SRR805356_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR805356_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13280566
Sequences flagged as poor quality	0
Sequence length	53
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	664427	5.003002131083871	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTG	32833	0.24722590889575038	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCC	31605	0.23797931503822956	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG	30319	0.2282959928063307	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCGTGGAGAAAGAAATG	26626	0.200488443037744	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTA	26537	0.1998182908770605	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCAGTG	19068	0.1435782179765531	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTC	17128	0.12897040683356417	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCCTTCGATTCTGTTTT	15782	0.11883529662817083	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	14350	0.10805262366076869	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTGG	13761	0.10361757172096431	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	247805	45.986237	1
TGGTATC	285020	45.884445	7
GTATCAA	286160	45.77803	9
GGTATCA	286160	45.77146	8
TCAACGC	287460	45.763115	12
ACGCAGA	285985	45.667988	15
CGCAGAG	285385	45.608368	16
ATCAACG	288215	45.597576	11
AGTGGTA	248720	45.515663	5
GTGGTAT	249520	45.473328	6
AGAGTAC	279720	45.471813	19
TATCAAC	288880	45.338047	10
CAACGCA	289770	45.327744	13
CAGAGTA	281520	45.31964	18
GCAGAGT	283725	45.27721	17
GAGTACT	117285	45.266827	20
CAGTGGT	250730	45.237007	4
AACGCAG	291690	45.23643	14
GCAGTGG	252455	45.13363	3
GTACATG	162795	45.106083	22