##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805288_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 13488030 Sequences flagged as poor quality 0 Sequence length 53 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 34.593312737293736 37.0 35.0 37.0 28.0 37.0 2 35.761124345067444 37.0 35.0 37.0 33.0 37.0 3 37.89233765049455 39.0 38.0 39.0 35.0 39.0 4 38.08634359502462 39.0 39.0 39.0 37.0 39.0 5 38.11232707815745 39.0 39.0 39.0 37.0 39.0 6 38.09937018230238 39.0 39.0 39.0 37.0 39.0 7 38.10469823984674 39.0 39.0 39.0 37.0 39.0 8 39.036577543199414 40.0 40.0 40.0 37.0 40.0 9 39.05335723600852 40.0 40.0 40.0 37.0 40.0 10 39.01274018518642 40.0 40.0 40.0 37.0 40.0 11 39.09555376137212 40.0 40.0 40.0 37.0 40.0 12 39.10774827754683 40.0 40.0 40.0 37.0 40.0 13 39.13604040026601 40.0 40.0 40.0 38.0 40.0 14 39.08796888796955 40.0 40.0 40.0 37.0 40.0 15 39.063404144267174 40.0 40.0 40.0 37.0 40.0 16 39.04135874549508 40.0 40.0 40.0 37.0 40.0 17 38.9808175841839 40.0 40.0 40.0 37.0 40.0 18 38.93645469353197 40.0 40.0 40.0 37.0 40.0 19 38.91517812460381 40.0 40.0 40.0 37.0 40.0 20 38.86408319079955 40.0 40.0 40.0 37.0 40.0 21 38.845829598540334 40.0 40.0 40.0 37.0 40.0 22 38.79584527911044 40.0 40.0 40.0 37.0 40.0 23 38.785031246223504 40.0 40.0 40.0 36.0 40.0 24 38.806335988279976 40.0 40.0 40.0 37.0 40.0 25 38.78585605162503 40.0 40.0 40.0 36.0 40.0 26 38.79149230836527 40.0 40.0 40.0 36.0 40.0 27 38.78218375848808 40.0 40.0 40.0 36.0 40.0 28 38.75578086644232 40.0 40.0 40.0 36.0 40.0 29 38.70571365870331 40.0 40.0 40.0 36.0 40.0 30 38.653698130861216 40.0 39.0 40.0 36.0 40.0 31 38.65519923962209 40.0 39.0 40.0 36.0 40.0 32 38.64837251993063 40.0 39.0 40.0 36.0 40.0 33 38.201321764557164 40.0 39.0 40.0 35.0 40.0 34 38.41482247592866 40.0 39.0 40.0 35.0 40.0 35 38.48675499683794 40.0 39.0 40.0 35.0 40.0 36 38.464158813407145 40.0 39.0 40.0 35.0 40.0 37 38.430407331537666 40.0 39.0 40.0 35.0 40.0 38 38.308669538842956 40.0 38.0 40.0 35.0 40.0 39 38.306552773088434 40.0 38.0 40.0 35.0 40.0 40 38.2906528974209 40.0 38.0 40.0 35.0 40.0 41 38.26149660106035 40.0 38.0 40.0 35.0 40.0 42 38.1619760632205 40.0 38.0 40.0 35.0 40.0 43 38.093990745868744 40.0 38.0 40.0 35.0 40.0 44 37.99410499531807 40.0 38.0 40.0 34.0 40.0 45 37.52713361402666 40.0 38.0 40.0 33.0 40.0 46 37.70455515001079 40.0 38.0 40.0 33.0 40.0 47 37.74644948150323 40.0 38.0 40.0 34.0 40.0 48 37.67470334807974 40.0 37.0 40.0 34.0 40.0 49 37.67836274088951 40.0 37.0 40.0 34.0 40.0 50 37.635303079841904 40.0 37.0 40.0 34.0 40.0 51 37.649486099897466 40.0 37.0 40.0 34.0 40.0 52 37.56467764380714 40.0 37.0 40.0 34.0 40.0 53 37.16921492612339 39.0 36.0 40.0 33.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 17.0 11 31.0 12 74.0 13 146.0 14 290.0 15 634.0 16 1296.0 17 2042.0 18 3107.0 19 4288.0 20 5836.0 21 8093.0 22 11295.0 23 15704.0 24 21856.0 25 29514.0 26 39621.0 27 52258.0 28 68135.0 29 85824.0 30 107366.0 31 132870.0 32 161071.0 33 196183.0 34 246391.0 35 330279.0 36 469507.0 37 798522.0 38 1978513.0 39 8717262.0 >>END_MODULE >>Per base sequence content pass #Base G A T C 1 17.717598492885912 32.70836437937935 22.883304678296238 26.690732449438503 2 27.889699237027198 25.62987330247634 25.830035965222496 20.650391495273958 3 21.876901222787907 25.115068694242225 26.452239504212255 26.55579057875761 4 20.949642015920784 30.386438938822053 24.279653885704583 24.38426515955258 5 25.474268666365656 28.739993905707507 24.0262662523734 21.759471175553436 6 24.853955692565926 26.293231850759526 26.225223401786625 22.627589054887924 7 24.037735681192878 27.301147758419873 26.568868841483894 22.092247718903355 8 22.80833450103536 26.344217799041076 27.167859205532608 23.679588494390952 9 22.692253798367886 25.89415948807943 28.083367252297037 23.33021946125565 10 22.492498904584288 26.95277961273811 27.462134944836276 23.09258653784133 11 22.42642550468823 27.59291757209911 26.85956362789822 23.121093295314438 12 22.390897707078054 26.738115202887304 27.2598444695037 23.611142620530945 13 22.630028254682113 27.043652779538597 26.428603732346385 23.897715233432905 14 22.950008266588966 27.648633640346294 26.167601940387144 23.233756152677596 15 22.875290164686763 27.42056475259916 26.130732212191106 23.573412870522976 16 23.253892525446638 26.717697098835043 26.121079208750274 23.907331166968046 17 24.10945112073446 26.47190879616964 26.02030096315029 23.39833911994561 18 23.046338123506548 26.700541146483214 26.01012156704871 24.242999162961528 19 23.47777251385117 27.246973798249265 26.05087622136072 23.22437746653885 20 24.071254289914837 26.58381542745679 26.091482596049982 23.253447686578397 21 23.333748516277026 27.232308943559584 26.124763957375542 23.309178582787847 22 23.95307543058549 26.46102507186001 26.369306711209866 23.216592786344634 23 23.170559377462833 26.637611274589396 27.074072344145144 23.11775700380263 24 23.058178251382895 27.096054798217384 26.27075265995108 23.575014290448642 25 23.09389881250264 26.639479597836008 26.32303605493167 23.943585534729685 26 23.184786807265407 26.92677878088943 26.781205261257572 23.107229150587592 27 23.331309316482837 26.237901309531487 27.11938659685662 23.311402777129054 28 23.907561000383303 26.385728679429093 26.537685636820203 23.1690246833674 29 24.0214619925964 26.357911422201756 26.48159145553502 23.139035129666823 30 23.862187435822726 26.28426834756447 26.463026846767097 23.390517369845707 31 23.59613672270895 26.53198428532558 26.50108281194511 23.37079618002036 32 23.570944014804237 26.598205964844386 26.56596997485919 23.26488004549219 33 23.726452269160138 26.380753898085935 26.517727199598458 23.375066633155473 34 23.51301116619699 26.66507266072214 26.463634793220358 23.358281379860514 35 23.50772499764606 26.60367006894261 26.51187756848109 23.37672736493024 36 23.4684679675238 26.51247068697208 26.534282619478162 23.484778726025965 37 23.43480849316023 26.7086965257343 26.491192561107884 23.365302419997583 38 23.57150006338954 26.574384843450083 26.543409230258234 23.310705862902143 39 23.47695697592606 26.50553861460866 26.566155324387626 23.45134908507766 40 23.43111633055383 26.627320668770754 26.547101392864636 23.394461607810776 41 23.49645574631729 26.52591964875523 26.604685784358427 23.372938820569054 42 23.50366954996393 26.461010243897736 26.60623530641613 23.4290848997222 43 23.46525029971019 26.592519441312035 26.566956034350458 23.37527422462732 44 23.51748179682281 26.471197053980454 26.609475216173156 23.401845933023576 45 23.529396064510532 26.363316214450887 26.506057593288272 23.60123012775031 46 23.47869926149334 26.517823581353245 26.544424945674056 23.459052211479364 47 23.55306149230095 26.47010719875327 26.583348346645135 23.393482962300645 48 23.51687385036955 26.399429716570914 26.539783793482073 23.543912639577464 49 23.48946436210477 26.568483314464753 26.466392794203454 23.475659529227023 50 23.59736002959661 26.517386156466138 26.508652486686344 23.376601327250903 51 23.550770572129508 26.383393275370832 26.52023312522288 23.54560302727678 52 23.516577291124054 26.53579507163018 26.45023031532403 23.497397321921735 53 23.708414053052966 26.47274657603816 26.451453622211694 23.367385748697178 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 169.0 1 149.0 2 129.0 3 129.5 4 130.0 5 148.5 6 167.0 7 213.5 8 384.5 9 509.0 10 815.5 11 1122.0 12 1821.0 13 2520.0 14 4122.5 15 5725.0 16 9063.5 17 12402.0 18 19619.5 19 26837.0 20 36372.5 21 45908.0 22 73486.0 23 101064.0 24 106570.0 25 130737.0 26 149398.0 27 172974.0 28 196550.0 29 226360.5 30 256171.0 31 290473.5 32 324776.0 33 363948.0 34 403120.0 35 452091.0 36 501062.0 37 551411.0 38 601760.0 39 656867.5 40 711975.0 41 761672.0 42 859592.0 43 907815.0 44 936819.0 45 965823.0 46 982142.5 47 998462.0 48 1002006.5 49 1005551.0 50 1000083.0 51 994615.0 52 970282.0 53 945949.0 54 899335.0 55 852721.0 56 795926.0 57 739131.0 58 663176.5 59 512370.5 60 437519.0 61 374238.0 62 310957.0 63 258346.5 64 205736.0 65 166420.5 66 127105.0 67 99788.0 68 72471.0 69 55007.0 70 37543.0 71 27892.0 72 18241.0 73 13337.5 74 8434.0 75 6217.5 76 2805.5 77 1610.0 78 1181.0 79 752.0 80 605.0 81 458.0 82 353.0 83 248.0 84 212.5 85 177.0 86 139.5 87 102.0 88 77.5 89 53.0 90 49.5 91 46.0 92 41.5 93 28.5 94 20.0 95 21.5 96 23.0 97 15.5 98 8.0 99 4.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 53 1.348803E7 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.570289467830406 #Duplication Level Percentage of deduplicated Percentage of total 1 77.18917353682895 47.52559758445153 2 13.01621152801697 16.028238231090324 3 4.264002810105075 7.876076619294355 4 1.9483494387571243 4.798417557150443 5 0.9906957754130457 3.0498712833368966 6 0.5858445118080235 2.164236970509588 7 0.3991101949154624 1.7201331161355065 8 0.2805966763187291 1.3821134867724212 9 0.21069639976521287 1.1675374491036485 >10 1.0622581016269812 11.367339265831673 >50 0.041918090840967245 1.7303497193160253 >100 0.011033889346958608 0.9677580654363074 >500 8.492377523502212E-5 0.03809552561842157 >1k 1.20612406042925E-5 0.035103367341673436 >5k 0.0 0.0 >10k+ 1.2061240604292497E-5 0.14913175861127265 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20082 0.14888756920024643 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.520753586698725E-4 0.0 0.0 0.0 0.0 2 2.520753586698725E-4 0.0 0.0 0.0 0.0 3 2.520753586698725E-4 0.0 0.0 0.0 0.0 4 2.520753586698725E-4 0.0 0.0 0.0 0.0 5 2.5948933980722165E-4 0.0 0.0 7.41398113734919E-6 0.0 6 2.5948933980722165E-4 0.0 0.0 7.41398113734919E-6 0.0 7 2.5948933980722165E-4 0.0 0.0 7.41398113734919E-6 0.0 8 2.5948933980722165E-4 0.0 0.0 1.482796227469838E-5 0.0 9 2.5948933980722165E-4 0.0 0.0 2.2241943412047572E-5 0.0 10 2.7431730208192E-4 0.0 0.0 2.2241943412047572E-5 0.0 11 2.965592454939676E-4 0.0 0.0 2.2241943412047572E-5 0.0 12 2.965592454939676E-4 0.0 0.0 2.2241943412047572E-5 0.0 13 3.929410002795071E-4 0.0 0.0 2.2241943412047572E-5 0.0 14 4.3001090596625307E-4 0.0 0.0 2.2241943412047572E-5 0.0 15 4.967367362023957E-4 0.0 0.0 2.965592454939676E-5 0.0 16 5.4863460416384E-4 7.41398113734919E-6 0.0 2.965592454939676E-5 0.0 17 5.708765475758876E-4 7.41398113734919E-6 0.0 3.706990568674595E-5 0.0 18 6.969142269108239E-4 7.41398113734919E-6 0.0 3.706990568674595E-5 0.0 19 7.41398113734919E-4 7.41398113734919E-6 0.0 3.706990568674595E-5 0.0 20 8.007099628337125E-4 7.41398113734919E-6 0.0 3.706990568674595E-5 0.0 21 8.526078307951569E-4 7.41398113734919E-6 0.0 3.706990568674595E-5 0.0 22 9.119196798939505E-4 1.482796227469838E-5 0.0 3.706990568674595E-5 0.0 23 9.638175478553948E-4 1.482796227469838E-5 0.0 3.706990568674595E-5 0.0 24 0.001015715415816839 1.482796227469838E-5 0.0 3.706990568674595E-5 0.0 25 0.001089855227190331 1.482796227469838E-5 0.0 5.189786796144433E-5 7.41398113734919E-6 26 0.0011417530951517753 1.482796227469838E-5 0.0 5.189786796144433E-5 7.41398113734919E-6 27 0.0012677907744867115 1.482796227469838E-5 0.0 5.189786796144433E-5 1.482796227469838E-5 28 0.0013864144726842987 1.482796227469838E-5 0.0 5.931184909879352E-5 1.482796227469838E-5 29 0.001638489831354171 1.482796227469838E-5 0.0 5.931184909879352E-5 1.482796227469838E-5 30 0.001712629642727663 1.482796227469838E-5 0.0 5.931184909879352E-5 1.482796227469838E-5 31 0.0018831512088866944 1.482796227469838E-5 0.0 5.931184909879352E-5 1.482796227469838E-5 32 0.0020388448127710273 1.482796227469838E-5 0.0 8.155379251084109E-5 2.2241943412047572E-5 33 0.0022316083223421065 1.482796227469838E-5 0.0 8.155379251084109E-5 2.2241943412047572E-5 34 0.0024688557187372805 1.482796227469838E-5 0.0 8.155379251084109E-5 2.2241943412047572E-5 35 0.002698689133995105 2.2241943412047572E-5 0.0 9.638175478553947E-5 2.2241943412047572E-5 36 0.0029136945869782317 2.2241943412047572E-5 0.0 1.1120971706023786E-4 2.2241943412047572E-5 37 0.003188011889060152 2.2241943412047572E-5 0.0 1.2603767933493625E-4 2.2241943412047572E-5 38 0.003469743172279421 2.2241943412047572E-5 0.0 1.2603767933493625E-4 2.2241943412047572E-5 39 0.003781130380048087 2.965592454939676E-5 0.0 1.4086564160963462E-4 2.2241943412047572E-5 40 0.00402579175758061 2.965592454939676E-5 0.0 1.482796227469838E-4 2.2241943412047572E-5 41 0.004366834889898673 2.965592454939676E-5 0.0 1.55693603884333E-4 2.2241943412047572E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGCAGT 17570 0.0 29.35828 1 TCAACGC 18840 0.0 27.341825 12 ATCAACG 19045 0.0 27.084538 11 CAACGCA 19020 0.0 27.05836 13 AGTGGTA 19400 0.0 26.467783 5 GGTATCA 19480 0.0 26.274641 8 AACGCAG 19750 0.0 26.141518 14 ACGCAGA 19885 0.0 25.881315 15 GTATCAA 19855 0.0 25.825735 9 GTGGTAT 19990 0.0 25.63957 6 TATCAAC 20120 0.0 25.532307 10 CGCAGAG 20420 0.0 25.203232 16 CTCGTAT 1390 0.0 24.683453 12 TGGTATC 20870 0.0 24.535936 7 AGAGTAC 20790 0.0 24.40428 19 GATCGGA 1415 0.0 24.24735 1 CAGTGGT 23005 0.0 22.401869 4 GCTCGTA 1540 0.0 22.279222 11 CAGAGTA 22940 0.0 22.270706 18 GCAGTGG 23580 0.0 22.005089 3 >>END_MODULE