##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805291_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 35658795 Sequences flagged as poor quality 0 Sequence length 53 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 36.68230979201625 37.0 37.0 37.0 37.0 37.0 2 36.69320676708229 37.0 37.0 37.0 37.0 37.0 3 38.32910758762319 39.0 39.0 39.0 38.0 39.0 4 38.472757562334905 39.0 39.0 39.0 38.0 39.0 5 38.55033376758805 39.0 39.0 39.0 38.0 39.0 6 38.569156641440074 39.0 39.0 39.0 38.0 39.0 7 38.576322671587754 39.0 39.0 39.0 38.0 39.0 8 39.51636621484265 40.0 40.0 40.0 39.0 40.0 9 39.42860803344588 40.0 40.0 40.0 38.0 40.0 10 39.47712475982433 40.0 40.0 40.0 39.0 40.0 11 39.45626970849688 40.0 40.0 40.0 39.0 40.0 12 39.45082594630581 40.0 40.0 40.0 39.0 40.0 13 39.51627170800359 40.0 40.0 40.0 39.0 40.0 14 39.50178941829078 40.0 40.0 40.0 39.0 40.0 15 39.45828304069165 40.0 40.0 40.0 39.0 40.0 16 39.46242633829887 40.0 40.0 40.0 39.0 40.0 17 39.4589621157978 40.0 40.0 40.0 39.0 40.0 18 39.43467632599475 40.0 40.0 40.0 39.0 40.0 19 39.4321551807906 40.0 40.0 40.0 39.0 40.0 20 39.393379024725874 40.0 40.0 40.0 39.0 40.0 21 39.367975586387594 40.0 40.0 40.0 38.0 40.0 22 39.319273772431174 40.0 40.0 40.0 38.0 40.0 23 39.3301136227402 40.0 40.0 40.0 38.0 40.0 24 39.255455771850954 40.0 40.0 40.0 38.0 40.0 25 39.26741130764514 40.0 40.0 40.0 38.0 40.0 26 39.261725164857644 40.0 40.0 40.0 38.0 40.0 27 39.236288270537464 40.0 40.0 40.0 38.0 40.0 28 39.1650592511609 40.0 40.0 40.0 38.0 40.0 29 39.162470773339365 40.0 40.0 40.0 38.0 40.0 30 39.1098018034541 40.0 40.0 40.0 38.0 40.0 31 39.09355167497948 40.0 40.0 40.0 38.0 40.0 32 39.098073841250105 40.0 40.0 40.0 38.0 40.0 33 39.043026019247144 40.0 40.0 40.0 38.0 40.0 34 39.005997622746364 40.0 40.0 40.0 37.0 40.0 35 39.005451109607044 40.0 40.0 40.0 37.0 40.0 36 38.990592811675214 40.0 40.0 40.0 37.0 40.0 37 38.928539957673834 40.0 40.0 40.0 37.0 40.0 38 38.87599628647014 40.0 40.0 40.0 37.0 40.0 39 38.852457717654225 40.0 40.0 40.0 37.0 40.0 40 38.93850622265839 40.0 40.0 40.0 37.0 40.0 41 38.945753270686794 40.0 40.0 40.0 37.0 40.0 42 38.91888539699673 40.0 40.0 40.0 37.0 40.0 43 38.91502550773239 40.0 40.0 40.0 37.0 40.0 44 38.83620781352819 40.0 40.0 40.0 36.0 40.0 45 38.803241808928206 40.0 39.0 40.0 36.0 40.0 46 38.72695299995415 40.0 39.0 40.0 36.0 40.0 47 38.692028320082045 40.0 39.0 40.0 36.0 40.0 48 38.612613802569605 40.0 39.0 40.0 35.0 40.0 49 38.54724241242588 40.0 39.0 40.0 35.0 40.0 50 38.4791826252121 40.0 39.0 40.0 35.0 40.0 51 38.3781230969807 40.0 38.0 40.0 35.0 40.0 52 38.25976259152896 40.0 38.0 40.0 35.0 40.0 53 38.058044558151785 40.0 38.0 40.0 35.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 0.0 10 1.0 11 9.0 12 18.0 13 61.0 14 209.0 15 602.0 16 1362.0 17 2283.0 18 3610.0 19 5431.0 20 7797.0 21 10620.0 22 15208.0 23 22097.0 24 30824.0 25 42359.0 26 55489.0 27 70737.0 28 88489.0 29 109661.0 30 133562.0 31 163765.0 32 200794.0 33 247638.0 34 318990.0 35 450604.0 36 693716.0 37 1308043.0 38 3867540.0 39 2.7807275E7 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 13.504769300252576 21.488314453699292 39.39787084785114 25.609045398196994 2 28.50124913082453 24.8444233743737 27.731110936306173 18.923216558495596 3 20.919669327020166 24.526353175983655 30.095974920072315 24.45800257692387 4 20.843449701539267 28.134430790496427 28.36261853492245 22.659500973041855 5 25.19291243576795 28.279598343129653 26.59346452957819 19.934024691524208 6 24.18119008227844 27.06797860107163 26.148645796920505 22.602185519729424 7 23.646076655142164 27.83025057352611 27.590121875963558 20.93355089536817 8 23.186420068316945 25.485075981956207 27.343921744972032 23.984582204754815 9 21.9172184590085 25.268506689583877 28.780178915187683 24.03409593621994 10 24.25707318489029 25.759061684501678 26.751133906796348 23.232731223811683 11 23.209892538432662 26.348161792904108 26.9699270544616 23.47201861420163 12 23.095460741171987 26.228698978751247 27.594067606603083 23.081772673473683 13 23.329585309879374 26.13779573875113 27.092000725206784 23.44061822616272 14 23.002103688585102 26.416826479974997 26.77797160560249 23.803098225837413 15 22.844437115724187 26.901657781761834 26.85599162843276 23.397913474081218 16 23.74726347314877 26.012382078530692 26.0570554893961 24.18329895892444 17 23.755292347932677 26.41748550392687 25.847828004283375 23.97939414385708 18 23.745496728086295 26.632032854727704 25.85779749427876 23.764672922907238 19 23.971379290859378 26.098949782234648 25.98154256194019 23.948128364965783 20 24.196740243185445 26.61362505379108 25.925777918182597 23.26385678484088 21 23.768040955954906 26.898407531718334 26.07918186803564 23.25436964429112 22 24.21329716834234 26.360988922929113 26.150709803850635 23.275004104877915 23 23.457912697274264 26.429089934194355 26.883622960338393 23.229374408192985 24 23.775820242944274 26.620989295908625 26.04223446137201 23.56095599977509 25 23.187530593784786 25.889725101479172 26.58287247227507 24.339871832460968 26 24.053193609038107 25.929117907657844 26.165446701157457 23.852241782146592 27 23.924215610763067 25.713106682376676 26.42626594645164 23.936411760408618 28 23.866378547003624 26.251417076768856 26.016627875395116 23.865576500832404 29 24.975796293733428 25.772250576610904 25.994341648392773 23.257611481262895 30 23.612811369537305 26.866482728875162 26.121477183959808 23.399228717627725 31 24.187704604151655 25.750687873777 26.370147953681556 23.69145956838979 32 23.727198297082108 26.491430795684483 25.878863825880828 23.90250708135258 33 24.12296040850511 25.846260368585085 25.93777215410672 24.093007068803082 34 24.00631877773772 26.0807074383753 25.842805400462915 24.07016838342406 35 24.148202428040545 26.364699087560307 26.025371861275737 23.46172662312341 36 23.5530617341388 26.775074704571484 25.946911554358472 23.72495200693125 37 23.969264805498895 25.98219878153482 26.51016109770395 23.538375315262336 38 23.67808558870259 26.266647540950277 25.874601202872956 24.180665667474184 39 24.096537754570786 25.716586889714023 26.539780718894175 23.647094636821013 40 23.624135364080587 25.73751861216847 26.091983758845466 24.546362264905476 41 24.643833309566407 25.890364494930353 25.99879777205035 23.467004423452895 42 23.90554420024569 25.734234709838066 26.863420370766878 23.496800719149373 43 23.614311700661787 26.312389411924887 26.484773251591932 23.5885256358214 44 23.578491645609446 25.767777626809877 26.914790586726223 23.73894014085445 45 24.064955083311144 25.756955612212916 26.01082005154689 24.167269252929046 46 23.741430410085364 26.07189334356363 25.946050616685167 24.24062562966584 47 23.983572636147688 25.75071591734942 26.037618489351644 24.228092957151244 48 24.094271833919233 25.821910134652615 25.890089667920634 24.193728363507518 49 23.657739976911728 26.163935152604008 26.54098098379376 23.637343886690505 50 24.150684284199734 25.82498090583263 25.999978406449237 24.0243564035184 51 23.945248290078226 25.806805866547087 26.487420564828394 23.76052527854629 52 23.6415279876956 26.206199620598507 26.535201203517957 23.617071188187936 53 23.74925737114785 25.933658162032675 26.03608450594026 24.280999960879214 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 600.0 1 471.5 2 343.0 3 320.5 4 298.0 5 367.5 6 437.0 7 511.0 8 806.5 9 1028.0 10 1527.5 11 2027.0 12 3274.5 13 4522.0 14 7707.0 15 10892.0 16 18400.0 17 25908.0 18 41317.5 19 56727.0 20 78320.5 21 99914.0 22 140777.5 23 181641.0 24 213714.0 25 292937.0 26 340087.0 27 397401.5 28 454716.0 29 534346.5 30 613977.0 31 703019.5 32 792062.0 33 898300.5 34 1004539.0 35 1135978.0 36 1267417.0 37 1405825.5 38 1544234.0 39 1711875.5 40 1879517.0 41 2032112.0 42 2321799.0 43 2458891.0 44 2534015.0 45 2609139.0 46 2644236.0 47 2679333.0 48 2688355.0 49 2697377.0 50 2692695.5 51 2688014.0 52 2628254.0 53 2568494.0 54 2436992.0 55 2305490.0 56 2257640.5 57 2209791.0 58 1979757.0 59 1431694.0 60 1113665.0 61 935682.5 62 757700.0 63 622249.0 64 486798.0 65 390096.5 66 293395.0 67 229076.0 68 164757.0 69 125213.0 70 85669.0 71 63516.5 72 41364.0 73 30390.5 74 19417.0 75 14606.0 76 6927.0 77 4059.0 78 2990.5 79 1922.0 80 1465.0 81 1008.0 82 725.0 83 442.0 84 344.5 85 247.0 86 201.0 87 155.0 88 109.0 89 63.0 90 61.5 91 60.0 92 46.0 93 23.0 94 14.0 95 11.0 96 8.0 97 6.5 98 5.0 99 4.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 53 3.5658795E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.858263231198485 #Duplication Level Percentage of deduplicated Percentage of total 1 67.68070977996828 31.714005145441032 2 16.802829327725206 15.747027993348988 3 6.134645822975646 8.623765464094953 4 3.0135943620144388 5.64847191549313 5 1.7334293027591363 4.0612743280680235 6 1.0601655271797925 2.980650920473982 7 0.7132296114910601 2.3394490615673464 8 0.4816707944354254 1.8056205501148523 9 0.3754693680189561 1.5834458233695585 >10 1.8396233066024035 15.473332611290298 >50 0.1160395412932545 3.703249444678959 >100 0.04556308087884946 3.900826750614029 >500 0.002484661637741227 0.7675197027247014 >1k 4.924570423743854E-4 0.3434950075017724 >5k 1.3263994550719076E-5 0.036191560726183215 >10k+ 3.979198299563329E-5 1.2716737204921222 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGATCTCGTATGCCGTCTTC 190531 0.5343169896795447 Illumina Paired End PCR Primer 2 (100% over 53bp) CGGAAGAGCGGTTCAGCAGGAATGCCGAGATCGGAAGAGCGGTTCAGCAGGAA 130771 0.36672860089635667 Illumina Paired End PCR Primer 2 (96% over 33bp) CGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGATCTCGTATGCCGTCTTCTG 49041 0.13752848350596256 Illumina Paired End PCR Primer 2 (100% over 53bp) >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0014133960499786938 0.0 0.0 5.608714484042436E-6 0.0 2 0.0038083171346648143 0.0 0.0 8.413071726063654E-6 0.0 3 0.003970969854702045 0.0 0.0 1.1217428968084872E-5 2.804357242021218E-6 4 0.004128013860255233 2.804357242021218E-6 0.0 1.9630500694148526E-5 2.804357242021218E-6 5 0.0169439264562922 2.804357242021218E-6 0.0 2.5239215178190963E-5 5.608714484042436E-6 6 0.02451569100974949 2.804357242021218E-6 0.0 2.5239215178190963E-5 5.608714484042436E-6 7 0.02580849969832127 2.804357242021218E-6 0.0 2.5239215178190963E-5 1.1217428968084872E-5 8 0.02631328400188509 2.804357242021218E-6 0.0 2.804357242021218E-5 1.1217428968084872E-5 9 0.026941460024097842 8.413071726063654E-6 0.0 3.3652286904254615E-5 1.1217428968084872E-5 10 0.027757527981526017 1.1217428968084872E-5 0.0 3.3652286904254615E-5 1.1217428968084872E-5 11 0.02896059723835312 1.1217428968084872E-5 0.0 3.3652286904254615E-5 1.1217428968084872E-5 12 0.03069088565668021 1.1217428968084872E-5 0.0 3.926100138829705E-5 1.1217428968084872E-5 13 0.03371117840633706 1.1217428968084872E-5 0.0 4.206535863031827E-5 1.1217428968084872E-5 14 0.03588455526890351 1.402178621010609E-5 0.0 4.486971587233949E-5 1.402178621010609E-5 15 0.041277334245310306 1.402178621010609E-5 0.0 4.767407311436071E-5 1.402178621010609E-5 16 0.045295978173126715 1.6826143452127308E-5 0.0 4.767407311436071E-5 1.9630500694148526E-5 17 0.05287896015555209 2.2434857936169745E-5 0.0 5.0478430356381926E-5 1.9630500694148526E-5 18 0.05723412695241104 2.2434857936169745E-5 0.0 5.0478430356381926E-5 1.9630500694148526E-5 19 0.0614855325313152 2.2434857936169745E-5 0.0 5.0478430356381926E-5 2.2434857936169745E-5 20 0.06708302958638955 2.2434857936169745E-5 0.0 5.0478430356381926E-5 2.5239215178190963E-5 21 0.07215330747996392 2.804357242021218E-5 0.0 5.0478430356381926E-5 3.08479296622334E-5 22 0.07933526637678026 3.08479296622334E-5 0.0 5.608714484042436E-5 3.08479296622334E-5 23 0.08986001910608589 3.3652286904254615E-5 0.0 6.16958593244668E-5 3.08479296622334E-5 24 0.10714888150314669 3.3652286904254615E-5 0.0 7.291328829255167E-5 3.08479296622334E-5 25 0.13521769313853707 3.3652286904254615E-5 0.0 8.132636001861533E-5 3.08479296622334E-5 26 0.18234491659070365 3.3652286904254615E-5 0.0 8.693507450265775E-5 3.08479296622334E-5 27 0.2943313143363369 3.3652286904254615E-5 5.608714484042436E-6 8.973943174467898E-5 3.3652286904254615E-5 28 0.7338890728079847 3.3652286904254615E-5 5.608714484042436E-6 9.254378898670019E-5 3.3652286904254615E-5 29 0.7419684260222478 3.6456644146275834E-5 5.608714484042436E-6 9.254378898670019E-5 3.3652286904254615E-5 30 0.7547142296872342 3.926100138829705E-5 5.608714484042436E-6 9.815250347074263E-5 3.3652286904254615E-5 31 0.774768188324928 4.206535863031827E-5 5.608714484042436E-6 1.0095686071276385E-4 3.3652286904254615E-5 32 0.7753991687043827 4.486971587233949E-5 5.608714484042436E-6 1.093699324388275E-4 3.6456644146275834E-5 33 0.7757469090023934 4.767407311436071E-5 5.608714484042436E-6 1.1217428968084873E-4 3.926100138829705E-5 34 0.776223649733537 5.3282787598403145E-5 5.608714484042436E-6 1.1217428968084873E-4 3.926100138829705E-5 35 0.7771631094096141 5.3282787598403145E-5 5.608714484042436E-6 1.1217428968084873E-4 4.206535863031827E-5 36 0.7776286327117896 5.889150208244558E-5 5.608714484042436E-6 1.1497864692286994E-4 4.486971587233949E-5 37 0.7781446344443215 6.16958593244668E-5 5.608714484042436E-6 1.1778300416489116E-4 4.486971587233949E-5 38 0.7785344401009625 6.450021656648802E-5 5.608714484042436E-6 1.1778300416489116E-4 4.767407311436071E-5 39 0.7789074196141513 6.450021656648802E-5 5.608714484042436E-6 1.1778300416489116E-4 4.767407311436071E-5 40 0.7793841603452949 6.450021656648802E-5 5.608714484042436E-6 1.1778300416489116E-4 4.767407311436071E-5 41 0.7799562492226673 6.730457380850923E-5 5.608714484042436E-6 1.1778300416489116E-4 4.767407311436071E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATGCCG 28760 0.0 33.011124 42 CTCGTAT 29100 0.0 32.536594 38 ACCGATC 29395 0.0 32.242046 32 CGTATGC 29685 0.0 31.95873 40 TCGTATG 29780 0.0 31.912022 39 ATGCCGT 29815 0.0 31.677507 43 TCTCGTA 30070 0.0 31.48703 37 GACCGAT 30255 0.0 31.473143 31 CCGATCT 30225 0.0 31.185608 33 CGATCTC 30685 0.0 30.77937 34 GCCGTCT 30775 0.0 30.712263 45 AGACCGA 31345 0.0 30.446163 30 ATCTCGT 31160 0.0 30.415756 36 GATCTCG 31195 0.0 30.389162 35 TGCCGTC 31145 0.0 30.332315 44 GAGACCG 31775 0.0 30.063728 29 CGAGACC 31910 0.0 29.980724 28 GTATGCC 32010 0.0 29.776943 41 CCGTCTT 33000 0.0 28.74121 46 CCGAGAC 33515 0.0 28.678204 27 >>END_MODULE