24.230248460175353 26.996216770244786 22.241677163606706 32 24.896750010861165 25.112572216913048 27.331964629479344 22.65871314274644 33 24.53247436272516 24.52996415355681 27.8349580457093 23.102603438008728 34 23.781331183938022 24.557497702748446 28.04115614262293 23.6200149706906 35 23.437567061960625 24.80608388075581 28.438107167096717 23.318241890186847 36 23.7435139804541 24.686371513319465 28.4448404340424 23.125274072184034 37 24.316684969865022 24.531824661528645 28.176792752012204 22.97469761659413 38 24.167355415561353 24.75029161083502 28.14810089715204 22.934252076451585 39 24.290929895665865 24.6422246451483 28.077283466732084 22.98956199245375 40 23.728305066081173 25.295128409175778 27.81220209723546 23.164364427507586 41 24.071340735201872 25.386296581114802 27.738254288323215 22.80410839536011 42 24.023384255469335 25.360075559592893 27.79233699095419 22.824203193983582 43 23.80765064503516 25.090613628998565 28.367604743317493 22.73413098264878 44 24.212352145398665 24.779866140553075 27.956452169457297 23.051329544590963 45 24.32413028307153 24.426192434669264 27.919625924364016 23.330051357895186 46 23.812982788693414 24.61919962850217 27.69949206491709 23.868325517887325 47 23.666537513943968 24.722072265935957 28.030964365267526 23.580425854852553 48 23.61268122233602 24.531286525184058 27.986213734368288 23.869818518111636 49 23.31669638885575 25.431463939549175 27.652890770003545 23.598948901591534 50 24.10192262990644 25.172823799591725 27.545952578112786 23.179300992389045 51 23.905200982768218 24.764762228393728 27.875794062833588 23.454242726004466 52 24.3844212415803 24.670975563753604 27.590900088162485 23.353703106503616 53 24.73994233015925 24.88262065049659 26.988020034947365 23.389416984396803 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 9326.0 1 5646.5 2 1967.0 3 1818.0 4 1669.0 5 1892.0 6 2115.0 7 2424.5 8 3334.5 9 3935.0 10 5317.5 11 6700.0 12 9191.5 13 11683.0 14 15211.0 15 18739.0 16 26056.5 17 33374.0 18 44519.0 19 55664.0 20 78981.5 21 102299.0 22 492022.5 23 881746.0 24 623265.0 25 362310.0 26 359836.0 27 388425.0 28 417014.0 29 451676.0 30 486338.0 31 520577.0 32 554816.0 33 620269.0 34 685722.0 35 770157.0 36 854592.0 37 944860.0 38 1035128.0 39 1129687.5 40 1224247.0 41 1321670.0 42 1518896.0 43 1618699.0 44 1737976.5 45 1857254.0 46 1947748.5 47 2038243.0 48 2139322.0 49 2240401.0 50 2268047.0 51 2295693.0 52 2290264.5 53 2284836.0 54 2237065.0 55 2189294.0 56 2134723.5 57 2080153.0 58 1865679.5 59 1454153.5 60 1257101.0 61 1082033.0 62 906965.0 63 770791.5 64 634618.0 65 517806.0 66 400994.0 67 317066.5 68 233139.0 69 182477.0 70 131815.0 71 98423.5 72 65032.0 73 47563.0 74 30094.0 75 22486.0 76 10613.5 77 6349.0 78 4582.5 79 2816.0 80 2114.5 81 1413.0 82 1003.5 83 594.0 84 422.0 85 250.0 86 171.0 87 92.0 88 71.5 89 51.0 90 41.0 91 31.0 92 20.5 93 6.0 94 2.0 95 3.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 53 3.0475548E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.198979993107955 #Duplication Level Percentage of deduplicated Percentage of total 1 73.03210535538898 30.818803527466116 2 13.609090998012519 11.485795174990317 3 4.775497686732797 6.045633940187118 4 2.2834262492943025 3.8543303443883126 5 1.333605417824715 2.8138394172742762 6 0.8790478397615341 2.225695332184905 7 0.6181178481923546 1.8258759896476482 8 0.47199791290067655 1.5934264386627488 9 0.37191770294655946 1.4125092935152077 >10 2.3259428554690755 18.69825981256911 >50 0.19558160332265426 5.674058197154687 >100 0.09715865244664713 7.36188308359962 >500 0.005007928454289418 1.416432239462678 >1k 0.001250463505429975 0.9073308848047416 >5k 1.4602398253513987E-4 0.41556611319643266 >10k+ 1.0546176507522844E-4 3.450560210896056 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 655253 2.1500942329240478 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG 97953 0.32141505708117213 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCAGTG 55593 0.1824183768574071 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCC 44610 0.14637964836596212 No Hit AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTG 33868 0.11113171779552579 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.018813640365056E-4 0.0 0.0 0.0 9.84395752292953E-6 2 3.5438247082546307E-4 0.0 0.0 0.0 2.2969234220168905E-5 3 6.037627280730112E-4 0.0 0.0 0.0 5.2501106788957496E-5 4 6.136066855959407E-4 0.0 0.0 3.2813191743098435E-6 6.562638348619687E-5 5 6.136066855959407E-4 3.2813191743098435E-6 0.0 6.562638348619687E-6 7.875166018343624E-5 6 6.595451540362785E-4 3.2813191743098435E-6 0.0 6.562638348619687E-6 1.0172089440360514E-4 7 6.595451540362785E-4 3.2813191743098435E-6 0.0 6.562638348619687E-6 1.2469012862377404E-4 8 6.595451540362785E-4 3.2813191743098435E-6 0.0 6.562638348619687E-6 1.5422200119256265E-4 9 6.661077923848982E-4 3.2813191743098435E-6 0.0 6.562638348619687E-6 1.903165121099709E-4 10 6.726704307335179E-4 3.2813191743098435E-6 0.0 6.562638348619687E-6 2.0016046963290045E-4 11 6.792330690821376E-4 3.2813191743098435E-6 0.0 6.562638348619687E-6 2.1328574633013982E-4 12 6.857957074307573E-4 3.2813191743098435E-6 0.0 6.562638348619687E-6 2.2969234220168903E-4 13 6.923583457793769E-4 3.2813191743098435E-6 0.0 6.562638348619687E-6 2.493802572475481E-4 14 6.956396649536868E-4 3.2813191743098435E-6 0.0 6.562638348619687E-6 2.789121298163367E-4 15 7.022023033023065E-4 3.2813191743098435E-6 0.0 6.562638348619687E-6 2.953187256878859E-4 16 7.022023033023065E-4 6.562638348619687E-6 0.0 9.84395752292953E-6 3.182879599080548E-4 17 7.218902183481656E-4 6.562638348619687E-6 0.0 9.84395752292953E-6 3.412571941282237E-4 18 7.317341758710951E-4 6.562638348619687E-6 0.0 9.84395752292953E-6 3.707890666970123E-4 19 7.54703410091264E-4 6.562638348619687E-6 0.0 9.84395752292953E-6 4.2000885431165997E-4 20 7.645473676141935E-4 6.562638348619687E-6 0.0 9.84395752292953E-6 4.3969676935751904E-4 21 7.842352826600526E-4 6.562638348619687E-6 0.0 9.84395752292953E-6 4.5610336522906825E-4 22 8.17048474403151E-4 6.562638348619687E-6 0.0 9.84395752292953E-6 4.856352377978568E-4 23 8.400177086233199E-4 6.562638348619687E-6 0.0 9.84395752292953E-6 5.184484295409552E-4 24 8.826748578893478E-4 6.562638348619687E-6 0.0 9.84395752292953E-6 5.414176637611242E-4 25 9.384572838526152E-4 6.562638348619687E-6 0.0 9.84395752292953E-6 5.709495363299127E-4 26 9.811144331186431E-4 6.562638348619687E-6 0.0 9.84395752292953E-6 5.873561322014619E-4 27 0.0010368968590819105 6.562638348619687E-6 0.0 9.84395752292953E-6 6.037627280730112E-4 28 0.0010795540083479386 6.562638348619687E-6 0.0 9.84395752292953E-6 6.234506431188702E-4 29 0.0011583056685313747 6.562638348619687E-6 0.0 9.84395752292953E-6 6.431385581647293E-4 30 0.0012436199670634307 6.562638348619687E-6 0.0 9.84395752292953E-6 6.628264732105884E-4 31 0.0013059650313753178 6.562638348619687E-6 0.0 9.84395752292953E-6 6.661077923848982E-4 32 0.0014536243942192607 6.562638348619687E-6 0.0 9.84395752292953E-6 7.022023033023065E-4 33 0.0015750332036687249 6.562638348619687E-6 0.0 9.84395752292953E-6 7.284528566967852E-4 34 0.0016898793747695694 6.562638348619687E-6 0.0 9.84395752292953E-6 7.415781333940246E-4 35 0.001781756311650245 6.562638348619687E-6 0.0 1.6406595871549218E-5 7.579847292655738E-4 36 0.0018966024827510896 6.562638348619687E-6 0.0 1.6406595871549218E-5 8.072045168802215E-4 37 0.0020311365688977932 6.562638348619687E-6 0.0 1.6406595871549218E-5 8.367363894490101E-4 38 0.0021689519742188064 9.84395752292953E-6 0.0 1.968791504585906E-5 8.498616661462494E-4 39 0.0023756750822003267 9.84395752292953E-6 0.0 1.968791504585906E-5 8.59705623669179E-4 40 0.0025528663176130582 9.84395752292953E-6 0.0 1.968791504585906E-5 8.958001345865873E-4 41 0.0027497454680716488 9.84395752292953E-6 0.0 1.968791504585906E-5 9.089254112838266E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGCAGT 331120 0.0 45.176746 1 GTGGTAT 330630 0.0 45.043976 6 AGTGGTA 330245 0.0 44.992596 5 GGTATCA 330875 0.0 44.990738 8 GTATCAA 330715 0.0 44.98621 9 TCAACGC 332555 0.0 44.962727 12 TGGTATC 330850 0.0 44.952225 7 ATCAACG 333555 0.0 44.739864 11 ACGCAGA 334710 0.0 44.63111 15 CAACGCA 335130 0.0 44.62286 13 TATCAAC 334520 0.0 44.473816 10 AACGCAG 337335 0.0 44.31934 14 CGCAGAG 337300 0.0 44.273777 16 CAGTGGT 337810 0.0 44.15685 4 AGAGTAC 330120 0.0 44.119095 19 GCAGTGG 341045 0.0 44.000526 3 AGCAGTG 340515 0.0 43.97723 2 GCAGAGT 336670 0.0 43.669083 17 CAGAGTA 335215 0.0 43.66444 18 GAGTACA 223900 0.0 43.154354 20 >>END_MODULE