SRR805297_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR805297_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18385741
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	951178	5.173454798476711	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAGT	46877	0.2549638875039086	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	37057	0.2015529316985375	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATC	34530	0.1878085849245891	No Hit
AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCAG	33572	0.18259802528492053	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	233585	43.5638	1
GTGGTAT	235285	43.1907	6
TCAACGC	235630	43.118874	12
AGTGGTA	235125	43.110046	5
CAACGCA	235855	43.07297	13
GTATCAA	235940	43.034565	9
GGTATCA	236005	43.026524	8
ACGCAGA	236295	42.988953	15
AACGCAG	236475	42.963844	14
TGGTATC	236425	42.963417	7
ATCAACG	236650	42.905453	11
CGCAGAG	237675	42.737453	16
TATCAAC	237975	42.694923	10
AGCAGTG	238830	42.608967	2
AGAGTAC	231120	42.583725	19
GCAGTGG	239185	42.513744	3
CAGTGGT	239280	42.45549	4
CAGAGTA	233180	42.311733	18
GCAGAGT	239565	42.202114	17
GAGTACT	116710	42.19497	20