##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805358_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 25231873 Sequences flagged as poor quality 0 Sequence length 53 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 35.69534235528214 37.0 35.0 37.0 35.0 37.0 2 35.60508405380766 37.0 35.0 37.0 33.0 37.0 3 37.30633358054711 39.0 37.0 39.0 34.0 39.0 4 37.247983770368535 39.0 37.0 39.0 34.0 39.0 5 37.223395861258496 39.0 37.0 39.0 34.0 39.0 6 37.227331478721375 39.0 37.0 39.0 34.0 39.0 7 36.92619069539546 39.0 37.0 39.0 33.0 39.0 8 37.91496239696514 40.0 38.0 40.0 33.0 40.0 9 37.89332773670825 40.0 38.0 40.0 33.0 40.0 10 37.376855455795926 39.0 37.0 40.0 32.0 40.0 11 37.63006662248181 40.0 37.0 40.0 33.0 40.0 12 37.70096988043654 40.0 37.0 40.0 33.0 40.0 13 37.79500820252226 40.0 37.0 40.0 33.0 40.0 14 37.7296600216718 40.0 37.0 40.0 33.0 40.0 15 37.69896602602589 40.0 37.0 40.0 33.0 40.0 16 37.5314651829454 40.0 37.0 40.0 32.0 40.0 17 37.40900570480836 40.0 37.0 40.0 32.0 40.0 18 37.363756824552816 40.0 37.0 40.0 32.0 40.0 19 37.328231756715006 39.0 37.0 40.0 32.0 40.0 20 37.18539016108713 39.0 37.0 40.0 32.0 40.0 21 36.89589884983965 39.0 36.0 40.0 31.0 40.0 22 36.951902936416964 39.0 36.0 40.0 31.0 40.0 23 36.27978117201208 39.0 36.0 40.0 30.0 40.0 24 36.551953753096335 39.0 36.0 40.0 30.0 40.0 25 36.65231582292761 39.0 36.0 40.0 30.0 40.0 26 36.58882255788146 39.0 36.0 40.0 30.0 40.0 27 36.52141198554701 39.0 36.0 40.0 30.0 40.0 28 36.46314746432023 39.0 36.0 40.0 30.0 40.0 29 36.35272752046588 39.0 35.0 40.0 30.0 40.0 30 36.24335553686403 39.0 35.0 40.0 30.0 40.0 31 36.00093120316514 38.0 35.0 40.0 29.0 40.0 32 35.88485139410776 38.0 35.0 40.0 29.0 40.0 33 35.68536374608417 38.0 35.0 40.0 28.0 40.0 34 35.682693115964874 38.0 35.0 40.0 28.0 40.0 35 35.69415477004026 38.0 35.0 40.0 28.0 40.0 36 35.65648007977846 38.0 35.0 40.0 28.0 40.0 37 35.5688738604542 38.0 34.0 40.0 28.0 40.0 38 35.441399177936574 38.0 34.0 40.0 27.0 40.0 39 35.36412786319906 38.0 34.0 40.0 27.0 40.0 40 35.31522495377176 38.0 34.0 40.0 27.0 40.0 41 35.25315786109101 38.0 34.0 40.0 27.0 40.0 42 35.03192481984988 38.0 33.0 40.0 26.0 40.0 43 35.01640940408982 38.0 33.0 40.0 26.0 40.0 44 34.917816049565566 38.0 33.0 40.0 26.0 40.0 45 34.78981104573568 37.0 33.0 40.0 26.0 40.0 46 34.62739139500266 37.0 33.0 40.0 26.0 40.0 47 34.773906954905804 37.0 33.0 40.0 26.0 40.0 48 34.81179887042076 37.0 33.0 40.0 26.0 40.0 49 34.69284519623256 37.0 33.0 40.0 26.0 40.0 50 34.549365122438594 37.0 33.0 40.0 25.0 40.0 51 34.30584550738663 37.0 33.0 40.0 24.0 40.0 52 34.019336654080334 37.0 33.0 40.0 23.0 40.0 53 33.48615717113034 36.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 17.0 12 36.0 13 92.0 14 292.0 15 783.0 16 2001.0 17 5015.0 18 10624.0 19 20476.0 20 34982.0 21 54818.0 22 79655.0 23 110364.0 24 148427.0 25 193844.0 26 248982.0 27 309120.0 28 380871.0 29 462351.0 30 561358.0 31 680286.0 32 835525.0 33 1046938.0 34 1350087.0 35 1816941.0 36 2563299.0 37 3749911.0 38 5213672.0 39 5351105.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 14.878384177028792 37.870965821681175 27.367999989537044 19.882650011752993 2 23.991306551043596 40.23964847952429 17.43098104528348 18.338063924148635 3 37.96859234350141 22.35587504740532 19.184655851747507 20.49087675734576 4 21.035501407287523 21.604000622545936 19.921473923081333 37.439024047085205 5 21.12159093381613 37.40086596028761 21.19664283345117 20.280900272445095 6 36.86195234099347 21.84069727998393 20.319831191287303 20.97751918773529 7 21.405133102881425 21.429463440942335 36.96407317839623 20.201330277780013 8 36.069997657328095 22.38487012042269 21.337758001556207 20.207374220693012 9 35.978129725050536 22.03329098874269 21.62490275692177 20.363676529285005 10 20.469170084995277 22.284612006409514 37.03109951449105 20.215118394104156 11 20.25492915250485 37.55449704427412 21.88902900708164 20.30154479613939 12 20.147580799887507 22.179625745579806 37.294171542477244 20.37862191205544 13 20.2052182174506 22.143155999556594 22.007854906371794 35.64377087662101 14 20.364528626154705 37.56629561348854 21.75017288649162 20.31900287386513 15 20.20101321847966 37.5379505120369 21.749550657614677 20.511485611868764 16 20.34452218430237 22.01486588015087 21.875708553225518 35.764903382321236 17 35.907183743355084 21.81687820004484 21.78182729439071 20.49411076220937 18 20.503277739230853 21.855761559991997 21.798330230974134 35.84263046980302 19 20.482494502092653 37.35834434486889 21.769854342561093 20.38930681047737 20 36.047736131201994 22.00760918541402 21.74705381562439 20.1976008677596 21 20.679186202308486 37.222817346932594 21.71802307343573 20.3799733773232 22 35.90228121392336 21.840970743630486 21.97159917537632 20.285148867069836 23 20.910373954402832 21.860382699294657 36.90101404679708 20.32822929950543 24 20.582946814927293 37.086251979787626 21.78763344282844 20.543167762456633 25 20.41355788371319 22.093892910764097 21.76954520974325 35.723003995779465 26 20.644262120374496 32.83912771754994 26.030469478028838 20.48614068404672 27 20.839102986924516 21.904854229410557 36.88390473430173 20.3721380493632 28 31.807939902043735 21.756815278834036 26.060086779923154 20.37515803919907 29 31.97462986596358 21.840709169707694 25.803348011461537 20.38131295286719 30 31.787580731719757 21.84683237744578 25.79871498243511 20.56687190839935 31 27.802212701371793 23.308495568283814 26.902977040190397 21.986314690153996 32 25.529555415882125 25.03728518291131 27.36193226717652 22.071227134030043 33 25.041220681476954 24.36101354822133 27.885694415154987 22.712071355146723 34 23.84681866463104 23.954210612902184 28.576487365801185 23.622483356665594 35 23.326611544057787 24.46549251417047 28.8738017982256 23.334094143546142 36 23.777303413028434 24.453701871438557 28.806042262498703 22.9629524530343 37 24.552937469208093 23.92396711888967 28.816457660515333 22.706637751386907 38 24.41595992497267 24.14209202780943 28.724534242860212 22.717413804357687 39 24.7818503208224 24.190816115791325 28.343532008107363 22.68380155527891 40 23.741642168221123 24.88890143034566 28.119069876421776 23.25038652501144 41 24.24340040075503 25.258509346492037 27.864982516359365 22.63310773639357 42 24.199459944967224 25.374767065449323 28.023310041232374 22.40246294835108 43 23.87972942000778 24.639399540414615 29.088098216093588 22.392772823484012 44 24.261040787578473 24.216870463797914 28.35502144450394 23.167067304119673 45 24.457078552987326 23.874168992527824 28.252068326437758 23.416684128047095 46 23.915580900395305 24.03230231857936 27.96939410720718 24.08272267381815 47 23.62898307232285 24.15506371643516 28.36143793209486 23.854515279147133 48 23.706024519067608 24.13101080526206 28.320402532146545 23.84256214352379 49 23.07265100771552 25.422734174351625 27.872817844319364 23.631796973613493 50 24.166236093531385 24.86652497022318 27.912240205077126 23.054998731168315 51 23.885912076364686 24.527033724369176 28.1850182108954 23.40203598837074 52 24.401513910600293 24.31606246591365 27.788844688620618 23.49357893486544 53 25.024151001394152 24.496346347336164 26.997464674937135 23.482037976332553 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 18929.0 1 10785.5 2 2642.0 3 2170.0 4 1698.0 5 1805.5 6 1913.0 7 2189.0 8 2973.5 9 3482.0 10 4484.0 11 5486.0 12 7294.0 13 9102.0 14 11771.5 15 14441.0 16 20367.0 17 26293.0 18 35443.0 19 44593.0 20 63011.5 21 81430.0 22 479349.5 23 877269.0 24 599518.5 25 314892.0 26 308016.0 27 327087.5 28 346159.0 29 368072.0 30 389985.0 31 412908.0 32 435831.0 33 480150.0 34 524469.0 35 588578.5 36 652688.0 37 724435.5 38 796183.0 39 867670.0 40 939157.0 41 1017792.5 42 1176978.0 43 1257528.0 44 1359441.5 45 1461355.0 46 1548332.0 47 1635309.0 48 1753675.0 49 1872041.0 50 1889438.0 51 1906835.0 52 1898084.0 53 1889333.0 54 1858974.5 55 1828616.0 56 1804607.5 57 1780599.0 58 1585326.5 59 1219598.0 60 1049142.0 61 921513.0 62 793884.0 63 685620.0 64 577356.0 65 474933.5 66 372511.0 67 303930.0 68 235349.0 69 188550.0 70 141751.0 71 106704.5 72 71658.0 73 52031.5 74 32405.0 75 24572.0 76 12679.0 77 8619.0 78 6558.0 79 4497.0 80 3751.0 81 3005.0 82 2376.5 83 1748.0 84 1194.0 85 640.0 86 458.0 87 276.0 88 192.5 89 109.0 90 81.0 91 53.0 92 35.0 93 12.5 94 8.0 95 8.5 96 9.0 97 4.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 53 2.5231873E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.731829507546905 #Duplication Level Percentage of deduplicated Percentage of total 1 75.48608409898307 31.501723918111097 2 11.89116288068936 9.924799639667976 3 4.0858748797618345 5.115331016141688 4 2.011543699873544 3.357815949204115 5 1.2691502710668603 2.6481981365809584 6 0.8435475725775713 2.112167008818736 7 0.6292545617423523 1.83819608612346 8 0.5197605522788651 1.7352447001960019 9 0.4132716214938256 1.5521922763639011 >10 2.567498436990732 19.093905225157616 >50 0.1708260693292556 4.94122067987395 >100 0.10351219956287326 7.813933387914609 >500 0.00584886822393483 1.7152438030043171 >1k 0.0023584803306575986 1.6030039457728025 >5k 1.624600193684189E-4 0.47353788839689553 >10k+ 1.4334707591267227E-4 4.573486338672044 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 680062 2.6952497739664434 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG 110281 0.4370702087791897 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCC 96601 0.38285306841866235 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCAGTG 61238 0.2427009679384483 No Hit AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTG 37909 0.15024251271397887 No Hit AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTA 28373 0.1124490441117867 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0608854523007468E-4 0.0 0.0 0.0 7.926482508849026E-6 2 2.655371640464424E-4 0.0 0.0 0.0 2.7742688780971592E-5 3 2.734636465552914E-4 3.963241254424513E-6 0.0 0.0 4.7558895053094156E-5 4 2.734636465552914E-4 3.963241254424513E-6 0.0 0.0 5.152213630751867E-5 5 2.7742688780971593E-4 3.963241254424513E-6 0.0 0.0 7.530158383406574E-5 6 3.051695765906875E-4 7.926482508849026E-6 0.0 0.0 8.719130759733928E-5 7 3.09132817845112E-4 1.1889723763273539E-5 0.0 3.963241254424513E-6 9.11545488517638E-5 8 3.1309605909953653E-4 1.9816206272122567E-5 0.0 7.926482508849026E-6 9.908103136061282E-5 9 3.1309605909953653E-4 1.9816206272122567E-5 0.0 1.1889723763273539E-5 1.0700751386946185E-4 10 3.249857828628101E-4 1.9816206272122567E-5 0.0 1.1889723763273539E-5 1.1493399637831088E-4 11 3.4876523038935713E-4 2.3779447526547078E-5 0.0 1.5852965017698052E-5 1.4267668515928247E-4 12 3.8839764293360226E-4 2.3779447526547078E-5 0.0 1.5852965017698052E-5 1.6645613268582955E-4 13 5.310743280928848E-4 2.3779447526547078E-5 0.0 1.9816206272122567E-5 1.9023558021237662E-4 14 6.341186007079221E-4 2.3779447526547078E-5 0.0 1.9816206272122567E-5 2.2986799275662176E-4 15 7.609423208495065E-4 2.3779447526547078E-5 0.0 2.3779447526547078E-5 2.417577165198953E-4 16 8.560601109556948E-4 2.3779447526547078E-5 0.0 2.3779447526547078E-5 2.5364744028316883E-4 17 9.947735548605527E-4 2.3779447526547078E-5 0.0 2.7742688780971592E-5 2.9327985282741396E-4 18 0.0012127518238539009 2.3779447526547078E-5 0.0 2.7742688780971592E-5 3.1309605909953653E-4 19 0.0014148771278295511 2.7742688780971592E-5 0.0 2.7742688780971592E-5 3.2894902411723456E-4 20 0.001652671603095022 2.7742688780971592E-5 0.0 2.7742688780971592E-5 3.606549541526307E-4 21 0.0019459514559224359 2.7742688780971592E-5 0.0 3.1705930035396104E-5 3.606549541526307E-4 22 0.002215451861223303 2.7742688780971592E-5 0.0 3.963241254424513E-5 3.844344016791778E-4 23 0.0025087317140507167 2.7742688780971592E-5 0.0 3.963241254424513E-5 4.002873666968758E-4 24 0.00280993804938698 2.7742688780971592E-5 0.0 3.963241254424513E-5 4.1217709046014936E-4 25 0.003107181143468818 2.7742688780971592E-5 0.0 4.7558895053094156E-5 4.280300554778474E-4 26 0.003440093408840477 2.7742688780971592E-5 0.0 4.7558895053094156E-5 4.518095030043945E-4 27 0.003848307258046202 2.7742688780971592E-5 0.0 4.7558895053094156E-5 4.676624680220925E-4 28 0.004220851935962107 3.1705930035396104E-5 0.0 5.152213630751867E-5 5.033316393119132E-4 29 0.004656808473948803 3.1705930035396104E-5 0.0 5.152213630751867E-5 5.112581218207621E-4 30 0.00500557370433816 3.1705930035396104E-5 0.0 5.152213630751867E-5 5.310743280928848E-4 31 0.005433603759816007 3.1705930035396104E-5 0.0 5.5485377561943185E-5 5.469272931105828E-4 32 0.005810111678986336 3.1705930035396104E-5 0.0 5.944861881636769E-5 5.508905343650073E-4 33 0.006178693115647816 3.566917128982062E-5 0.0 5.944861881636769E-5 5.588170168738563E-4 34 0.006535384828546022 3.566917128982062E-5 0.0 5.944861881636769E-5 5.746699818915544E-4 35 0.007018900261585813 3.963241254424513E-5 0.0 6.737510132521672E-5 5.94486188163677E-4 36 0.00744693031706366 3.963241254424513E-5 0.0 7.133834257964124E-5 6.222288769446486E-4 37 0.007819474994979564 3.963241254424513E-5 0.0 7.133834257964124E-5 6.499715657256202E-4 38 0.008223725602930864 4.359565379866964E-5 0.0 7.133834257964124E-5 6.578980482344691E-4 39 0.008675535105935259 4.359565379866964E-5 0.0 7.133834257964124E-5 6.856407370154407E-4 40 0.009131307850194078 4.7558895053094156E-5 0.0 7.133834257964124E-5 7.054569432875633E-4 41 0.009587080594452896 4.7558895053094156E-5 0.0 7.133834257964124E-5 7.173466670508369E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGCAGT 398125 0.0 45.614643 1 TCAACGC 403490 0.0 45.44844 12 GTATCAA 400705 0.0 45.44821 9 TGGTATC 400565 0.0 45.404255 7 GGTATCA 401325 0.0 45.394394 8 GTGGTAT 401100 0.0 45.350723 6 ACGCAGA 403930 0.0 45.3489 15 ATCAACG 404315 0.0 45.28828 11 CAACGCA 405050 0.0 45.287907 13 AGTGGTA 400980 0.0 45.275215 5 AACGCAG 405695 0.0 45.183464 14 CGCAGAG 405325 0.0 45.13832 16 AGAGTAC 393615 0.0 45.125328 19 TATCAAC 403750 0.0 45.09963 10 AGCAGTG 405640 0.0 44.83562 2 CAGAGTA 397985 0.0 44.815834 18 CAGTGGT 406875 0.0 44.707615 4 GCAGAGT 400395 0.0 44.706318 17 GCAGTGG 410200 0.0 44.630524 3 GTACATG 282585 0.0 44.582516 22 >>END_MODULE