SRR805320_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR805320_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18764221
Sequences flagged as poor quality	0
Sequence length	53
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	427931	2.2805689615358933	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCC	44124	0.23514964996415255	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGTGG	31223	0.1663964627148657	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTG	24633	0.13127643295183958	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCAGTG	21564	0.11492083790741967	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CAACGCA	231320	45.758556	13
TCAACGC	231275	45.751205	12
AACGCAG	231865	45.620598	14
ACGCAGA	231815	45.60003	15
GTATCAA	231715	45.597397	9
ATCAACG	232935	45.57447	11
GGTATCA	232545	45.522568	8
GTGGTAT	232140	45.483543	6
AGTGGTA	231935	45.465996	5
TGGTATC	232950	45.3839	7
TATCAAC	232810	45.38293	10
AGAGTAC	228305	45.347935	19
CGCAGAG	233275	45.338806	16
AAGCAGT	235500	45.261696	1
CAGAGTA	230320	44.906307	18
GAGTACA	160000	44.63678	20
GCAGAGT	232790	44.60447	17
CAGTGGT	237390	44.585556	4
ACATGGG	158530	44.53334	24
GTACATG	158615	44.52429	22