##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805309_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 22048481 Sequences flagged as poor quality 0 Sequence length 53 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 35.665387697229576 37.0 35.0 37.0 35.0 37.0 2 35.6076683015034 37.0 35.0 37.0 33.0 37.0 3 37.28047986616402 39.0 37.0 39.0 34.0 39.0 4 37.27283752563272 39.0 37.0 39.0 34.0 39.0 5 37.274577055897865 39.0 37.0 39.0 34.0 39.0 6 37.22372062728493 39.0 37.0 39.0 34.0 39.0 7 37.07437968175676 39.0 37.0 39.0 33.0 39.0 8 37.987844060550024 40.0 38.0 40.0 33.0 40.0 9 37.92023631922761 40.0 38.0 40.0 33.0 40.0 10 37.7172865105764 40.0 37.0 40.0 33.0 40.0 11 37.8045435873791 40.0 37.0 40.0 33.0 40.0 12 37.71527453523896 40.0 37.0 40.0 33.0 40.0 13 37.814956232132275 40.0 37.0 40.0 33.0 40.0 14 37.69984979917664 40.0 37.0 40.0 33.0 40.0 15 37.669569980807296 40.0 37.0 40.0 33.0 40.0 16 37.54591007879409 40.0 37.0 40.0 32.0 40.0 17 37.41701144854378 40.0 37.0 40.0 32.0 40.0 18 37.3934758135946 39.0 37.0 40.0 32.0 40.0 19 37.363454924627234 39.0 37.0 40.0 32.0 40.0 20 37.17548614800267 39.0 37.0 40.0 32.0 40.0 21 37.078780846626124 39.0 36.0 40.0 32.0 40.0 22 36.950394950110166 39.0 36.0 40.0 31.0 40.0 23 36.73087157342041 39.0 36.0 40.0 30.0 40.0 24 36.77828926174098 39.0 36.0 40.0 31.0 40.0 25 36.745346266711074 39.0 36.0 40.0 30.0 40.0 26 36.644275675952464 39.0 36.0 40.0 30.0 40.0 27 36.502094316610744 39.0 36.0 40.0 30.0 40.0 28 36.400420691112465 39.0 36.0 40.0 30.0 40.0 29 36.290123977248136 38.0 35.0 40.0 30.0 40.0 30 36.18295686673381 38.0 35.0 40.0 30.0 40.0 31 36.03905883584452 38.0 35.0 40.0 29.0 40.0 32 35.94929092847711 38.0 35.0 40.0 29.0 40.0 33 35.843212419032405 38.0 35.0 40.0 29.0 40.0 34 35.86258862912143 38.0 35.0 40.0 29.0 40.0 35 35.884231888809026 38.0 35.0 40.0 29.0 40.0 36 35.86167128701519 38.0 35.0 40.0 29.0 40.0 37 35.830788161778585 38.0 35.0 40.0 29.0 40.0 38 35.774735955733185 38.0 35.0 40.0 29.0 40.0 39 35.72086190427359 38.0 34.0 40.0 28.0 40.0 40 35.67089651209986 38.0 34.0 40.0 28.0 40.0 41 35.619791177451184 38.0 34.0 40.0 28.0 40.0 42 35.377027288183704 38.0 34.0 40.0 27.0 40.0 43 35.39392704649359 38.0 34.0 40.0 27.0 40.0 44 35.28318005217684 38.0 34.0 40.0 27.0 40.0 45 35.1456249072215 38.0 34.0 40.0 27.0 40.0 46 34.996109255780475 38.0 33.0 40.0 26.0 40.0 47 35.177850528569294 38.0 34.0 40.0 27.0 40.0 48 35.2428071121997 38.0 34.0 40.0 27.0 40.0 49 35.14780473992744 38.0 34.0 40.0 26.0 40.0 50 35.04303670624747 38.0 34.0 40.0 26.0 40.0 51 34.87811128576159 38.0 33.0 40.0 26.0 40.0 52 34.66113661072615 37.0 33.0 40.0 26.0 40.0 53 34.17162338757033 37.0 32.0 40.0 25.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 4.0 11 11.0 12 44.0 13 126.0 14 291.0 15 707.0 16 1676.0 17 3788.0 18 7941.0 19 14701.0 20 25100.0 21 38889.0 22 57099.0 23 80192.0 24 108725.0 25 144235.0 26 187416.0 27 238361.0 28 301709.0 29 376977.0 30 466873.0 31 580464.0 32 718982.0 33 903934.0 34 1162393.0 35 1542294.0 36 2136201.0 37 3143827.0 38 4752529.0 39 5052992.0 >>END_MODULE >>Per base sequence content pass #Base G A T C 1 18.845475114589526 32.181414220780105 26.294391890307544 22.67871877432282 2 26.561117747748696 31.769807634367194 22.43926010141016 19.229814516473947 3 28.218497228902073 25.25510487547872 23.22735067327314 23.299047222346065 4 22.619948285779866 26.445844500580336 23.121320693248666 27.81288652039113 5 23.415726462063304 30.259590218482625 23.882502381910122 22.442180937543952 6 27.621930054954806 24.701819594737614 24.545382514106073 23.130867836201503 7 23.289232487262954 24.934162131169035 28.979941974233963 22.796663407334048 8 26.699517304616133 25.15589622704621 25.216385654866656 22.928200813471005 9 26.95583428173578 24.88944249719516 25.331450270882605 22.823272950186453 10 22.50658446720207 25.432817798196623 29.523507764548494 22.53708997005281 11 22.374130898178425 29.832876015359062 25.235362018816627 22.557631067645882 12 22.313333059089196 25.120646633207976 29.67609877523989 22.88992153246294 13 22.4811949630453 25.320982429583243 25.114677968065013 27.083144639306443 14 22.650911870073955 29.730850846368963 24.98161211196363 22.63662517159345 15 22.56219827569981 29.582387104127488 24.937377772192107 22.918036847980595 16 22.793484049989658 25.09818703610466 24.906636425429944 27.201692488475736 17 27.313165020302304 25.00914235316256 24.904577326664818 22.773115299870316 18 22.793484049989658 24.933694978806024 24.85680532822193 27.416015642982387 19 22.905242315785838 29.47774043935272 24.848646035978625 22.768371208882826 20 27.418972762794862 25.07423527271561 24.86681508807795 22.639976876411577 21 22.998210171485283 29.284670449633243 24.853730286453747 22.863389092427727 22 27.322834620670694 24.9474102093473 24.984215465908967 22.745539704073035 23 22.975165500063248 24.957451717422167 29.39331738998256 22.674065392532032 24 22.96186299636696 29.178209600924436 24.866107556343678 22.99381984636493 25 22.858926199950012 25.01221739493074 24.875999394243983 27.252857010875264 26 23.03505171172563 27.927969278246422 26.29978908751129 22.737189922516656 27 23.074315187517907 24.79081438762153 29.26872830831294 22.86614211654762 28 26.08678121635681 24.891474383201274 26.206848444570852 22.814895955871066 29 26.200299240569 24.905117046385193 26.148522431091735 22.746061281954074 30 26.131482708491347 24.7605039095437 26.121191750125554 22.986821631839398 31 25.10874558660073 25.340562009691283 26.328131176020698 23.222561227687294 32 24.444795085883694 25.803886444603595 26.45145486439633 23.299863605116382 33 24.274488569076482 25.461432014296133 26.60863122498099 23.6554481916464 34 23.934678311852867 25.476435315430574 26.82958975722636 23.7592966154902 35 23.889786330405254 25.58457428427836 26.903803486507755 23.62183589880863 36 23.936864403493374 25.502378145687228 26.865433496302987 23.69532395451641 37 24.123725348698624 25.521599424468288 26.794154209534888 23.560521017298196 38 24.15154132386716 25.556563284336914 26.863950400936915 23.427944990859007 39 24.182500372701412 25.442414831207643 26.772778587332162 23.60230620875878 40 23.96359640376133 25.703367048278746 26.6555142732962 23.67752227466373 41 24.060637102392676 25.82331635453708 26.63810264298933 23.477943900080916 42 24.242772098449773 25.62854556737945 26.681615844647077 23.4470664895237 43 24.02686606846068 25.657268634515003 26.826977332361352 23.488887964662965 44 24.133272491651468 25.52305530707535 26.72622209212508 23.61745010914811 45 24.155899900768674 25.290191192762894 26.703676321284895 23.850232585183534 46 24.057103979181154 25.480861924229607 26.566623795988487 23.89541030060075 47 23.99665537049922 25.50152547923823 26.720539160951724 23.78127998931083 48 23.967868806925974 25.387894068530166 26.688482530837387 23.955754593706477 49 23.8625372877161 25.78727759068754 26.53644484624587 23.813740275350487 50 24.124940851934426 25.68321600023149 26.57706895998867 23.614774187845413 51 24.0485773146912 25.47252574905274 26.647731424219202 23.83116551203686 52 24.178377639711325 25.583549270355633 26.458203628630926 23.77986946130212 53 24.346879043504178 25.62578800779972 26.243163871470333 23.784169077225773 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 4545.0 1 3010.5 2 1476.0 3 1390.5 4 1305.0 5 1412.0 6 1519.0 7 1783.0 8 2480.0 9 2913.0 10 3897.5 11 4882.0 12 7102.0 13 9322.0 14 11512.0 15 13702.0 16 19371.5 17 25041.0 18 34791.0 19 44541.0 20 60448.5 21 76356.0 22 203683.5 23 331011.0 24 271731.5 25 232408.5 26 252365.0 27 285154.5 28 317944.0 29 351029.0 30 384114.0 31 417697.0 32 451280.0 33 502640.0 34 554000.0 35 619997.5 36 685995.0 37 759203.0 38 832411.0 39 903642.0 40 974873.0 41 1048248.0 42 1194018.5 43 1266414.0 44 1336099.0 45 1405784.0 46 1462133.0 47 1518482.0 48 1561734.5 49 1604987.0 50 1625504.0 51 1646021.0 52 1633478.0 53 1620935.0 54 1573678.0 55 1526421.0 56 1448445.5 57 1370470.0 58 1249543.5 59 998442.5 60 868268.0 61 760495.5 62 652723.0 63 557724.0 64 462725.0 65 379101.0 66 295477.0 67 237559.5 68 179642.0 69 139816.0 70 99990.0 71 74566.0 72 49142.0 73 36458.5 74 23775.0 75 17919.0 76 8922.5 77 5782.0 78 4184.0 79 2586.0 80 1998.0 81 1410.0 82 1058.5 83 707.0 84 455.0 85 203.0 86 144.5 87 86.0 88 54.0 89 22.0 90 18.5 91 15.0 92 12.0 93 5.5 94 2.0 95 2.0 96 2.0 97 2.5 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 53 2.2048481E7 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.121237300919724 #Duplication Level Percentage of deduplicated Percentage of total 1 77.82557470125504 42.12016396487078 2 11.889173486137903 12.869135591101447 3 3.9600292670430295 6.42965051040669 4 1.8875785316572458 4.086323425437736 5 1.0132420493822114 2.741895669894244 6 0.6500176736284327 2.1107856458541714 7 0.4541900187140756 1.720692804777356 8 0.3248246721722697 1.4063930531063091 9 0.2594530929783004 1.2637730172182564 >10 1.5983559644348542 16.383855213140336 >50 0.10328791806147777 3.742209951288126 >100 0.032059218239298866 2.999831106289821 >500 0.0019211313118312633 0.6686780816117329 >1k 2.3392762041262108E-4 0.234283054294795 >5k 1.6670675321247136E-5 0.06326489876094855 >10k+ 4.1676688303112875E-5 1.1590640119472033 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 190713 0.8649711515274 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0013606379505236665 0.0 0.0 4.5354598350788885E-6 2.7212759010473328E-5 2 0.006272540951914102 0.0 0.0 4.5354598350788885E-6 2.7212759010473328E-5 3 0.006304289170759655 0.0 0.0 4.5354598350788885E-6 3.1748218845552216E-5 4 0.00709799464189846 0.0 0.0 4.5354598350788885E-6 3.1748218845552216E-5 5 0.007111601021403697 1.3606379505236664E-5 0.0 9.070919670157777E-6 4.5354598350788885E-5 6 0.007143349240249249 1.3606379505236664E-5 0.0 9.070919670157777E-6 4.5354598350788885E-5 7 0.007143349240249249 1.3606379505236664E-5 0.0 9.070919670157777E-6 6.803189752618332E-5 8 0.007143349240249249 1.3606379505236664E-5 0.0 9.070919670157777E-6 6.803189752618332E-5 9 0.0071478847000843275 1.8141839340315554E-5 0.0 9.070919670157777E-6 9.070919670157777E-5 10 0.0071705619992597225 1.8141839340315554E-5 0.0 9.070919670157777E-6 1.0431557620681443E-4 11 0.0071705619992597225 2.2677299175394443E-5 0.0 9.070919670157777E-6 1.3152833521728777E-4 12 0.007274877575466536 2.2677299175394443E-5 0.0 9.070919670157777E-6 1.4513471472252443E-4 13 0.007288483954971774 2.2677299175394443E-5 0.0 9.070919670157777E-6 1.7688293356807664E-4 14 0.007297554874641931 3.1748218845552216E-5 0.0 9.070919670157777E-6 1.950247729083922E-4 15 0.007320232173817325 3.1748218845552216E-5 0.0 9.070919670157777E-6 2.0863115241362887E-4 16 0.007324767633652404 3.628367868063111E-5 0.0 9.070919670157777E-6 2.1770207208378662E-4 17 0.007338374013157641 3.628367868063111E-5 0.0 9.070919670157777E-6 2.267729917539444E-4 18 0.007338374013157641 4.0819138515709993E-5 0.0 9.070919670157777E-6 2.267729917539444E-4 19 0.007347444932827799 4.0819138515709993E-5 0.0 9.070919670157777E-6 2.4491483109426E-4 20 0.007356515852497957 4.5354598350788885E-5 0.0 1.3606379505236664E-5 2.585212105994966E-4 21 0.007370122232003193 4.5354598350788885E-5 0.0 1.3606379505236664E-5 2.6305667043457554E-4 22 0.00738372861150843 4.5354598350788885E-5 0.0 1.3606379505236664E-5 2.9480488928012774E-4 23 0.0073927995311785875 4.5354598350788885E-5 0.0 1.3606379505236664E-5 3.2201764829060107E-4 24 0.007433618669694298 4.989005818586777E-5 0.0 1.3606379505236664E-5 3.5376586713615327E-4 25 0.007451760509034613 4.989005818586777E-5 0.0 1.3606379505236664E-5 3.5376586713615327E-4 26 0.007492579647550323 5.896097785602555E-5 0.0 1.3606379505236664E-5 3.764431663115477E-4 27 0.007542469705736191 5.896097785602555E-5 0.0 1.3606379505236664E-5 3.809786261466266E-4 28 0.00758782430408698 5.896097785602555E-5 0.0 1.3606379505236664E-5 3.945850056518633E-4 29 0.007619572522932532 6.349643769110443E-5 0.0 1.8141839340315554E-5 4.1726230482725773E-4 30 0.007687604420458715 6.803189752618332E-5 0.0 1.8141839340315554E-5 4.3086868433249437E-4 31 0.007719352639304268 6.803189752618332E-5 0.0 3.1748218845552216E-5 4.3086868433249437E-4 32 0.007782849076995372 6.803189752618332E-5 0.0 3.1748218845552216E-5 4.3540414416757325E-4 33 0.007869022813861872 7.256735736126222E-5 0.0 3.1748218845552216E-5 4.535459835078888E-4 34 0.007927983791717897 7.256735736126222E-5 0.0 3.1748218845552216E-5 4.535459835078888E-4 35 0.008018692988419474 7.71028171963411E-5 0.0 3.1748218845552216E-5 4.580814433429677E-4 36 0.00808218942611058 9.070919670157777E-5 0.0 3.628367868063111E-5 4.716878228482044E-4 37 0.00819557592198755 9.070919670157777E-5 0.0 4.0819138515709993E-5 4.8982966218852E-4 38 0.008313497877699602 1.0431557620681443E-4 0.0 4.0819138515709993E-5 5.034360416937566E-4 39 0.008467703512092284 1.0431557620681443E-4 4.5354598350788885E-6 4.0819138515709993E-5 5.034360416937566E-4 40 0.008594696387474492 1.0431557620681443E-4 4.5354598350788885E-6 4.5354598350788885E-5 5.125069613639144E-4 41 0.008721689262856701 1.0431557620681443E-4 4.5354598350788885E-6 4.5354598350788885E-5 5.215778810340722E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCAACGC 108055 0.0 42.74388 12 CAACGCA 108395 0.0 42.627155 13 AAGCAGT 107595 0.0 42.55533 1 AGTGGTA 107495 0.0 42.487793 5 GTGGTAT 107785 0.0 42.47595 6 GGTATCA 108265 0.0 42.38965 8 GTATCAA 108380 0.0 42.316483 9 AACGCAG 109240 0.0 42.265152 14 TGGTATC 108385 0.0 42.22997 7 ATCAACG 109335 0.0 42.228428 11 ACGCAGA 109450 0.0 42.169033 15 TATCAAC 110120 0.0 41.654243 10 CGCAGAG 111400 0.0 41.388695 16 AGAGTAC 109125 0.0 41.034824 19 CAGTGGT 112540 0.0 40.683357 4 AGCAGTG 113375 0.0 40.4314 2 GCAGTGG 114285 0.0 40.343884 3 CAGAGTA 112020 0.0 40.13167 18 GCAGAGT 113875 0.0 39.684303 17 GAGTACA 77395 0.0 39.339233 20 >>END_MODULE