##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805361_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 17940374 Sequences flagged as poor quality 0 Sequence length 53 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 35.66931809782784 37.0 35.0 37.0 35.0 37.0 2 35.689277826649544 37.0 35.0 37.0 35.0 37.0 3 37.295821592125115 39.0 37.0 39.0 34.0 39.0 4 37.319293510826476 39.0 37.0 39.0 34.0 39.0 5 37.29359627619803 39.0 37.0 39.0 34.0 39.0 6 37.224960527578745 39.0 37.0 39.0 34.0 39.0 7 37.122261219303454 39.0 37.0 39.0 33.0 39.0 8 38.03355359258397 40.0 38.0 40.0 34.0 40.0 9 37.59154117968778 40.0 37.0 40.0 33.0 40.0 10 37.74034426484086 40.0 37.0 40.0 33.0 40.0 11 37.87873842540852 40.0 37.0 40.0 33.0 40.0 12 37.812477933849095 40.0 37.0 40.0 33.0 40.0 13 37.93463948967842 40.0 38.0 40.0 34.0 40.0 14 37.81293282960545 40.0 37.0 40.0 33.0 40.0 15 37.79492032886271 40.0 37.0 40.0 33.0 40.0 16 37.702278057302486 40.0 37.0 40.0 33.0 40.0 17 37.58497136124364 40.0 37.0 40.0 33.0 40.0 18 37.49153668702782 40.0 37.0 40.0 32.0 40.0 19 37.4895851112134 40.0 37.0 40.0 32.0 40.0 20 37.29476698757785 40.0 37.0 40.0 32.0 40.0 21 37.20797342351949 39.0 37.0 40.0 32.0 40.0 22 37.131800318098165 39.0 37.0 40.0 32.0 40.0 23 36.944339956346504 39.0 36.0 40.0 31.0 40.0 24 36.928318997140195 39.0 36.0 40.0 31.0 40.0 25 36.83655452221899 39.0 36.0 40.0 31.0 40.0 26 36.61589975771965 39.0 36.0 40.0 30.0 40.0 27 36.5337449486839 39.0 36.0 40.0 30.0 40.0 28 36.43910701081259 39.0 36.0 40.0 30.0 40.0 29 36.38422727419172 39.0 35.0 40.0 30.0 40.0 30 36.16876337137676 38.0 35.0 40.0 30.0 40.0 31 36.10659772198729 38.0 35.0 40.0 30.0 40.0 32 35.943655466714354 38.0 35.0 40.0 29.0 40.0 33 35.80593219517051 38.0 35.0 40.0 28.0 40.0 34 35.69900666507844 38.0 34.0 40.0 28.0 40.0 35 35.64812060216805 38.0 34.0 40.0 28.0 40.0 36 35.484104289018724 38.0 34.0 40.0 27.0 40.0 37 35.32519985369313 38.0 34.0 40.0 27.0 40.0 38 35.2994190087676 38.0 34.0 40.0 27.0 40.0 39 35.251003741616536 38.0 34.0 40.0 27.0 40.0 40 35.16516099385665 38.0 33.0 40.0 27.0 40.0 41 34.98261178947551 38.0 33.0 40.0 26.0 40.0 42 34.847849604473126 37.0 33.0 40.0 26.0 40.0 43 34.6682513419174 37.0 33.0 40.0 26.0 40.0 44 34.55285909870106 37.0 33.0 40.0 26.0 40.0 45 34.2762898365441 37.0 33.0 39.0 25.0 40.0 46 34.34728088723234 37.0 33.0 39.0 25.0 40.0 47 34.38951623862468 37.0 33.0 39.0 26.0 40.0 48 34.38621218264458 37.0 33.0 39.0 26.0 40.0 49 34.262404897467576 36.0 33.0 39.0 26.0 40.0 50 34.04409122128669 36.0 32.0 39.0 25.0 40.0 51 33.77453374160427 36.0 32.0 39.0 24.0 40.0 52 33.52888741338391 35.0 32.0 39.0 23.0 40.0 53 33.37338669751255 35.0 31.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 10.0 12 45.0 13 135.0 14 330.0 15 885.0 16 1937.0 17 4159.0 18 8090.0 19 14597.0 20 23853.0 21 36696.0 22 52109.0 23 72311.0 24 96725.0 25 125522.0 26 160403.0 27 203108.0 28 253683.0 29 316247.0 30 394078.0 31 490124.0 32 615987.0 33 784113.0 34 1019103.0 35 1374274.0 36 1922988.0 37 2810125.0 38 3877755.0 39 3280980.0 >>END_MODULE >>Per base sequence content pass #Base G A T C 1 24.542699054099987 28.880055677769036 21.856578909670446 24.72066635846053 2 25.31749338113018 25.867554377628917 26.147147211089354 22.667805030151545 3 24.665723245234464 24.510169074513165 25.33220321939777 25.49190446085461 4 23.531861710352302 25.644025035375517 25.139314264017017 25.684798990255164 5 25.221107430647766 28.28844593763764 23.957884044111903 22.53256258760269 6 26.72511732475588 24.437885185671156 25.2400702460272 23.59692724354576 7 24.075178142885985 25.187590849555306 27.731339380104338 23.005891627454368 8 26.330889199968745 24.479606723917797 25.3476265322005 23.841877543912965 9 26.414059149491532 24.48513615156518 25.657731550078054 23.443073148865235 10 23.300121836924916 25.16426357666791 28.301996379785617 23.233618206621557 11 23.228467812320968 27.72909305012259 25.44178844878039 23.600650688776053 12 23.204198530086384 24.77868633061942 28.224824075573903 23.7922910637203 13 23.472375770984485 25.018285571973024 24.988826877299214 26.520511779743277 14 23.488417799985665 27.753590867169216 25.1055524260531 23.65243890679202 15 23.5366386453259 27.672717413806424 25.004528891092235 23.78611504977544 16 23.814693049319928 24.84165603236588 24.846499855577147 26.49715106273704 17 26.606747440159275 24.759790403477652 25.074995649477543 23.55846650688553 18 23.514504212676947 24.794338178234188 24.95556112709802 26.735596481990843 19 24.003970039866505 27.62566711262541 24.704758105934694 23.665604741573393 20 26.78385634546972 24.639491908028226 24.917858457131384 23.658793289370667 21 23.885611303309506 27.555300686596613 24.73529258643103 23.82379542366285 22 27.041599021291308 24.541528509940765 24.732070802983262 23.684801665784672 23 23.75273781917813 24.631727298438705 27.96475703349328 23.650777848889884 24 23.83405162010558 27.525992490457558 24.607909511808394 24.032046377628472 25 23.94830230406568 24.535480698451437 24.669379802227088 26.846837195255794 26 23.85272458645511 26.05012582234908 26.209793619687083 23.887355971508732 27 24.1012924256763 24.519299318955113 27.55649352683506 23.822914728533533 28 25.725801479946853 24.449874902273496 26.01404519214594 23.81027842563371 29 25.66955404608622 24.60338340772606 25.98338808321387 23.74367446297385 30 25.500254342523743 24.46560478616555 26.006525839427873 24.027615031882835 31 25.156075341573146 24.80585967717284 25.938717888489947 24.099347092764063 32 24.68369388508846 25.12937578670322 26.156305325630335 24.030625002577985 33 24.53060900514114 24.843172165753067 26.295299083508517 24.330919745597278 34 24.398616216139086 24.91013843970031 26.355531941530312 24.33571340263029 35 24.35307647432545 25.312225932413675 26.26543348538888 24.069264107871998 36 24.167639983425097 25.047978375478685 26.393178871298893 24.391202769797328 37 24.334933039857475 25.0010507027334 26.341334913084868 24.32268134432426 38 24.35334960129594 25.155233664582465 26.254826125698383 24.236590608423214 39 24.71922826135063 24.886794444753495 26.031999109940518 24.36197818395536 40 24.608734466739655 24.878483581223 26.117459981603503 24.39532197043384 41 24.44101221078223 25.214836658366206 26.188305773335607 24.155845357515958 42 24.672590437635247 24.993425443639023 26.119249241961178 24.214734876764552 43 24.6076308108181 25.099354116029023 25.989218507930772 24.303796565222108 44 24.61166082713772 25.003263588596315 26.095280956796106 24.289794627469863 45 24.542944310971443 24.96248405969686 26.155502666778297 24.3390689625534 46 24.361588002568954 25.30618926896396 26.01779093345546 24.314431795011632 47 24.377964472758485 25.20729500956892 26.19744159179736 24.217298925875237 48 24.675076450468648 24.949775294539567 26.238143084419534 24.13700517057225 49 24.47890439742226 25.2239111626101 25.97919084630008 24.317993593667556 50 24.52615536331628 25.2180807378932 26.063336249288895 24.19242764950162 51 24.434691272322418 25.126148429235645 26.0566529995417 24.382507298900236 52 24.60720718531286 25.201302938277653 25.826406963422276 24.36508291298721 53 24.515224710477053 25.311891491225325 25.815348108127512 24.357535690170113 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 18708.0 1 11300.5 2 3893.0 3 3410.0 4 2927.0 5 2976.5 6 3026.0 7 3359.0 8 4229.0 9 4766.0 10 5922.5 11 7079.0 12 9220.0 13 11361.0 14 14036.0 15 16711.0 16 22054.5 17 27398.0 18 35021.0 19 42644.0 20 55546.5 21 68449.0 22 176021.5 23 283594.0 24 221789.5 25 169446.0 26 178907.0 27 197356.0 28 215805.0 29 236015.0 30 256225.0 31 275632.5 32 295040.0 33 335850.5 34 376661.0 35 416400.0 36 456139.0 37 500339.0 38 544539.0 39 597905.5 40 651272.0 41 695542.0 42 805171.5 43 870531.0 44 963113.5 45 1055696.0 46 1106304.5 47 1156913.0 48 1286609.5 49 1416306.0 50 1470343.0 51 1524380.0 52 1492619.0 53 1460858.0 54 1374571.0 55 1288284.0 56 1196668.0 57 1105052.0 58 1041565.5 59 929860.5 60 881642.0 61 759287.5 62 636933.0 63 544570.5 64 452208.0 65 376458.5 66 300709.0 67 246997.5 68 193286.0 69 155047.5 70 116809.0 71 94558.0 72 72307.0 73 50634.5 74 28962.0 75 20988.5 76 10360.0 77 7705.0 78 6169.0 79 4633.0 80 4238.5 81 3844.0 82 3051.5 83 2259.0 84 1496.5 85 734.0 86 509.0 87 284.0 88 212.5 89 141.0 90 121.5 91 102.0 92 76.0 93 32.0 94 14.0 95 9.0 96 4.0 97 2.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 53 1.7940374E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.54565788184242 #Duplication Level Percentage of deduplicated Percentage of total 1 61.72436101155968 20.705842974691144 2 18.039646269910303 12.103036041597317 3 8.029593773361025 8.080740169540233 4 3.9505828889940515 5.3009960811222046 5 2.0981083826175615 3.519121300115723 6 1.296981635729021 2.6104861338718863 7 0.8502233977429816 1.9964912256676588 8 0.6069845671779351 1.628935730408737 9 0.4554052430890629 1.3749181634036691 >10 2.735113588889728 16.772677041892187 >50 0.11042903368171025 2.4557626944549367 >100 0.05699138602747243 4.179158569557394 >500 0.02227561806066136 5.560806516814933 >1k 0.02314878039135308 12.330776785254423 >5k 8.57904262529946E-5 0.19953030548262884 >10k+ 6.863234100239569E-5 1.1807202661248646 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 161572 0.9006055280675865 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.678853071847889E-4 0.0 0.0 0.0 0.0 2 3.678853071847889E-4 0.0 0.0 0.0 5.574019805830135E-6 3 3.678853071847889E-4 0.0 0.0 0.0 5.574019805830135E-6 4 3.678853071847889E-4 0.0 0.0 0.0 1.6722059417490405E-5 5 3.678853071847889E-4 5.574019805830135E-6 0.0 0.0 2.7870099029150673E-5 6 3.7903334679644917E-4 1.114803961166027E-5 0.0 0.0 3.901813864081095E-5 7 3.7903334679644917E-4 1.114803961166027E-5 0.0 0.0 3.901813864081095E-5 8 3.7903334679644917E-4 1.114803961166027E-5 0.0 0.0 4.459215844664108E-5 9 3.7903334679644917E-4 1.114803961166027E-5 0.0 0.0 4.459215844664108E-5 10 3.7903334679644917E-4 1.114803961166027E-5 0.0 0.0 4.459215844664108E-5 11 3.846073666022793E-4 1.114803961166027E-5 0.0 0.0 5.0166178252471215E-5 12 3.901813864081094E-4 1.114803961166027E-5 0.0 0.0 6.131421786413148E-5 13 4.0690344582559987E-4 1.6722059417490405E-5 0.0 0.0 7.246225747579176E-5 14 4.0690344582559987E-4 1.6722059417490405E-5 0.0 0.0 7.80362772816219E-5 15 4.0690344582559987E-4 1.6722059417490405E-5 0.0 0.0 7.80362772816219E-5 16 4.180514854372601E-4 3.344411883498081E-5 0.0 0.0 9.475833669911229E-5 17 4.2919952504892037E-4 3.344411883498081E-5 0.0 0.0 1.0033235650494243E-4 18 4.4034756466058067E-4 3.344411883498081E-5 0.0 0.0 1.0033235650494243E-4 19 4.514956042722409E-4 3.344411883498081E-5 0.0 0.0 1.1705441592243283E-4 20 4.7379168349556146E-4 3.344411883498081E-5 0.0 0.0 1.3935049514575336E-4 21 5.239578617480327E-4 3.344411883498081E-5 0.0 0.0 1.3935049514575336E-4 22 5.574019805830135E-4 5.0166178252471215E-5 0.0 0.0 1.560725545632438E-4 23 5.741240400005039E-4 5.0166178252471215E-5 0.0 0.0 1.6722059417490404E-4 24 5.908460994179943E-4 5.0166178252471215E-5 0.0 0.0 1.6722059417490404E-4 25 6.465862974762957E-4 5.0166178252471215E-5 0.0 0.0 1.783686337865643E-4 26 7.524926737870682E-4 5.5740198058301345E-5 0.0 0.0 1.8394265359239446E-4 27 8.249549312628599E-4 5.5740198058301345E-5 0.0 0.0 1.950906932040547E-4 28 8.862691491269914E-4 5.5740198058301345E-5 0.0 0.0 1.950906932040547E-4 29 9.197132679619722E-4 5.5740198058301345E-5 0.0 0.0 2.0066471300988486E-4 30 0.001031193664078575 5.5740198058301345E-5 0.0 0.0 2.0066471300988486E-4 31 0.0011259520007776873 6.131421786413148E-5 0.0 0.0 2.0623873281571498E-4 32 0.0012653024959234406 6.131421786413148E-5 0.0 5.574019805830135E-6 2.396828516506958E-4 33 0.0014269490702925145 6.688823766996162E-5 0.0 1.114803961166027E-5 2.396828516506958E-4 34 0.001566299565438268 6.688823766996162E-5 0.0 1.114803961166027E-5 2.508308912623561E-4 35 0.0017056500605840213 7.246225747579176E-5 0.0 1.114803961166027E-5 2.7312697048567663E-4 36 0.0019397588924288868 7.246225747579176E-5 0.0 1.114803961166027E-5 2.7312697048567663E-4 37 0.0022909221401961853 7.246225747579176E-5 0.0 1.114803961166027E-5 2.842750100973369E-4 38 0.0024971608730119006 7.246225747579176E-5 0.0 1.114803961166027E-5 2.954230497089971E-4 39 0.002759139803885917 7.246225747579176E-5 0.0 1.114803961166027E-5 2.954230497089971E-4 40 0.0029375084376724813 7.80362772816219E-5 0.0 1.114803961166027E-5 3.065710893206574E-4 41 0.0032719496260222893 7.80362772816219E-5 0.0 1.114803961166027E-5 3.28867168543978E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGAGTAC 61970 0.0 40.405434 19 AAGCAGT 63880 0.0 39.97354 1 GGTATCA 64665 0.0 39.390163 8 TCAACGC 65375 0.0 39.3434 12 TGGTATC 64570 0.0 39.331654 7 GTATCAA 64935 0.0 39.22276 9 ATCAACG 65680 0.0 39.139233 11 ACGCAGA 65500 0.0 39.085342 15 GAGTACT 29585 0.0 38.762886 20 CGCAGAG 66395 0.0 38.530155 16 GTACATG 35350 0.0 37.799435 22 CAGAGTA 66990 0.0 37.654724 18 GAGTACA 36200 0.0 37.418232 20 GCAGAGT 67880 0.0 37.206024 17 AGTACTT 30880 0.0 37.205795 21 GTACTTT 30795 0.0 37.163498 22 ACATGGG 36255 0.0 36.693832 24 TACATGG 36470 0.0 36.535507 23 GTGGTAT 69635 0.0 36.534927 6 AGTGGTA 69835 0.0 36.393284 5 >>END_MODULE