SRR805335_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR805335_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18302746
Sequences flagged as poor quality	0
Sequence length	53
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	381541	2.0846106917508442	No Hit
AAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGT	159315	0.8704431564531354	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG	55505	0.30326050528155724	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCAGTG	40115	0.21917476208214876	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCC	29566	0.16153860191252176	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTG	24966	0.13640576119015146	No Hit
AAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCACGCAGAGTAAGCAGTG	24234	0.13240636131867864	No Hit
AACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAG	23123	0.12633623391812354	No Hit
AGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAA	21219	0.11593342332347288	No Hit
AGTGGTATCAACGCAGAGTAAGCAGTGGTATCAACGCAGAGTAAGCAGTGGTA	20474	0.11186299585865421	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGAGTAC	213240	44.095013	19
GTACATG	142080	43.559685	22
GAGTACA	144830	43.313473	20
ACATGGG	140290	43.30808	24
GAGTACT	72045	43.089043	20
TACATGG	142725	43.05987	23
AGTACAT	144585	43.011414	21
GTACTTT	71445	42.799637	22
CATGGGG	87350	42.673958	25
AGTACTT	73140	42.28972	21
ATGGGGG	47825	41.398327	26
ACTTTTT	75005	40.918602	24
TACTTTT	74625	40.91598	23
TGGGGGG	33755	38.80581	27
CATGGGT	23940	38.25376	25
CTTTTTT	81360	37.601154	25
ATGGGGC	16120	35.935177	26
ATGGGGA	24300	35.665844	26
CATGGGA	21930	34.719563	25
CATGGGC	20010	34.492504	25