Basic Statistics
Measure | Value |
---|---|
Filename | SRR805352_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 10658162 |
Sequences flagged as poor quality | 0 |
Sequence length | 53 |
%GC | 47 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 83756 | 0.785839059304972 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAGCAGT | 57270 | 0.0 | 43.229 | 1 |
TCAACGC | 53095 | 0.0 | 43.15378 | 12 |
ACGCAGA | 57840 | 0.0 | 42.798927 | 15 |
GTATCAA | 53395 | 0.0 | 42.72647 | 9 |
GGTATCA | 53325 | 0.0 | 42.720863 | 8 |
GTGGTAT | 57810 | 0.0 | 42.565044 | 6 |
CAACGCA | 53955 | 0.0 | 42.479008 | 13 |
AGTGGTA | 57935 | 0.0 | 42.416416 | 5 |
ATCAACG | 54045 | 0.0 | 42.40827 | 11 |
TGGTATC | 53635 | 0.0 | 42.36879 | 7 |
AACGCAG | 58535 | 0.0 | 42.363033 | 14 |
CGCAGAG | 58410 | 0.0 | 42.304825 | 16 |
AGAGTAC | 57680 | 0.0 | 42.11096 | 19 |
TATCAAC | 54830 | 0.0 | 41.59967 | 10 |
CAGAGTA | 59020 | 0.0 | 41.282276 | 18 |
CAGTGGT | 60025 | 0.0 | 41.06872 | 4 |
GCAGAGT | 59775 | 0.0 | 40.870934 | 17 |
GCAGTGG | 60705 | 0.0 | 40.7674 | 3 |
AGCAGTG | 60920 | 0.0 | 40.58495 | 2 |
GAGTACA | 40645 | 0.0 | 40.252678 | 20 |