SRR805323_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR805323_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18135613
Sequences flagged as poor quality	0
Sequence length	53
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	453422	2.5001746563515663	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	28127	0.1550926345858836	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG	24269	0.1338195736752874	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTG	21022	0.1159155745107706	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCAACGC	135685	44.476543	12
CAACGCA	135775	44.45226	13
AACGCAG	136580	44.148956	14
ATCAACG	137380	44.12793	11
ACGCAGA	136490	44.09887	15
GGTATCA	137010	44.032696	8
GTATCAA	137005	44.00343	9
GTGGTAT	136810	43.933884	6
TGGTATC	137225	43.857533	7
AGTGGTA	136920	43.84195	5
CGCAGAG	137695	43.71295	16
AAGCAGT	139245	43.69047	1
AGAGTAC	135430	43.441074	19
TATCAAC	138960	43.386047	10
CAGTGGT	140660	42.861687	4
GAGTACT	73010	42.73839	20
CAGAGTA	137595	42.661907	18
GCAGTGG	142425	42.634125	3
GCAGAGT	138530	42.499493	17
AGCAGTG	143215	42.46294	2