##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR805276_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 39894663 Sequences flagged as poor quality 0 Sequence length 53 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 35.83747846171805 37.0 35.0 37.0 35.0 37.0 2 35.94031823254153 37.0 35.0 37.0 35.0 37.0 3 37.73310299675924 39.0 37.0 39.0 35.0 39.0 4 37.70083281565757 39.0 37.0 39.0 35.0 39.0 5 37.663700881493845 39.0 37.0 39.0 35.0 39.0 6 37.572907884946915 39.0 37.0 39.0 35.0 39.0 7 37.58301841025703 39.0 37.0 39.0 35.0 39.0 8 38.519235367397386 40.0 38.0 40.0 36.0 40.0 9 38.44129429041674 40.0 38.0 40.0 35.0 40.0 10 38.331853436135056 40.0 38.0 40.0 35.0 40.0 11 38.33647041961478 40.0 38.0 40.0 35.0 40.0 12 38.26795127959848 40.0 38.0 40.0 34.0 40.0 13 38.312120621247004 40.0 38.0 40.0 34.0 40.0 14 38.2557435314092 40.0 38.0 40.0 34.0 40.0 15 38.178706033937424 40.0 38.0 40.0 34.0 40.0 16 38.08961875426796 40.0 38.0 40.0 34.0 40.0 17 37.98802940132619 40.0 38.0 40.0 34.0 40.0 18 37.87164418458679 40.0 38.0 40.0 34.0 40.0 19 37.798992085733374 40.0 37.0 40.0 34.0 40.0 20 37.60892415609577 39.0 37.0 40.0 33.0 40.0 21 37.46429393325117 39.0 37.0 40.0 33.0 40.0 22 37.32242678676093 39.0 37.0 40.0 33.0 40.0 23 37.21243673621206 39.0 37.0 40.0 33.0 40.0 24 37.01873899774514 39.0 36.0 40.0 32.0 40.0 25 36.88636229362309 38.0 36.0 40.0 32.0 40.0 26 36.84648726071455 38.0 36.0 40.0 32.0 40.0 27 36.675132134842194 38.0 36.0 40.0 31.0 40.0 28 36.450336953592014 38.0 36.0 40.0 31.0 40.0 29 36.29134450891338 38.0 35.0 40.0 31.0 40.0 30 36.13223172232336 38.0 35.0 40.0 30.0 40.0 31 35.93070652081959 38.0 35.0 40.0 30.0 40.0 32 35.773829421744956 38.0 35.0 39.0 30.0 40.0 33 35.74671228580124 38.0 34.0 39.0 30.0 40.0 34 35.55111471927962 38.0 34.0 39.0 30.0 40.0 35 35.35812539637194 37.0 34.0 39.0 30.0 40.0 36 35.138714795009044 37.0 34.0 39.0 29.0 40.0 37 34.78219274593196 37.0 33.0 38.0 29.0 40.0 38 34.55639332007893 36.0 33.0 38.0 28.0 40.0 39 34.36113747846422 36.0 33.0 38.0 27.0 40.0 40 34.30642785477346 36.0 33.0 38.0 27.0 40.0 41 34.1178063341455 36.0 33.0 38.0 27.0 40.0 42 33.84269452282377 35.0 32.0 38.0 26.0 39.0 43 33.67695044823414 35.0 32.0 38.0 26.0 39.0 44 33.47055093559758 35.0 31.0 38.0 26.0 39.0 45 33.18608802385422 35.0 31.0 38.0 25.0 39.0 46 33.023879835756475 35.0 31.0 38.0 24.0 39.0 47 32.600845456446145 34.0 31.0 37.0 24.0 39.0 48 32.320740571238815 34.0 30.0 37.0 24.0 39.0 49 32.144817365671194 34.0 30.0 37.0 23.0 38.0 50 31.858619334621274 34.0 29.0 37.0 23.0 38.0 51 31.51624551885549 33.0 29.0 37.0 22.0 38.0 52 30.96256749931689 33.0 28.0 36.0 21.0 38.0 53 33.10804836225838 35.0 31.0 38.0 24.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 4.0 9 19.0 10 28.0 11 68.0 12 135.0 13 310.0 14 714.0 15 1582.0 16 3029.0 17 6332.0 18 12242.0 19 22439.0 20 38785.0 21 61869.0 22 94191.0 23 135623.0 24 188261.0 25 250100.0 26 323660.0 27 409009.0 28 509148.0 29 629774.0 30 775156.0 31 963807.0 32 1223214.0 33 1618426.0 34 2284637.0 35 3681121.0 36 6899135.0 37 1.1135677E7 38 8066562.0 39 559603.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.538468366056883 44.49454053540946 16.14285349396234 16.82413760457132 2 22.75443209032747 35.44319950766347 29.10099779511861 12.70137060689045 3 22.880015304302734 28.14527096017831 30.884116003185692 18.09059773233327 4 17.788973427347916 32.6134701275707 26.122930277666462 23.474626167414925 5 19.2296022152136 36.824276470263705 25.272448096628864 18.673673217893832 6 24.136606944141878 28.75773383522503 29.70614891520703 17.399510305426066 7 17.73907452232395 31.08911585492024 32.2118600174665 18.95994960528931 8 23.442473997085774 28.12455640996391 29.232223367822407 19.200746225127908 9 23.929188222494822 29.18762091059649 29.247538699599996 17.635652167308695 10 17.832836437294883 30.85380618455155 33.90135166701371 17.41200571113986 11 18.634815890035217 35.21087269242004 28.534252814718602 17.62005860282615 12 18.0477022703513 29.056673570597653 35.1667640355804 17.72886012347065 13 18.279515232400886 30.198222253437763 27.662514657662356 23.859747856499 14 18.857402054004066 34.8846260463461 28.047190171778112 18.21078172787172 15 18.111969011995413 35.096351108417686 28.62458319299501 18.16709668659189 16 18.8377503025906 29.58561148893525 27.304263730715057 24.272374477759094 17 25.275333194317245 28.48216063386724 28.077898539962604 18.16460763185291 18 19.107387872909214 28.91545919312566 28.038399522261916 23.938753411703214 19 19.09941938850317 35.64871321259187 26.80446755497095 18.44739984393401 20 25.546321822545536 28.905187142450607 27.315515862359835 18.23297517264402 21 19.14695707543638 34.52740533238744 28.217278085542418 18.108359506633757 22 24.820898975885573 29.549318413843977 27.368630736396998 18.261151873873455 23 19.230499578352124 28.649436141370586 33.81085835967583 18.30920592060146 24 18.769723659528093 34.5903661349389 28.091030622316577 18.548879583216433 25 18.793360906445056 29.38246401529949 27.428052218413274 24.39612285984218 26 19.39787785649424 31.028812049371112 31.292000135456714 18.281309958677934 27 18.79691526658591 28.735933926801188 34.28346292836213 18.183687878250783 28 21.593382052130632 29.705587436595216 30.520034722438936 18.180995788835215 29 22.088042202537217 28.062628327002038 31.30490913032653 18.54442034013422 30 21.48202379852162 28.744012701648842 31.223983518797993 18.549979981031548 31 19.948843783941726 30.47539215959789 30.94273787950032 18.633026176960062 32 20.221451676380873 29.30872733528292 31.8068033310621 18.663017657274107 33 19.883647093346795 29.415343099902863 31.81549872974237 18.88551107700797 34 19.400853191816662 30.51813221232123 31.322204676851133 18.75880991901097 35 19.812697753581727 29.152383114503312 31.829838993752123 19.20508013816284 36 19.418645045328496 29.819637779619796 31.726361493516066 19.03535568153565 37 19.507165657722187 30.41420603051591 31.059427673320616 19.019200638441287 38 19.983958756588567 29.404116034267542 31.470329753130137 19.141595456013754 39 19.667044185835085 29.758509302359563 31.768417244181258 18.806029267624094 40 19.443214747797217 30.519926938598278 30.976148363504162 19.060709950100343 41 19.74406701969133 29.399335946264294 31.6605857781027 19.196011255941677 42 19.337724447001843 30.0411661579896 31.85638139116503 18.764728003843523 43 19.46803009715861 30.46308976215691 30.95808078388831 19.11079935679617 44 19.958218471478254 29.22552071689389 31.439305553226504 19.376955258401356 45 19.048931432256992 29.722750133269706 32.071442739095204 19.1568756953781 46 19.235164362711874 30.40096616432128 31.43808985176789 18.925779621198956 47 19.64681591620413 29.689467485914093 31.514380758148025 19.14933583973375 48 19.514332029825642 30.04833253009306 31.541299145702773 18.896036294378522 49 19.19083261838808 30.868462280280447 31.111068666001767 18.829636435329707 50 19.597305534326733 29.545195055288474 31.691905756917908 19.165593653466882 51 19.090435730714155 29.96185981067192 31.738683943764606 19.209020514849318 52 19.046231823038585 30.738469955241882 30.862682058499907 19.352616163219626 53 19.778394919641258 29.603095030530774 31.083107532453653 19.53540251737432 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 474024.0 1 265437.5 2 56851.0 3 39239.5 4 21628.0 5 17262.5 6 12897.0 7 11394.0 8 9603.0 9 9315.0 10 9603.5 11 9892.0 12 11244.0 13 12596.0 14 17209.5 15 21823.0 16 38888.5 17 55954.0 18 91417.0 19 126880.0 20 193251.0 21 259622.0 22 832394.0 23 1405166.0 24 1029081.5 25 800477.5 26 947958.0 27 1138749.5 28 1329541.0 29 1567300.5 30 1805060.0 31 2042840.0 32 2280620.0 33 2588856.0 34 2897092.0 35 3073643.0 36 3250194.0 37 3366409.0 38 3482624.0 39 3743372.0 40 4004120.0 41 3707710.5 42 3048375.5 43 2685450.0 44 2435927.0 45 2186404.0 46 2029100.5 47 1871797.0 48 1715881.5 49 1559966.0 50 1364450.0 51 1168934.0 52 1029587.5 53 890241.0 54 804803.5 55 719366.0 56 642813.0 57 566260.0 58 492634.5 59 374467.5 60 329926.0 61 311665.5 62 293405.0 63 272212.5 64 251020.0 65 220861.0 66 190702.0 67 151267.5 68 111833.0 69 85344.5 70 58856.0 71 42349.5 72 25843.0 73 17187.0 74 8531.0 75 6637.5 76 4157.5 77 3571.0 78 3362.5 79 3154.0 80 3312.0 81 3470.0 82 2821.0 83 2172.0 84 1560.0 85 948.0 86 659.0 87 370.0 88 325.0 89 280.0 90 237.5 91 195.0 92 152.0 93 68.5 94 28.0 95 26.0 96 24.0 97 16.0 98 8.0 99 4.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 53 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 53 3.9894663E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 10.636231265762017 #Duplication Level Percentage of deduplicated Percentage of total 1 67.99643853182246 7.232258454726353 2 14.454082622346123 3.074739310114106 3 6.454662228367949 2.0595984060990093 4 3.271135452272506 1.391702126880136 5 1.8744589786970238 0.9968589597802813 6 1.1762964222489423 0.7506816470476919 7 0.7781313678129198 0.579346962824136 8 0.5668199354162231 0.4823062335304992 9 0.41340259169834487 0.39573410140520865 >10 2.1400751586286555 4.121878998488457 >50 0.1892874696336212 1.410957192900704 >100 0.32097106961763466 8.820669521334686 >500 0.153780094163366 11.721004465367926 >1k 0.1961795493952916 42.942881741754654 >5k 0.013448380910202265 9.076282183417892 >10k+ 8.301469697655719E-4 4.9430996943284295 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 974652 2.443063624826208 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 445774 1.1173775299217343 No Hit AAGCAGTGGTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCC 60808 0.1524213902997501 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0527723971499647E-4 0.0 0.0 5.013201891190308E-6 2.506600945595154E-6 2 1.1029044160618677E-4 0.0 0.0 5.013201891190308E-6 2.506600945595154E-6 3 1.1279704255178192E-4 0.0 0.0 7.519802836785461E-6 2.506600945595154E-6 4 1.1279704255178192E-4 0.0 0.0 1.0026403782380616E-5 2.506600945595154E-6 5 1.1279704255178192E-4 0.0 0.0 1.5039605673570923E-5 2.506600945595154E-6 6 1.1781024444297224E-4 0.0 0.0 1.5039605673570923E-5 2.506600945595154E-6 7 1.1781024444297224E-4 0.0 0.0 1.7546206619166076E-5 2.506600945595154E-6 8 1.1781024444297224E-4 0.0 0.0 1.7546206619166076E-5 2.506600945595154E-6 9 1.30343249170948E-4 0.0 0.0 2.506600945595154E-5 2.506600945595154E-6 10 1.4538285484451893E-4 0.0 0.0 2.506600945595154E-5 2.506600945595154E-6 11 1.529026576813044E-4 0.0 0.0 2.7572610401546694E-5 2.506600945595154E-6 12 1.6543566240928017E-4 0.0 0.0 3.0079211347141846E-5 2.506600945595154E-6 13 1.9802147470201716E-4 0.0 0.0 3.0079211347141846E-5 2.506600945595154E-6 14 2.782327049610621E-4 0.0 0.0 3.759901418392731E-5 2.506600945595154E-6 15 3.1081851725379907E-4 0.0 0.0 3.759901418392731E-5 2.506600945595154E-6 16 3.860165456216537E-4 0.0 0.0 4.010561512952246E-5 2.506600945595154E-6 17 4.411617664247471E-4 0.0 0.0 4.010561512952246E-5 2.506600945595154E-6 18 5.038267900646259E-4 0.0 0.0 4.2612216075117615E-5 2.506600945595154E-6 19 5.740116165412903E-4 0.0 0.0 4.511881702071277E-5 2.506600945595154E-6 20 6.567294477459303E-4 0.0 0.0 4.7625417966307925E-5 2.506600945595154E-6 21 7.49473682732951E-4 0.0 0.0 5.013201891190308E-5 2.506600945595154E-6 22 8.346981148831862E-4 0.0 0.0 5.2638619857498236E-5 2.506600945595154E-6 23 9.324555517613972E-4 0.0 0.0 5.514522080309339E-5 2.506600945595154E-6 24 0.001057785599041155 0.0 0.0 6.015842269428369E-5 2.506600945595154E-6 25 0.0011705826415929369 0.0 0.0 6.5171624585474E-5 2.506600945595154E-6 26 0.001336018304002217 0.0 0.0 7.269142742225946E-5 5.013201891190308E-6 27 0.0014513219474995942 0.0 0.0 7.269142742225946E-5 5.013201891190308E-6 28 0.0016092378070720888 0.0 0.0 8.522443215023523E-5 5.013201891190308E-6 29 0.0017370744552974416 0.0 0.0 8.773103309583039E-5 5.013201891190308E-6 30 0.0018924837139243412 0.0 0.0 8.773103309583039E-5 5.013201891190308E-6 31 0.0020629325782248117 0.0 0.0 9.274423498702069E-5 5.013201891190308E-6 32 0.002163196616048618 0.0 0.0 9.525083593261585E-5 5.013201891190308E-6 33 0.002328632278457898 0.0 0.0 1.0277063876940131E-4 5.013201891190308E-6 34 0.00244142932100968 0.0 0.0 1.1279704255178192E-4 5.013201891190308E-6 35 0.002604358382473365 0.0 0.0 1.1530364349737708E-4 1.0026403782380616E-5 36 0.0027597676411002647 0.0 0.0 1.2282344633416254E-4 1.0026403782380616E-5 37 0.002930216505400735 0.0 0.0 1.2783664822535286E-4 1.0026403782380616E-5 38 0.003155810590504299 0.0 0.0 1.529026576813044E-4 1.0026403782380616E-5 39 0.0033337792576415546 0.0 0.0 1.7295546524606563E-4 1.7546206619166076E-5 40 0.0035092413238332156 0.0 0.0 1.7295546524606563E-4 1.7546206619166076E-5 41 0.0037724344231207067 0.0 0.0 1.7796866713725592E-4 1.7546206619166076E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGCAGT 243610 0.0 46.25239 1 CAGTGGT 251265 0.0 44.559887 4 GCAGTGG 254485 0.0 44.09673 3 GGTATCA 255115 0.0 43.80452 8 AGTGGTA 256380 0.0 43.64796 5 TCAACGC 258330 0.0 43.28119 12 ACGCAGA 257805 0.0 43.259037 15 CGCAGAG 257650 0.0 43.23216 16 CAACGCA 258795 0.0 43.18345 13 AACGCAG 260600 0.0 42.849174 14 GTATCAA 261400 0.0 42.78456 9 AGCAGTG 263980 0.0 42.67621 2 AGAGTAC 257975 0.0 42.519085 19 ATCAACG 263470 0.0 42.500153 11 GTACATG 115885 0.0 42.463654 22 GCAGAGT 262105 0.0 42.336853 17 AGTACAT 117595 0.0 42.293804 21 CAGAGTA 261290 0.0 42.253952 18 GTGGTAT 265660 0.0 42.13299 6 TGGTATC 269285 0.0 41.499493 7 >>END_MODULE